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PMC:2817507 / 11257-12023 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T5734 441-445 VB denotes were
T5744 501-507 VB denotes showed
T5743 493-500 NN denotes Results
T5742 487-491 NN denotes EMSA
T5741 483-486 CC denotes and
T5740 477-482 NN denotes Blots
T5739 469-476 JJ denotes Western
T5738 466-468 IN denotes of
T5737 458-465 NN denotes methods
T5736 455-457 IN denotes by
T5735 446-454 VB denotes measured
T5733 436-440 NN denotes NFκB
T5732 433-435 IN denotes of
T5731 424-432 NN denotes activity
T5730 420-423 CC denotes and
T5729 418-419 -RRB- denotes )
T5728 413-418 NN denotes p-IκB
T5727 412-413 -LRB- denotes (
T5726 404-411 NN denotes kappa-B
T5725 401-403 IN denotes of
T5724 391-400 NN denotes inhibitor
T5723 388-390 IN denotes of
T5722 372-387 NN denotes phosphorylation
T5721 368-371 DT denotes the
T5720 366-367 -COMMA- denotes ,
T5719 357-366 NN denotes signaling
T5718 352-356 NN denotes NFκB
T5717 338-351 JJ denotes TLR4-mediated
T5716 335-337 IN denotes of
T5715 324-334 NN denotes activation
T5714 320-323 DT denotes the
T5713 312-319 VB denotes detectd
T5712 309-311 TO denotes To
T5711 298-307 NN denotes responses
T5710 285-297 JJ denotes inflammatory
T5709 282-284 TO denotes to
T5708 274-281 VB denotes related
T5707 268-273 NN denotes genes
T5706 265-267 IN denotes of
T5705 251-264 NN denotes transcription
T5704 247-250 DT denotes the
T5703 237-246 VB denotes regulates
T5702 233-236 CC denotes and
T5701 223-232 VB denotes activates
T5700 219-222 CC denotes and
T5699 211-218 NN denotes nucleus
T5698 207-210 DT denotes the
T5697 202-206 IN denotes into
T5696 189-201 VB denotes translocates
T5695 184-188 NN denotes NFκB
T5694 182-183 -COMMA- denotes ,
T5693 178-182 RB denotes Then
T5692 175-176 -RRB- denotes )
T5691 171-175 NN denotes NFκB
T5690 170-171 -LRB- denotes (
T5689 159-169 NN denotes NF-kappa-B
T5688 154-158 IN denotes with
T5687 150-153 NN denotes IκB
T5686 138-149 VB denotes dissociates
T5685 132-137 WDT denotes which
T5684 130-131 -COMMA- denotes ,
T5683 129-130 -RRB- denotes )
T5682 126-129 NN denotes IκB
T5681 125-126 -LRB- denotes (
T5680 117-124 NN denotes kappa-B
T5679 114-116 IN denotes of
T5678 104-113 NN denotes inhibitor
T5677 101-103 IN denotes of
T5676 85-100 NN denotes phosphorylation
T5675 81-84 DT denotes the
T5674 73-80 VB denotes induces
T5673 68-72 NN denotes TLR4
T5672 65-67 IN denotes of
T5671 54-64 NN denotes Activation
T5670 44-53 NN denotes Signaling
T5669 33-43 NN denotes NF-Kappa-B
T5668 19-32 JJ denotes TLR4-Mediated
T5667 16-18 IN denotes of
T5666 5-15 NN denotes Activation
T5665 0-3 CD denotes 3.4
T5806 764-765 -RRB- denotes )
T5805 763-764 CD denotes 4
T5804 756-762 NN denotes Figure
T5803 755-756 -LRB- denotes (
T5802 749-754 NN denotes p-IκB
T5801 745-748 DT denotes the
T5800 742-744 IN denotes of
T5799 737-741 DT denotes that
T5798 734-736 IN denotes as
T5797 727-733 NN denotes manner
T5796 722-726 JJ denotes same
T5795 718-721 DT denotes the
T5794 715-717 IN denotes in
T5793 705-714 VB denotes increased
T5792 700-704 RB denotes also
T5791 696-699 VB denotes was
T5790 691-695 NN denotes NFκB
T5789 688-690 IN denotes of
T5788 679-687 NN denotes activity
T5787 675-678 DT denotes the
T5786 673-674 -COMMA- denotes ,
T5785 665-673 VB denotes expected
