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PMC:2806624 / 9437-9596 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T4158 0-3 DT denotes The
T4159 4-10 NN denotes effect
T4160 11-13 IN denotes of
T4161 14-18 NN denotes RUNX
T4162 19-28 NN denotes silencing
T4163 29-31 IN denotes on
T4164 32-35 DT denotes the
T4165 36-46 NN denotes expression
T4166 47-52 NN denotes level
T4167 53-55 IN denotes of
T4168 56-69 JJ denotes intracellular
T4169 70-75 NN denotes FOXP3
T4170 76-82 IN denotes during
T4171 83-88 JJ denotes naive
T4172 89-93 JJ denotes CD4+
T4173 94-95 NN denotes T
T4174 96-100 NN denotes cell
T4175 101-116 NN denotes differentiation
T4176 117-119 TO denotes to
T4177 120-122 NN denotes iT
T4178 123-126 NN denotes reg
T4179 127-130 VB denotes was
T4180 131-140 VB denotes evaluated
T4181 141-143 IN denotes by
T4182 144-148 NN denotes flow
T4183 149-158 NN denotes cytometry
R3265 T4159 T4158 arg1Of effect,The
R3266 T4159 T4160 arg1Of effect,of
R3267 T4159 T4163 arg1Of effect,on
R3268 T4159 T4179 arg1Of effect,was
R3269 T4159 T4180 arg2Of effect,evaluated
R3270 T4162 T4160 arg2Of silencing,of
R3271 T4162 T4161 arg1Of silencing,RUNX
R3272 T4166 T4163 arg2Of level,on
R3273 T4166 T4164 arg1Of level,the
R3274 T4166 T4165 arg1Of level,expression
R3275 T4166 T4167 arg1Of level,of
R3276 T4166 T4170 arg1Of level,during
R3277 T4169 T4167 arg2Of FOXP3,of
R3278 T4169 T4168 arg1Of FOXP3,intracellular
R3279 T4175 T4170 arg2Of differentiation,during
R3280 T4175 T4171 arg1Of differentiation,naive
R3281 T4175 T4172 arg1Of differentiation,CD4+
R3282 T4175 T4173 arg1Of differentiation,T
R3283 T4175 T4174 arg1Of differentiation,cell
R3284 T4175 T4176 arg1Of differentiation,to
R3285 T4178 T4176 arg2Of reg,to
R3286 T4178 T4177 arg1Of reg,iT
R3287 T4180 T4179 arg2Of evaluated,was
R3288 T4183 T4180 arg1Of cytometry,evaluated
R3289 T4183 T4181 arg2Of cytometry,by
R3290 T4183 T4182 arg1Of cytometry,flow

