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PMC:2817507 / 614-829 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T285 194-195 -COMMA- denotes ,
T284 189-194 NN denotes blots
T283 181-188 JJ denotes Western
T282 179-180 -COMMA- denotes ,
T281 173-179 NN denotes Rt-PCR
T280 170-172 IN denotes by
T279 163-169 NN denotes tissue
T278 154-162 JJ denotes cerebral
T277 142-153 JJ denotes hemorrhagic
T276 139-141 IN denotes in
T275 130-138 VB denotes examined
T274 125-129 VB denotes were
T273 120-124 NN denotes NFκB
T272 117-119 IN denotes of
T271 108-116 NN denotes activity
T270 104-107 DT denotes the
T269 100-103 CC denotes and
T268 98-99 -COMMA- denotes ,
T267 97-98 -RRB- denotes )
T266 91-97 NN denotes p-IκBα
T265 90-91 -LRB- denotes (
T264 88-89 NN denotes B
T263 82-87 NN denotes kappa
T262 79-81 IN denotes of
T261 68-78 NN denotes inhibitors
T260 65-67 IN denotes of
T259 49-64 NN denotes phosphorylation
T258 45-48 DT denotes the
T257 43-44 -COMMA- denotes ,
T256 36-43 NN denotes protein
T255 32-35 CC denotes and
T254 27-31 NN denotes mRNA
T253 22-26 NN denotes TLR4
T252 17-20 NN denotes ICH
T251 11-16 IN denotes after
T250 6-10 NN denotes rats
R117 T250 T251 arg1Of rats,after
R118 T252 T251 arg2Of ICH,after
R119 T254 T255 arg1Of mRNA,and
R120 T255 T253 arg1Of and,TLR4
R121 T255 T257 arg1Of and,","
R122 T255 T269 arg1Of and,and
R123 T256 T255 arg2Of protein,and
R124 T259 T257 arg2Of phosphorylation,","
R125 T259 T258 arg1Of phosphorylation,the
R126 T259 T260 arg1Of phosphorylation,of
R127 T261 T260 arg2Of inhibitors,of
R128 T261 T262 arg1Of inhibitors,of
R129 T264 T262 arg2Of B,of
R130 T264 T263 arg1Of B,kappa
R131 T264 T265 arg1Of B,(
R132 T266 T265 arg2Of p-IκBα,(
R133 T267 T265 arg3Of ),(
R134 T269 T268 arg1Of and,","
R135 T269 T274 arg1Of and,were
R136 T269 T275 arg2Of and,examined
R137 T271 T269 arg2Of activity,and
R138 T271 T270 arg1Of activity,the
R139 T271 T272 arg1Of activity,of
R140 T273 T272 arg2Of NFκB,of
R141 T275 T274 arg2Of examined,were
R142 T275 T276 arg1Of examined,in
R143 T279 T276 arg2Of tissue,in
R144 T279 T277 arg1Of tissue,hemorrhagic
R145 T279 T278 arg1Of tissue,cerebral
R146 T281 T282 arg1Of Rt-PCR,","
R147 T282 T285 arg1Of ",",","
R148 T284 T282 arg2Of blots,","
R149 T284 T283 arg1Of blots,Western

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T96 22-26 Protein denotes TLR4
T97 68-89 Protein denotes inhibitors of kappa B
T98 93-97 Protein denotes IκBα

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T629 22-26 http://www.uniprot.org/uniprot/O00206 denotes TLR4

UBERON-AE

Id Subject Object Predicate Lexical cue
T62 163-169 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue

GO-BP

Id Subject Object Predicate Lexical cue
T117 36-64 http://purl.obolibrary.org/obo/GO_0006468 denotes protein, the phosphorylation
T118 49-64 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

simple1

Id Subject Object Predicate Lexical cue
T151 93-97 Protein denotes IκBα
T150 68-89 Protein denotes inhibitors of kappa B
T149 22-26 Protein denotes TLR4

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T734 49-64 Phosphorylation denotes phosphorylation
T729 93-97 Protein denotes IκBα
T728 68-89 Protein denotes inhibitors of kappa B
T727 22-26 Protein denotes TLR4
R510 T727 T734 themeOf TLR4,phosphorylation
R511 T728 T734 themeOf inhibitors of kappa B,phosphorylation

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T638 22-26 Protein denotes TLR4
T639 68-89 Protein denotes inhibitors of kappa B
T640 93-97 Protein denotes IκBα
T646 49-64 Phosphorylation denotes phosphorylation
R530 T638 T646 themeOf TLR4,phosphorylation
R531 T639 T646 themeOf inhibitors of kappa B,phosphorylation