T5784 662-664 IN denotes As
T5783 659-660 -RRB- denotes )
T5782 658-659 CD denotes 5
T5781 651-657 NNP denotes Figure
T5780 649-650 -COMMA- denotes ,
T5779 646-649 CD denotes .05
T5778 644-645 JJ denotes <
T5777 642-643 NN denotes P
T5776 641-642 -LRB- denotes (
T5775 637-640 NN denotes ICH
T5774 631-636 IN denotes after
T5773 626-630 NN denotes days
T5772 624-625 CD denotes 7
T5771 621-623 IN denotes on
T5770 615-620 NN denotes level
T5769 610-614 JJ denotes high
T5768 608-609 DT denotes a
T5767 597-607 VB denotes maintained
T5766 593-596 CC denotes and
T5765 591-592 -COMMA- denotes ,
T5764 588-591 NN denotes ICH
T5763 582-587 IN denotes after
T5762 577-581 NN denotes days
T5761 575-576 CD denotes 3
T5760 572-574 IN denotes on
T5759 565-571 VB denotes peaked
T5758 563-564 -COMMA- denotes ,
T5757 562-563 -RRB- denotes )
T5756 559-562 CD denotes .05
T5755 557-558 SYM denotes <
T5754 555-556 NN denotes P
T5753 554-555 -LRB- denotes (
T5752 550-553 NN denotes ICH
T5751 544-549 IN denotes after
T5750 536-543 NN denotes 6 hours
T5749 533-535 IN denotes at
T5748 523-532 VB denotes increased
T5747 517-522 NN denotes p-IκB
T5746 513-516 DT denotes the
T5745 508-512 IN denotes that
R4281 T5666 T5667 arg1Of Activation,of
R4282 T5670 T5667 arg2Of Signaling,of
R4283 T5670 T5668 arg1Of Signaling,TLR4-Mediated
R4284 T5670 T5669 arg1Of Signaling,NF-Kappa-B
R4285 T5671 T5672 arg1Of Activation,of
R4286 T5671 T5674 arg1Of Activation,induces
R4287 T5673 T5672 arg2Of TLR4,of
R4288 T5676 T5674 arg2Of phosphorylation,induces
R4289 T5676 T5675 arg1Of phosphorylation,the
R4290 T5676 T5677 arg1Of phosphorylation,of
R4291 T5678 T5677 arg2Of inhibitor,of
R4292 T5678 T5679 arg1Of inhibitor,of
R4293 T5680 T5679 arg2Of kappa-B,of
R4294 T5680 T5681 arg1Of kappa-B,(
R4295 T5680 T5684 arg1Of kappa-B,","
R4296 T5680 T5685 arg1Of kappa-B,which
R4297 T5680 T5686 arg1Of kappa-B,dissociates
R4298 T5682 T5681 arg2Of IκB,(
R4299 T5683 T5681 arg3Of ),(
R4300 T5687 T5686 arg2Of IκB,dissociates
R4301 T5687 T5688 arg1Of IκB,with
R4302 T5689 T5688 arg2Of NF-kappa-B,with
R4303 T5689 T5690 arg1Of NF-kappa-B,(
R4304 T5691 T5690 arg2Of NFκB,(
R4305 T5692 T5690 arg3Of ),(
R4306 T5695 T5696 arg1Of NFκB,translocates
R4307 T5695 T5701 arg1Of NFκB,activates
R4308 T5695 T5703 arg1Of NFκB,regulates
R4309 T5696 T5697 arg1Of translocates,into
R4310 T5696 T5700 arg1Of translocates,and
R4311 T5699 T5697 arg2Of nucleus,into
R4312 T5699 T5698 arg1Of nucleus,the
R4313 T5700 T5693 arg1Of and,Then
R4314 T5700 T5694 arg1Of and,","
R4315 T5701 T5702 arg1Of activates,and
R4316 T5702 T5700 arg2Of and,and
R4317 T5703 T5702 arg2Of regulates,and
R4318 T5705 T5701 arg2Of transcription,activates
R4319 T5705 T5703 arg2Of transcription,regulates
R4320 T5705 T5704 arg1Of transcription,the
R4321 T5705 T5706 arg1Of transcription,of
R4322 T5707 T5706 arg2Of genes,of
R4323 T5707 T5708 arg2Of genes,related
R4324 T5708 T5709 arg1Of related,to
R4325 T5711 T5709 arg2Of responses,to
R4326 T5711 T5710 arg1Of responses,inflammatory
R4327 T5713 T5712 arg1Of detectd,To
R4328 T5715 T5713 arg2Of activation,detectd
R4329 T5715 T5714 arg1Of activation,the
R4330 T5715 T5716 arg1Of activation,of
R4331 T5719 T5716 arg2Of signaling,of
R4332 T5719 T5717 arg1Of signaling,TLR4-mediated
R4333 T5719 T5718 arg1Of signaling,NFκB