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T4943 0-3 DT denotes The
T4944 4-10 NN denotes effect
T4945 11-13 IN denotes of
T4946 14-18 NNP denotes RUNX
T4947 19-28 VBG denotes silencing
T4948 29-31 IN denotes on
T4949 32-35 DT denotes the
T4950 36-46 NN denotes expression
T4951 47-52 NN denotes level
T4952 53-55 IN denotes of
T4953 56-69 JJ denotes intracellular
T4954 70-75 CD denotes FOXP3
T4955 76-82 IN denotes during
T4956 83-88 JJ denotes naive
T4957 89-92 NNP denotes CD4
T4958 92-93 CD denotes +
T4959 94-95 NNP denotes T
T4960 96-100 NN denotes cell
T4961 101-116 NN denotes differentiation
T4962 117-119 TO denotes to
T4963 120-122 VB denotes iT
T4964 123-126 NN denotes reg
T4965 127-130 VBD denotes was
T4966 131-140 VBN denotes evaluated
T4967 141-143 IN denotes by
T4968 144-148 NN denotes flow
T4969 149-158 NN denotes cytometry
T4970 158-159 . denotes .
R3971 T4943 T4944 det The,effect
R3974 T4944 T4966 nsubjpass effect,evaluated
R3978 T4945 T4944 prep of,effect
R3981 T4946 T4945 pobj RUNX,of
R3983 T4947 T4944 acl silencing,effect
R3986 T4948 T4947 prep on,silencing
R3990 T4949 T4951 det the,level
R3994 T4950 T4951 compound expression,level
R3998 T4951 T4948 pobj level,on
R4002 T4952 T4951 prep of,level
R4006 T4953 T4952 pobj intracellular,of
R4008 T4954 T4953 nummod FOXP3,intracellular
R4011 T4955 T4947 prep during,silencing
R4017 T4956 T4961 amod naive,differentiation
R4020 T4957 T4961 compound CD4,differentiation
R4025 T4958 T4961 nummod +,differentiation
R4029 T4959 T4960 compound T,cell
R4033 T4960 T4961 compound cell,differentiation
R4037 T4961 T4955 pobj differentiation,during
R4041 T4962 T4963 aux to,iT
R4045 T4963 T4961 relcl iT,differentiation
R4049 T4964 T4966 nsubjpass reg,evaluated
R4053 T4965 T4966 auxpass was,evaluated
R4059 T4966 T4966 ROOT evaluated,evaluated
R4060 T4967 T4966 agent by,evaluated
R4063 T4968 T4969 compound flow,cytometry
R4070 T4969 T4967 pobj cytometry,by
R4074 T4970 T4966 punct .,evaluated

GO-BP

Id Subject Object Predicate Lexical cue
T5282 96-116 http://purl.obolibrary.org/obo/GO_0030154 denotes cell differentiation

GO-CC

Id Subject Object Predicate Lexical cue
T5475 96-100 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T5480 56-69 http://purl.obolibrary.org/obo/GO_0005622 denotes intracellular

sentences

Id Subject Object Predicate Lexical cue
T3615 0-159 Sentence denotes The effect of RUNX silencing on the expression level of intracellular FOXP3 during naive CD4+ T cell differentiation to iT reg was evaluated by flow cytometry.
T61 0-159 Sentence denotes The effect of RUNX silencing on the expression level of intracellular FOXP3 during naive CD4+ T cell differentiation to iT reg was evaluated by flow cytometry.

events-check-again

Id Subject Object Predicate Lexical cue Speculation
T5568 4-10 Regulation denotes effect true
T5569 14-18 Protein denotes RUNX
T5570 19-28 Negative_regulation denotes silencing
T5571 36-46 Gene_expression denotes expression
T5572 70-75 Protein denotes FOXP3
T5573 89-92 Protein denotes CD4
R4460 T5569 T5570 themeOf RUNX,silencing
R4462 T5570 T5568 causeOf silencing,effect
R4463 T5571 T5568 themeOf expression,effect
R4465 T5572 T5571 themeOf FOXP3,expression

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Speculation
T3666 4-10 Regulation denotes effect true
T3667 36-46 Gene_expression denotes expression
T3668 19-28 Negative_regulation denotes silencing
T3758 14-18 Protein denotes RUNX
T3759 70-75 Protein denotes FOXP3
T3760 89-92 Protein denotes CD4
R2808 T3667 T3666 themeOf expression,effect
R2809 T3668 T3666 causeOf silencing,effect
R2871 T3758 T3668 themeOf RUNX,silencing
R2872 T3759 T3667 themeOf FOXP3,expression

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T4502 14-18 Q13761 denotes RUNX
T4503 14-18 Q01196 denotes RUNX
T4504 14-18 Q13950 denotes RUNX
T4505 70-75 Q9BZS1 denotes FOXP3
T4506 89-92 P01730 denotes CD4

test2

Id Subject Object Predicate Lexical cue Negation
T3536 14-18 Protein denotes RUNX true
T3537 19-28 Negative_regulation denotes silencing true
T3538 36-46 Gene_expression denotes expression true
T3539 70-75 Protein denotes FOXP3 true
T3540 89-92 Protein denotes CD4 true
R2756 T3536 T3537 themeOf RUNX,silencing
R2757 T3539 T3538 themeOf FOXP3,expression