DLUT931

Id Subject Object Predicate Lexical cue
T690 49-64 Phosphorylation denotes phosphorylation
T685 93-97 Protein denotes IκBα
T684 68-89 Protein denotes inhibitors of kappa B
T683 22-26 Protein denotes TLR4
R492 T683 T690 themeOf TLR4,phosphorylation
R493 T684 T690 themeOf inhibitors of kappa B,phosphorylation
R494 T685 T690 themeOf IκBα,phosphorylation

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T764 117-124 Protein denotes of NFκB
T759 176-179 Protein denotes PCR
T758 91-97 Protein denotes p-IκBα
T754 36-43 Protein denotes protein
T752 68-99 Protein denotes inhibitors of kappa B (p-IκBα),
T747 22-26 Protein denotes TLR4
T742 22-31 Protein denotes TLR4 mRNA

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T520 194-195 , denotes ,
T519 189-194 NNS denotes blots
T518 181-188 NNP denotes Western
T517 179-180 , denotes ,
T516 173-179 NNP denotes Rt-PCR
T515 170-172 IN denotes by
T514 163-169 NN denotes tissue
T513 154-162 JJ denotes cerebral
T512 142-153 JJ denotes hemorrhagic
T511 139-141 IN denotes in
T510 130-138 VBN denotes examined
T509 125-129 VBD denotes were
T508 120-124 NNP denotes NFκB
T507 117-119 IN denotes of
T506 108-116 NN denotes activity
T505 104-107 DT denotes the
T504 100-103 CC denotes and
T503 98-99 , denotes ,
T502 97-98 -RRB- denotes )
T501 91-97 NNP denotes p-IκBα
T500 90-91 -LRB- denotes (
T499 88-89 NNP denotes B
T498 82-87 NN denotes kappa
T497 79-81 IN denotes of
T496 68-78 NNS denotes inhibitors
T495 65-67 IN denotes of
T494 49-64 NN denotes phosphorylation
T493 45-48 DT denotes the
T492 43-44 , denotes ,
T491 36-43 NN denotes protein
T490 32-35 CC denotes and
T489 27-31 NNP denotes mRNA
T488 22-26 CD denotes TLR4
T487 20-21 . denotes .
T486 17-20 NNP denotes ICH
T485 11-16 IN denotes after
T484 6-10 NNS denotes rats
R353 T486 T485 pobj ICH,after
R355 T488 T489 nummod TLR4,mRNA
R356 T489 T510 nsubjpass mRNA,examined
R357 T490 T489 cc and,mRNA
R358 T491 T489 conj protein,mRNA
R359 T492 T491 punct ",",protein
R360 T493 T494 det the,phosphorylation
R361 T494 T491 appos phosphorylation,protein
R362 T495 T494 prep of,phosphorylation
R363 T496 T495 pobj inhibitors,of
R364 T497 T496 prep of,inhibitors
R365 T498 T499 compound kappa,B
R366 T499 T497 pobj B,of
R367 T500 T499 punct (,B
R368 T501 T499 appos p-IκBα,B
R369 T502 T499 punct ),B
R370 T503 T494 punct ",",phosphorylation
R371 T504 T494 cc and,phosphorylation
R372 T505 T506 det the,activity
R373 T506 T494 conj activity,phosphorylation
R374 T507 T506 prep of,activity
R375 T508 T507 pobj NFκB,of
R376 T509 T510 auxpass were,examined
R377 T510 T510 ROOT examined,examined
R378 T511 T510 prep in,examined
R379 T512 T514 amod hemorrhagic,tissue
R380 T513 T514 amod cerebral,tissue
R381 T514 T511 pobj tissue,in
R382 T515 T510 agent by,examined
R383 T516 T515 pobj Rt-PCR,by
R384 T517 T516 punct ",",Rt-PCR
R385 T518 T519 amod Western,blots
R386 T519 T510 npadvmod blots,examined
R387 T520 T519 punct ",",blots

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T134 130-138 Positive_regulation denotes examined
T133 130-138 Positive_regulation denotes examined
T132 49-64 Phosphorylation denotes phosphorylation
T131 120-124 Protein denotes NFκB
T130 22-31 Protein denotes TLR4 mRNA
R21 T132 T134 themeOf phosphorylation,examined
R19 T130 T132 themeOf TLR4 mRNA,phosphorylation
R20 T130 T133 themeOf TLR4 mRNA,examined

testone

Id Subject Object Predicate Lexical cue
T21 93-97 Protein denotes IκBα
T20 68-89 Protein denotes inhibitors of kappa B
T19 22-26 Protein denotes TLR4
R3 T21 T20 equivalentTo IκBα,inhibitors of kappa B

test3

Id Subject Object Predicate Lexical cue
T37 93-97 Protein denotes IκBα
T36 68-89 Protein denotes inhibitors of kappa B
T35 22-26 Protein denotes TLR4
T50 93-97 Protein denotes IκBα
T49 68-89 Protein denotes inhibitors of kappa B
T48 22-26 Protein denotes TLR4
R6 T50 T49 equivalentTo IκBα,inhibitors of kappa B