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PMC:2817507 / 183-359 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T208 170-175 NN denotes brain
T207 162-169 JJ denotes injured
T206 159-161 IN denotes in
T205 149-158 NN denotes responses
T204 136-148 JJ denotes inflammatory
T203 133-135 IN denotes of
T202 122-132 NN denotes regulation
T201 118-121 CC denotes and
T200 107-117 NN denotes activation
T199 103-106 DT denotes the
T198 100-102 IN denotes in
T197 94-99 NN denotes roles
T196 85-93 JJ denotes critical
T195 79-84 VB denotes plays
T194 69-78 NN denotes signaling
T193 67-68 -RRB- denotes )
T192 63-67 NN denotes NFκB
T191 62-63 -LRB- denotes (
T190 54-61 NN denotes kappa-B
T189 47-53 NN denotes factor
T188 39-46 JJ denotes nuclear
T187 30-38 VB denotes mediated
T186 28-29 -RRB- denotes )
T185 23-28 NN denotes TLR4-
T184 22-23 -LRB- denotes (
T183 19-21 NN denotes 4-
T182 10-18 NN denotes receptor
T181 0-9 JJ denotes Toll-like
R49 T183 T181 arg1Of 4-,Toll-like
R50 T183 T182 arg1Of 4-,receptor
R51 T183 T184 arg1Of 4-,(
R52 T185 T184 arg2Of TLR4-,(
R53 T186 T184 arg3Of ),(
R54 T192 T191 arg2Of NFκB,(
R55 T193 T191 arg3Of ),(
R56 T194 T183 arg1Of signaling,4-
R57 T194 T187 arg2Of signaling,mediated
R58 T194 T188 arg1Of signaling,nuclear
R59 T194 T189 arg1Of signaling,factor
R60 T194 T190 arg1Of signaling,kappa-B
R61 T194 T191 arg1Of signaling,(
R62 T194 T195 arg1Of signaling,plays
R63 T195 T198 arg1Of plays,in
R64 T197 T195 arg2Of roles,plays
R65 T197 T196 arg1Of roles,critical
R66 T200 T201 arg1Of activation,and
R67 T201 T198 arg2Of and,in
R68 T201 T199 arg1Of and,the
R69 T201 T203 arg1Of and,of
R70 T201 T206 arg1Of and,in
R71 T202 T201 arg2Of regulation,and
R72 T205 T203 arg2Of responses,of
R73 T205 T204 arg1Of responses,inflammatory
R74 T208 T206 arg2Of brain,in
R75 T208 T207 arg1Of brain,injured

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T91 0-20 Protein denotes Toll-like receptor 4
T92 23-27 Protein denotes TLR4

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T625 23-27 http://www.uniprot.org/uniprot/O00206 denotes TLR4

UBERON-AE

Id Subject Object Predicate Lexical cue
T57 170-175 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain

GO-BP

Id Subject Object Predicate Lexical cue
T103 136-158 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammatory responses
T107 69-78 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T111 122-132 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T112 122-158 http://purl.obolibrary.org/obo/GO_0002676 denotes regulation of inflammatory responses
T113 122-158 http://purl.obolibrary.org/obo/GO_0050729 denotes regulation of inflammatory responses
T114 122-158 http://purl.obolibrary.org/obo/GO_0050727 denotes regulation of inflammatory responses
T115 122-158 http://purl.obolibrary.org/obo/GO_0050728 denotes regulation of inflammatory responses
T116 122-158 http://purl.obolibrary.org/obo/GO_0002673 denotes regulation of inflammatory responses

sentences

Id Subject Object Predicate Lexical cue
T65 0-176 Sentence denotes Toll-like receptor 4- (TLR4-) mediated nuclear factor kappa-B (NFκB) signaling plays critical roles in the activation and regulation of inflammatory responses in injured brain.
T4 0-176 Sentence denotes Toll-like receptor 4- (TLR4-) mediated nuclear factor kappa-B (NFκB) signaling plays critical roles in the activation and regulation of inflammatory responses in injured brain.