R4334 T5722 T5721 arg1Of phosphorylation,the
R4335 T5722 T5723 arg1Of phosphorylation,of
R4336 T5722 T5734 arg1Of phosphorylation,were
R4337 T5722 T5735 arg2Of phosphorylation,measured
R4338 T5724 T5723 arg2Of inhibitor,of
R4339 T5724 T5725 arg1Of inhibitor,of
R4340 T5726 T5727 arg1Of kappa-B,(
R4341 T5726 T5730 arg1Of kappa-B,and
R4342 T5728 T5727 arg2Of p-IκB,(
R4343 T5729 T5727 arg3Of ),(
R4344 T5730 T5725 arg2Of and,of
R4345 T5731 T5730 arg2Of activity,and
R4346 T5731 T5732 arg1Of activity,of
R4347 T5733 T5732 arg2Of NFκB,of
R4348 T5735 T5712 modOf measured,To
R4349 T5735 T5720 arg1Of measured,","
R4350 T5735 T5734 arg2Of measured,were
R4351 T5737 T5735 arg1Of methods,measured
R4352 T5737 T5736 arg2Of methods,by
R4353 T5737 T5738 arg1Of methods,of
R4354 T5740 T5739 arg1Of Blots,Western
R4355 T5740 T5741 arg1Of Blots,and
R4356 T5741 T5738 arg2Of and,of
R4357 T5742 T5741 arg2Of EMSA,and
R4358 T5743 T5744 arg1Of Results,showed
R4359 T5747 T5746 arg1Of p-IκB,the
R4360 T5747 T5748 arg1Of p-IκB,increased
R4361 T5748 T5744 arg2Of increased,showed
R4362 T5748 T5745 arg1Of increased,that
R4363 T5748 T5749 arg1Of increased,at
R4364 T5748 T5751 arg1Of increased,after
R4365 T5750 T5749 arg2Of 6 hours,at
R4366 T5752 T5753 arg1Of ICH,(
R4367 T5752 T5759 arg1Of ICH,peaked
R4368 T5752 T5767 arg1Of ICH,maintained
R4369 T5754 T5753 arg2Of P,(
R4370 T5754 T5755 arg1Of P,<
R4371 T5755 T5756 arg1Of <,.05
R4372 T5757 T5753 arg3Of ),(
R4373 T5759 T5760 arg1Of peaked,on
R4374 T5759 T5763 arg1Of peaked,after
R4375 T5759 T5766 arg1Of peaked,and
R4376 T5762 T5760 arg2Of days,on
R4377 T5762 T5761 arg1Of days,3
R4378 T5764 T5763 arg2Of ICH,after
R4379 T5766 T5751 arg2Of and,after
R4380 T5766 T5758 arg1Of and,","
R4381 T5766 T5765 arg1Of and,","
R4382 T5767 T5766 arg2Of maintained,and
R4383 T5767 T5771 arg1Of maintained,on
R4384 T5770 T5767 arg2Of level,maintained
R4385 T5770 T5768 arg1Of level,a
R4386 T5770 T5769 arg1Of level,high
R4387 T5773 T5771 arg2Of days,on
R4388 T5773 T5772 arg1Of days,7
R4389 T5773 T5774 arg1Of days,after
R4390 T5773 T5776 arg1Of days,(
R4391 T5775 T5774 arg2Of ICH,after
R4392 T5777 T5776 arg2Of P,(
R4393 T5777 T5778 arg1Of P,<
R4394 T5777 T5780 arg1Of P,","
R4395 T5778 T5779 arg1Of <,.05
R4396 T5781 T5780 arg2Of Figure,","
R4397 T5781 T5782 arg1Of Figure,5
R4398 T5783 T5776 arg3Of ),(
R4399 T5785 T5784 arg2Of expected,As
R4400 T5788 T5787 arg1Of activity,the
R4401 T5788 T5789 arg1Of activity,of
R4402 T5788 T5791 arg1Of activity,was
R4403 T5788 T5793 arg2Of activity,increased
R4404 T5790 T5789 arg2Of NFκB,of
R4405 T5793 T5784 arg1Of increased,As
R4406 T5793 T5786 arg1Of increased,","
R4407 T5793 T5791 arg2Of increased,was
R4408 T5793 T5792 arg1Of increased,also
R4409 T5793 T5794 arg1Of increased,in
R4410 T5793 T5798 arg1Of increased,as
R4411 T5797 T5794 arg2Of manner,in
R4412 T5797 T5795 arg1Of manner,the
R4413 T5797 T5796 arg1Of manner,same
R4414 T5799 T5798 arg2Of that,as
R4415 T5799 T5800 arg1Of that,of
R4416 T5802 T5800 arg2Of p-IκB,of
R4417 T5802 T5801 arg1Of p-IκB,the
R4418 T5802 T5803 arg1Of p-IκB,(
R4419 T5804 T5803 arg2Of Figure,(
R4420 T5804 T5805 arg1Of Figure,4
R4421 T5806 T5803 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T5620 338-342 Protein denotes TLR4
T5619 68-72 Protein denotes TLR4
T5618 19-23 Protein denotes TLR4

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T5958 338-342 http://www.uniprot.org/uniprot/O00206 denotes TLR4
T5957 68-72 http://www.uniprot.org/uniprot/O00206 denotes TLR4
T5956 19-23 http://www.uniprot.org/uniprot/O00206 denotes TLR4

GO-BP

Id Subject Object Predicate Lexical cue
T5621 85-100 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T5626 357-366 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T5625 285-307 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammatory responses
T5624 251-264 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T5623 159-169 http://purl.obolibrary.org/obo/GO_0008588 denotes NF-kappa-B
T5622 372-387 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

GO-CC

Id Subject Object Predicate Lexical cue
T5627 211-218 http://purl.obolibrary.org/obo/GO_0005634 denotes nucleus

sentences

Id Subject Object Predicate Lexical cue
T5611 309-492 Sentence denotes To detectd the activation of TLR4-mediated NFκB signaling, the phosphorylation of inhibitor of kappa-B (p-IκB) and activity of NFκB were measured by methods of Western Blots and EMSA.
T5610 178-308 Sentence denotes Then, NFκB translocates into the nucleus and activates and regulates the transcription of genes related to inflammatory responses.
T5609 54-177 Sentence denotes Activation of TLR4 induces the phosphorylation of inhibitor of kappa-B (IκB), which dissociates IκB with NF-kappa-B (NFκB).
T5608 5-53 Sentence denotes Activation of TLR4-Mediated NF-Kappa-B Signaling
T5607 0-4 Sentence denotes 3.4.
T5613 662-766 Sentence denotes As expected, the activity of NFκB was also increased in the same manner as that of the p-IκB (Figure 4).
T5612 493-661 Sentence denotes Results showed that the p-IκB increased at 6 hours after ICH (P < .05), peaked on 3 days after ICH, and maintained a high level on 7 days after ICH (P < .05, Figure 5).
T118 0-4 Sentence denotes 3.4.
T119 5-53 Sentence denotes Activation of TLR4-Mediated NF-Kappa-B Signaling
T120 54-177 Sentence denotes Activation of TLR4 induces the phosphorylation of inhibitor of kappa-B (IκB), which dissociates IκB with NF-kappa-B (NFκB).
T121 178-308 Sentence denotes Then, NFκB translocates into the nucleus and activates and regulates the transcription of genes related to inflammatory responses.
T122 309-492 Sentence denotes To detectd the activation of TLR4-mediated NFκB signaling, the phosphorylation of inhibitor of kappa-B (p-IκB) and activity of NFκB were measured by methods of Western Blots and EMSA.
T123 493-661 Sentence denotes Results showed that the p-IκB increased at 6 hours after ICH (P < .05), peaked on 3 days after ICH, and maintained a high level on 7 days after ICH (P < .05, Figure 5).
T124 662-766 Sentence denotes As expected, the activity of NFκB was also increased in the same manner as that of the p-IκB (Figure 4).

simple1

Id Subject Object Predicate Lexical cue
T5664 338-342 Protein denotes TLR4
T5663 68-72 Protein denotes TLR4
T5662 19-23 Protein denotes TLR4

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T6007 54-64 Positive_regulation denotes Activation
T6006 338-342 Protein denotes TLR4
T6005 68-72 Protein denotes TLR4
T6004 19-23 Protein denotes TLR4
R4596 T6005 T6007 themeOf TLR4,Activation

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T5963 54-64 Positive_regulation denotes Activation
T5962 24-32 Positive_regulation denotes Mediated
T5961 338-342 Protein denotes TLR4
T5960 68-72 Protein denotes TLR4
T5959 19-23 Protein denotes TLR4
R4571 T5959 T5962 themeOf TLR4,Mediated
R4572 T5960 T5963 themeOf TLR4,Activation

DLUT931

Id Subject Object Predicate Lexical cue
T5967 54-64 Positive_regulation denotes Activation
T5966 338-342 Protein denotes TLR4
T5965 68-72 Protein denotes TLR4
T5964 19-23 Protein denotes TLR4
R4573 T5965 T5967 themeOf TLR4,Activation