simple1

Id Subject Object Predicate Lexical cue
T145 23-27 Protein denotes TLR4
T144 0-20 Protein denotes Toll-like receptor 4

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T723 23-27 Protein denotes TLR4
T722 0-20 Protein denotes Toll-like receptor 4

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T633 0-20 Protein denotes Toll-like receptor 4
T634 23-27 Protein denotes TLR4

DLUT931

Id Subject Object Predicate Lexical cue
T679 23-27 Protein denotes TLR4
T678 0-20 Protein denotes Toll-like receptor 4

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T753 63-67 Protein denotes NFκB
T744 0-29 Protein denotes Toll-like receptor 4- (TLR4-)

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T441 175-176 . denotes .
T440 170-175 NN denotes brain
T439 162-169 JJ denotes injured
T438 159-161 IN denotes in
T437 149-158 NNS denotes responses
T436 136-148 JJ denotes inflammatory
T435 133-135 IN denotes of
T434 122-132 NN denotes regulation
T433 118-121 CC denotes and
T432 107-117 NN denotes activation
T431 103-106 DT denotes the
T430 100-102 IN denotes in
T429 94-99 NNS denotes roles
T428 85-93 JJ denotes critical
T427 79-84 NNS denotes plays
T426 69-78 VBG denotes signaling
T425 67-68 -RRB- denotes )
T424 63-67 NNP denotes NFκB
T423 62-63 -LRB- denotes (
T422 54-61 NN denotes kappa-B
T421 47-53 NN denotes factor
T420 39-46 JJ denotes nuclear
T419 30-38 VBN denotes mediated
T418 28-29 -RRB- denotes )
T417 27-28 : denotes -
T416 23-27 SYM denotes TLR4
T415 22-23 -LRB- denotes (
T414 20-21 : denotes -
T413 19-20 LS denotes 4
T412 10-18 NN denotes receptor
T411 0-9 JJ denotes Toll-like
R278 T411 T412 amod Toll-like,receptor
R279 T412 T412 ROOT receptor,receptor
R280 T413 T419 meta 4,mediated
R281 T414 T413 punct -,4
R282 T415 T419 punct (,mediated
R283 T416 T419 ccomp TLR4,mediated
R284 T417 T416 punct -,TLR4
R285 T418 T419 punct ),mediated
R286 T419 T422 amod mediated,kappa-B
R287 T420 T421 amod nuclear,factor
R288 T421 T422 compound factor,kappa-B
R289 T422 T412 appos kappa-B,receptor
R290 T423 T422 punct (,kappa-B
R291 T424 T422 appos NFκB,kappa-B
R292 T425 T422 punct ),kappa-B
R293 T426 T412 acl signaling,receptor
R294 T427 T426 dobj plays,signaling
R295 T428 T429 amod critical,roles
R296 T429 T427 dobj roles,plays
R297 T430 T427 prep in,plays
R298 T431 T432 det the,activation
R299 T432 T430 pobj activation,in
R300 T433 T432 cc and,activation
R301 T434 T432 conj regulation,activation
R302 T435 T434 prep of,regulation
R303 T436 T437 amod inflammatory,responses
R304 T437 T435 pobj responses,of
R305 T438 T437 prep in,responses
R306 T439 T440 amod injured,brain
R307 T440 T438 pobj brain,in
R308 T441 T412 punct .,receptor

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T123 63-67 Protein denotes NFκB
T122 39-61 Protein denotes nuclear factor kappa-B

testone

Id Subject Object Predicate Lexical cue
T15 23-27 Protein denotes TLR4
T14 0-20 Protein denotes Toll-like receptor 4
R1 T15 T14 equivalentTo TLR4,Toll-like receptor 4

test3

Id Subject Object Predicate Lexical cue
T31 23-27 Protein denotes TLR4
T30 0-20 Protein denotes Toll-like receptor 4
T43 23-27 Protein denotes TLR4
T42 0-20 Protein denotes Toll-like receptor 4
R4 T43 T42 equivalentTo TLR4,Toll-like receptor 4