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T6029 335-366 Positive_regulation denotes of TLR4-mediated NFκB signaling
T6028 335-366 Regulation denotes of TLR4-mediated NFκB signaling
T6027 54-72 Positive_regulation denotes Activation of TLR4
T6026 247-307 Transcription denotes the transcription of genes related to inflammatory responses
T6025 184-232 Positive_regulation denotes NFκB translocates into the nucleus and activates
T6024 16-53 Positive_regulation denotes of TLR4-Mediated NF-Kappa-B Signaling
T6023 16-53 Regulation denotes of TLR4-Mediated NF-Kappa-B Signaling
T6022 184-307 Regulation denotes NFκB translocates into the nucleus and activates and regulates the transcription of genes related to inflammatory responses
T6021 338-351 Protein denotes TLR4-mediated
T6020 65-72 Protein denotes of TLR4
T6019 352-356 Protein denotes NFκB
T6018 391-419 Entity denotes inhibitor of kappa-B (p-IκB)
T6017 433-440 Protein denotes of NFκB
T6016 159-176 Protein denotes NF-kappa-B (NFκB)
T6015 207-218 Entity denotes the nucleus
T6014 19-32 Protein denotes TLR4-Mediated
T6013 33-43 Protein denotes NF-Kappa-B
T6012 688-695 Protein denotes of NFκB
T6011 104-131 Entity denotes inhibitor of kappa-B (IκB),
T6010 184-188 Protein denotes NFκB
T6009 171-175 Protein denotes NFκB
T6008 265-307 Protein denotes of genes related to inflammatory responses
R4597 T6008 T6026 themeOf of genes related to inflammatory responses,the transcription of genes related to inflammatory responses
R4598 T6010 T6022 causeOf NFκB,NFκB translocates into the nucleus and activates and regulates the transcription of genes related to inflammatory responses
R4599 T6010 T6025 themeOf NFκB,NFκB translocates into the nucleus and activates
R4600 T6013 T6024 causeOf NF-Kappa-B,of TLR4-Mediated NF-Kappa-B Signaling
R4601 T6014 T6023 causeOf TLR4-Mediated,of TLR4-Mediated NF-Kappa-B Signaling
R4602 T6019 T6029 causeOf NFκB,of TLR4-mediated NFκB signaling
R4603 T6020 T6027 themeOf of TLR4,Activation of TLR4
R4604 T6021 T6028 causeOf TLR4-mediated,of TLR4-mediated NFκB signaling
R4605 T6024 T6023 themeOf of TLR4-Mediated NF-Kappa-B Signaling,of TLR4-Mediated NF-Kappa-B Signaling
R4606 T6026 T6022 themeOf the transcription of genes related to inflammatory responses,NFκB translocates into the nucleus and activates and regulates the transcription of genes related to inflammatory responses
R4607 T6029 T6028 themeOf of TLR4-mediated NFκB signaling,of TLR4-mediated NFκB signaling

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T5955 765-766 . denotes .
T5954 764-765 -RRB- denotes )
T5953 763-764 CD denotes 4
T5952 756-762 NN denotes Figure
T5951 755-756 -LRB- denotes (
T5950 749-754 NN denotes p-IκB
T5949 745-748 DT denotes the
T5948 742-744 IN denotes of
T5947 737-741 DT denotes that
T5946 734-736 IN denotes as
T5945 727-733 NN denotes manner
T5944 722-726 JJ denotes same
T5943 718-721 DT denotes the
T5942 715-717 IN denotes in
T5941 705-714 VBN denotes increased
T5940 700-704 RB denotes also
T5939 696-699 VBD denotes was
T5938 691-695 NNP denotes NFκB
T5937 688-690 IN denotes of
T5936 679-687 NN denotes activity
T5935 675-678 DT denotes the
T5934 673-674 , denotes ,
T5933 665-673 VBN denotes expected
T5932 662-664 IN denotes As
T5931 660-661 . denotes .
T5930 659-660 -RRB- denotes )
T5929 658-659 CD denotes 5
T5928 651-657 NN denotes Figure
T5927 649-650 , denotes ,
T5926 646-649 CD denotes .05
T5925 644-645 CD denotes <
T5924 642-643 NNP denotes P
T5923 641-642 -LRB- denotes (
T5922 637-640 NNP denotes ICH
T5921 631-636 IN denotes after
T5920 626-630 NNS denotes days
T5919 624-625 CD denotes 7
T5918 621-623 IN denotes on
T5917 615-620 NN denotes level
T5916 610-614 JJ denotes high
T5915 608-609 DT denotes a
T5914 597-607 VBD denotes maintained
T5913 593-596 CC denotes and
T5912 591-592 , denotes ,
T5911 588-591 NNP denotes ICH
T5910 582-587 IN denotes after
T5909 577-581 NNS denotes days
T5908 575-576 CD denotes 3
T5907 572-574 IN denotes on
T5906 565-571 VBD denotes peaked
T5905 563-564 , denotes ,
T5904 562-563 -RRB- denotes )
T5903 559-562 CD denotes .05
T5902 557-558 CD denotes <
T5901 555-556 NNP denotes P
T5900 554-555 -LRB- denotes (
T5899 550-553 NNP denotes ICH
T5898 544-549 IN denotes after
T5897 538-543 NNS denotes hours
T5896 536-537 CD denotes 6
T5895 533-535 IN denotes at
T5894 523-532 VBD denotes increased
T5893 517-522 NN denotes p-IκB
T5892 513-516 DT denotes the
T5891 508-512 IN denotes that
T5890 501-507 VBD denotes showed
T5889 493-500 NNS denotes Results
T5888 491-492 . denotes .
T5887 487-491 NNP denotes EMSA
T5886 483-486 CC denotes and
T5885 477-482 NNS denotes Blots
T5884 469-476 JJ denotes Western
T5883 466-468 IN denotes of
T5882 458-465 NNS denotes methods
T5881 455-457 IN denotes by
T5880 446-454 VBN denotes measured
T5879 441-445 VBD denotes were
T5878 436-440 NNP denotes NFκB
T5877 433-435 IN denotes of
T5876 424-432 NN denotes activity
T5875 420-423 CC denotes and
T5874 418-419 -RRB- denotes )
T5873 413-418 NNP denotes p-IκB
T5872 412-413 -LRB- denotes (
T5871 404-411 NNP denotes kappa-B
T5870 401-403 IN denotes of
T5869 391-400 NN denotes inhibitor
T5868 388-390 IN denotes of
T5867 372-387 NN denotes phosphorylation
T5866 368-371 DT denotes the
T5865 366-367 , denotes ,
T5864 357-366 VBG denotes signaling
T5863 352-356 NNP denotes NFκB
T5862 338-351 JJ denotes TLR4-mediated
T5861 335-337 IN denotes of
T5860 324-334 NN denotes activation
T5859 320-323 DT denotes the
T5858 312-319 VB denotes detectd
T5857 309-311 TO denotes To
T5856 307-308 . denotes .
T5855 298-307 NNS denotes responses
T5854 285-297 JJ denotes inflammatory
T5853 282-284 TO denotes to
T5852 274-281 VBN denotes related
T5851 268-273 NNS denotes genes
T5850 265-267 IN denotes of
T5849 251-264 NN denotes transcription
T5848 247-250 DT denotes the
T5847 237-246 VBZ denotes regulates
T5846 233-236 CC denotes and
T5845 223-232 NNS denotes activates
T5844 219-222 CC denotes and
T5843 211-218 NN denotes nucleus
T5842 207-210 DT denotes the
T5841 202-206 IN denotes into
T5840 189-201 VBZ denotes translocates
T5839 184-188 NNP denotes NFκB
T5838 182-183 , denotes ,
T5837 178-182 RB denotes Then
T5836 176-177 . denotes .
T5835 175-176 -RRB- denotes )
T5834 171-175 NNP denotes NFκB
T5833 170-171 -LRB- denotes (
T5832 159-169 NNP denotes NF-kappa-B
T5831 154-158 IN denotes with
T5830 150-153 NNP denotes IκB
T5829 138-149 VBZ denotes dissociates
T5828 132-137 WDT denotes which
T5827 130-131 , denotes ,
T5826 129-130 -RRB- denotes )
T5825 126-129 NNP denotes IκB
T5824 125-126 -LRB- denotes (
T5823 117-124 NNP denotes kappa-B
T5822 114-116 IN denotes of
T5821 104-113 NN denotes inhibitor
T5820 101-103 IN denotes of
T5819 85-100 NN denotes phosphorylation
T5818 81-84 DT denotes the
T5817 73-80 VBZ denotes induces
T5816 68-72 CD denotes TLR4
T5815 65-67 IN denotes of
T5814 54-64 NNP denotes Activation
T5813 44-53 NNP denotes Signaling
T5812 33-43 NNP denotes NF-Kappa-B
T5811 19-32 NNP denotes TLR4-Mediated
T5810 16-18 IN denotes of
T5809 5-15 NNP denotes Activation
T5808 3-4 . denotes .
T5807 0-3 CD denotes 3.4
R4422 T5807 T5807 ROOT 3.4,3.4
R4423 T5808 T5807 punct .,3.4
R4424 T5809 T5817 nsubj Activation,induces
R4425 T5810 T5809 prep of,Activation
R4426 T5811 T5812 compound TLR4-Mediated,NF-Kappa-B
R4427 T5812 T5810 pobj NF-Kappa-B,of
R4428 T5813 T5814 compound Signaling,Activation
R4429 T5814 T5809 conj Activation,Activation
R4430 T5815 T5814 prep of,Activation
R4431 T5816 T5815 pobj TLR4,of
R4432 T5817 T5817 ROOT induces,induces
R4433 T5818 T5819 det the,phosphorylation
R4434 T5819 T5817 dobj phosphorylation,induces
R4435 T5820 T5819 prep of,phosphorylation
R4436 T5821 T5820 pobj inhibitor,of
R4437 T5822 T5821 prep of,inhibitor
R4438 T5823 T5822 pobj kappa-B,of
R4439 T5824 T5823 punct (,kappa-B
R4440 T5825 T5823 appos IκB,kappa-B
R4441 T5826 T5823 punct ),kappa-B
R4442 T5827 T5823 punct ",",kappa-B
R4443 T5828 T5829 nsubj which,dissociates
R4444 T5829 T5823 relcl dissociates,kappa-B
R4445 T5830 T5829 dobj IκB,dissociates
R4446 T5831 T5829 prep with,dissociates
R4447 T5832 T5831 pobj NF-kappa-B,with
R4448 T5833 T5832 punct (,NF-kappa-B
R4449 T5834 T5832 appos NFκB,NF-kappa-B
R4450 T5835 T5832 punct ),NF-kappa-B
R4451 T5836 T5817 punct .,induces
R4452 T5837 T5840 advmod Then,translocates
R4453 T5838 T5840 punct ",",translocates
R4454 T5839 T5840 nsubj NFκB,translocates
R4455 T5840 T5840 ROOT translocates,translocates
R4456 T5841 T5840 prep into,translocates
R4457 T5842 T5843 det the,nucleus
R4458 T5843 T5841 pobj nucleus,into
R4459 T5844 T5840 cc and,translocates
R4460 T5845 T5840 conj activates,translocates
R4461 T5846 T5845 cc and,activates
R4462 T5847 T5845 conj regulates,activates
R4463 T5848 T5849 det the,transcription
R4464 T5849 T5847 dobj transcription,regulates
R4465 T5850 T5849 prep of,transcription
R4466 T5851 T5850 pobj genes,of
R4467 T5852 T5851 acl related,genes
R4468 T5853 T5852 prep to,related
R4469 T5854 T5855 amod inflammatory,responses
R4470 T5855 T5853 pobj responses,to
R4471 T5856 T5840 punct .,translocates
R4472 T5857 T5858 aux To,detectd
R4473 T5858 T5880 advcl detectd,measured
R4474 T5859 T5860 det the,activation
R4475 T5860 T5858 dobj activation,detectd
R4476 T5861 T5860 prep of,activation
R4477 T5862 T5863 compound TLR4-mediated,NFκB
R4478 T5863 T5861 pobj NFκB,of
R4479 T5864 T5860 acl signaling,activation
R4480 T5865 T5880 punct ",",measured
R4481 T5866 T5867 det the,phosphorylation
R4482 T5867 T5880 nsubjpass phosphorylation,measured
R4483 T5868 T5867 prep of,phosphorylation
R4484 T5869 T5868 pobj inhibitor,of
R4485 T5870 T5869 prep of,inhibitor
R4486 T5871 T5870 pobj kappa-B,of
R4487 T5872 T5871 punct (,kappa-B
R4488 T5873 T5871 appos p-IκB,kappa-B
R4489 T5874 T5871 punct ),kappa-B
R4490 T5875 T5869 cc and,inhibitor
R4491 T5876 T5869 conj activity,inhibitor
R4492 T5877 T5869 prep of,inhibitor
R4493 T5878 T5877 pobj NFκB,of
R4494 T5879 T5880 auxpass were,measured
R4495 T5880 T5880 ROOT measured,measured
R4496 T5881 T5880 agent by,measured
R4497 T5882 T5881 pobj methods,by
R4498 T5883 T5882 prep of,methods
R4499 T5884 T5885 amod Western,Blots
R4500 T5885 T5883 pobj Blots,of
R4501 T5886 T5885 cc and,Blots
R4502 T5887 T5885 conj EMSA,Blots
R4503 T5888 T5880 punct .,measured
R4504 T5889 T5890 nsubj Results,showed
R4505 T5890 T5890 ROOT showed,showed
R4506 T5891 T5894 mark that,increased
R4507 T5892 T5893 det the,p-IκB
R4508 T5893 T5894 nsubj p-IκB,increased
R4509 T5894 T5890 ccomp increased,showed
R4510 T5895 T5894 prep at,increased
R4511 T5896 T5897 nummod 6,hours
R4512 T5897 T5895 pobj hours,at
R4513 T5898 T5906 mark after,peaked
R4514 T5899 T5906 nsubj ICH,peaked
R4515 T5900 T5899 punct (,ICH
R4516 T5901 T5904 nmod P,)
R4517 T5902 T5903 nummod <,.05
R4518 T5903 T5901 appos .05,P
R4519 T5904 T5899 punct ),ICH
R4520 T5905 T5906 punct ",",peaked
R4521 T5906 T5894 advcl peaked,increased
R4522 T5907 T5906 prep on,peaked
R4523 T5908 T5909 nummod 3,days
R4524 T5909 T5907 pobj days,on
R4525 T5910 T5906 prep after,peaked
R4526 T5911 T5910 pobj ICH,after
R4527 T5912 T5906 punct ",",peaked
R4528 T5913 T5906 cc and,peaked
R4529 T5914 T5906 conj maintained,peaked
R4530 T5915 T5917 det a,level
R4531 T5916 T5917 amod high,level
R4532 T5917 T5914 dobj level,maintained
R4533 T5918 T5914 prep on,maintained
R4534 T5919 T5920 nummod 7,days
R4535 T5920 T5918 pobj days,on
R4536 T5921 T5914 prep after,maintained
R4537 T5922 T5924 nmod ICH,P
R4538 T5923 T5922 punct (,ICH
R4539 T5924 T5921 pobj P,after
R4540 T5925 T5926 nummod <,.05
R4541 T5926 T5924 prep .05,P
R4542 T5927 T5928 punct ",",Figure
R4543 T5928 T5924 appos Figure,P
R4544 T5929 T5928 nummod 5,Figure
R4545 T5930 T5928 punct ),Figure
R4546 T5931 T5890 punct .,showed
R4547 T5932 T5933 mark As,expected
R4548 T5933 T5941 advcl expected,increased
R4549 T5934 T5941 punct ",",increased
R4550 T5935 T5936 det the,activity
R4551 T5936 T5941 nsubjpass activity,increased
R4552 T5937 T5936 prep of,activity
R4553 T5938 T5937 pobj NFκB,of
R4554 T5939 T5941 auxpass was,increased
R4555 T5940 T5941 advmod also,increased
R4556 T5941 T5941 ROOT increased,increased
R4557 T5942 T5941 prep in,increased
R4558 T5943 T5945 det the,manner
R4559 T5944 T5945 amod same,manner
R4560 T5945 T5942 pobj manner,in
R4561 T5946 T5945 prep as,manner
R4562 T5947 T5946 pobj that,as
R4563 T5948 T5947 prep of,that
R4564 T5949 T5950 det the,p-IκB
R4565 T5950 T5948 pobj p-IκB,of
R4566 T5951 T5952 punct (,Figure
R4567 T5952 T5947 appos Figure,that
R4568 T5953 T5952 nummod 4,Figure
R4569 T5954 T5952 punct ),Figure
R4570 T5955 T5941 punct .,increased

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T5661 705-714 Positive_regulation denotes increased
T5660 749-754 Protein denotes p-IκB
T5659 691-695 Protein denotes NFκB
T5633 5-15 Positive_regulation denotes Activation
T5632 24-43 Protein denotes Mediated NF-Kappa-B
T5631 19-23 Protein denotes TLR4
T5638 159-169 Protein denotes NF-kappa-B
T5637 150-153 Protein denotes IκB
T5636 126-129 Protein denotes IκB
T5635 117-124 Protein denotes kappa-B
T5634 68-72 Protein denotes TLR4
T5658 523-532 Positive_regulation denotes increased
T5657 517-522 Protein denotes p-IκB
T5656 391-400 Negative_regulation denotes inhibitor
T5655 436-440 Protein denotes NFκB
T5654 352-356 Protein denotes NFκB
T5653 338-342 Protein denotes TLR4
T5652 184-201 Protein denotes NFκB translocates
T5651 73-80 Positive_regulation denotes induces
T5650 73-80 Positive_regulation denotes induces
T5649 138-149 Positive_regulation denotes dissociates
T5648 138-149 Positive_regulation denotes dissociates
T5647 138-149 Positive_regulation denotes dissociates
T5646 104-113 Negative_regulation denotes inhibitor
T5645 104-113 Negative_regulation denotes inhibitor
T5644 104-113 Negative_regulation denotes inhibitor
T5643 104-113 Negative_regulation denotes inhibitor
T5642 85-100 Phosphorylation denotes phosphorylation
T5641 85-100 Phosphorylation denotes phosphorylation
T5640 54-64 Positive_regulation denotes Activation
T5639 171-175 Protein denotes NFκB
R4260 T5632 T5633 themeOf Mediated NF-Kappa-B,Activation
R4261 T5634 T5640 themeOf TLR4,Activation
R4262 T5635 T5641 themeOf kappa-B,phosphorylation
R4263 T5635 T5643 themeOf kappa-B,inhibitor
R4264 T5636 T5642 themeOf IκB,phosphorylation
R4265 T5636 T5644 themeOf IκB,inhibitor
R4266 T5637 T5647 themeOf IκB,dissociates
R4267 T5638 T5647 causeOf NF-kappa-B,dissociates
R4268 T5638 T5648 causeOf NF-kappa-B,dissociates
R4269 T5638 T5649 causeOf NF-kappa-B,dissociates
R4270 T5640 T5650 causeOf Activation,induces
R4271 T5640 T5651 causeOf Activation,induces
R4272 T5641 T5645 themeOf phosphorylation,inhibitor
R4273 T5641 T5648 themeOf phosphorylation,dissociates
R4274 T5641 T5650 themeOf phosphorylation,induces
R4275 T5642 T5646 themeOf phosphorylation,inhibitor
R4276 T5642 T5649 themeOf phosphorylation,dissociates
R4277 T5642 T5651 themeOf phosphorylation,induces
R4278 T5655 T5656 themeOf NFκB,inhibitor
R4279 T5657 T5658 themeOf p-IκB,increased
R4280 T5659 T5661 themeOf NFκB,increased

testone

Id Subject Object Predicate Lexical cue
T5598 705-714 Positive_regulation denotes increased
T5597 523-532 Positive_regulation denotes increased
T5596 211-218 Entity denotes nucleus
T5595 54-64 Positive_regulation denotes Activation
T5594 338-342 Protein denotes TLR4
T5593 68-72 Protein denotes TLR4
T5592 19-23 Protein denotes TLR4
R4258 T5593 T5595 themeOf TLR4,Activation

test3

Id Subject Object Predicate Lexical cue
T5606 523-532 Positive_regulation denotes increased
T5605 338-342 Protein denotes TLR4
T5604 73-80 Positive_regulation denotes induces
T5603 68-72 Protein denotes TLR4
T5602 19-23 Protein denotes TLR4
T5601 338-342 Protein denotes TLR4
T5600 68-72 Protein denotes TLR4
T5599 19-23 Protein denotes TLR4