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PMC:2806624 / 8393-8573 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T3979 0-10 NN denotes Deficiency
T3980 11-13 IN denotes of
T3981 14-19 NN denotes RUNX1
T3982 20-22 CC denotes or
T3983 23-28 NN denotes RUNX3
T3984 29-37 VB denotes resulted
T3985 38-40 IN denotes in
T3986 41-49 RB denotes markedly
T3987 50-57 VB denotes reduced
T3988 58-72 JJ denotes TGF-β–mediated
T3989 73-82 NN denotes induction
T3990 83-85 IN denotes of
T3991 86-91 NN denotes FOXP3
T3992 92-96 NN denotes mRNA
T3993 97-99 IN denotes in
T3994 100-105 JJ denotes naive
T3995 106-110 JJ denotes CD4+
T3996 111-112 NN denotes T
T3997 113-118 NN denotes cells
T3998 119-127 VB denotes compared
T3999 128-132 IN denotes with
T4000 133-140 NN denotes control
T4001 141-146 NN denotes cells
T4002 147-158 VB denotes transfected
T4003 159-163 IN denotes with
T4004 164-173 VB denotes scrambled
T4005 174-179 NN denotes siRNA
R3082 T3979 T3980 arg1Of Deficiency,of
R3083 T3979 T3984 arg1Of Deficiency,resulted
R3084 T3981 T3982 arg1Of RUNX1,or
R3085 T3982 T3980 arg2Of or,of
R3086 T3983 T3982 arg2Of RUNX3,or
R3087 T3984 T3985 arg1Of resulted,in
R3088 T3987 T3986 arg1Of reduced,markedly
R3089 T3989 T3985 arg2Of induction,in
R3090 T3989 T3987 arg1Of induction,reduced
R3091 T3989 T3988 arg1Of induction,TGF-β–mediated
R3092 T3989 T3990 arg1Of induction,of
R3093 T3989 T3993 arg1Of induction,in
R3094 T3992 T3990 arg2Of mRNA,of
R3095 T3992 T3991 arg1Of mRNA,FOXP3
R3096 T3997 T3993 arg2Of cells,in
R3097 T3997 T3994 arg1Of cells,naive
R3098 T3997 T3995 arg1Of cells,CD4+
R3099 T3997 T3996 arg1Of cells,T
R3100 T3997 T3998 arg1Of cells,compared
R3101 T3999 T3998 arg2Of with,compared
R3102 T4001 T3999 arg2Of cells,with
R3103 T4001 T4000 arg1Of cells,control
R3104 T4001 T4002 arg2Of cells,transfected
R3105 T4002 T4003 arg1Of transfected,with
R3106 T4005 T4003 arg2Of siRNA,with
R3107 T4005 T4004 arg2Of siRNA,scrambled

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T4753 0-10 NN denotes Deficiency
T4754 11-13 IN denotes of
T4755 14-19 CD denotes RUNX1
T4756 20-22 CC denotes or
T4757 23-28 CD denotes RUNX3
T4758 29-37 VBD denotes resulted
T4759 38-40 IN denotes in
T4760 41-49 RB denotes markedly
T4761 50-57 VBN denotes reduced
T4762 58-63 NNP denotes TGF-β
T4763 64-72 VBD denotes mediated
T4764 73-82 NN denotes induction
T4765 83-85 IN denotes of
T4766 86-91 CD denotes FOXP3
T4767 92-96 NNP denotes mRNA
T4768 97-99 IN denotes in
T4769 100-105 JJ denotes naive
T4770 106-109 NNP denotes CD4
T4771 109-110 CD denotes +
T4772 111-112 NNP denotes T
T4773 113-118 NNS denotes cells
T4774 119-127 VBN denotes compared
T4775 128-132 IN denotes with
T4776 133-140 NN denotes control
T4777 141-146 NNS denotes cells
T4778 147-158 VBN denotes transfected
T4779 159-163 IN denotes with
T4780 164-173 VBD denotes scrambled
T4781 174-179 NNP denotes siRNA
T4782 179-180 . denotes .
R3702 T4753 T4758 nsubj Deficiency,resulted
R3704 T4754 T4753 prep of,Deficiency
R3705 T4755 T4754 pobj RUNX1,of
R3706 T4756 T4755 cc or,RUNX1
R3708 T4757 T4755 conj RUNX3,RUNX1
R3709 T4758 T4758 ROOT resulted,resulted
R3710 T4759 T4758 prep in,resulted
R3711 T4760 T4761 advmod markedly,reduced
R3712 T4761 T4762 amod reduced,TGF-β
R3713 T4762 T4759 pobj TGF-β,in
R3715 T4763 T4758 conj mediated,resulted
R3716 T4764 T4763 dobj induction,mediated
R3717 T4765 T4764 prep of,induction
R3718 T4766 T4767 nummod FOXP3,mRNA
R3720 T4767 T4765 pobj mRNA,of
R3721 T4768 T4764 prep in,induction
R3723 T4769 T4773 amod naive,cells
R3725 T4770 T4772 compound CD4,T
R3727 T4771 T4772 compound +,T
R3728 T4772 T4773 compound T,cells
R3729 T4773 T4768 pobj cells,in
R3731 T4774 T4763 prep compared,mediated
R3732 T4775 T4774 prep with,compared
R3733 T4776 T4777 compound control,cells
R3735 T4777 T4775 pobj cells,with
R3736 T4778 T4777 acl transfected,cells
R3737 T4779 T4778 prep with,transfected
R3739 T4780 T4758 conj scrambled,resulted
R3740 T4781 T4780 dobj siRNA,scrambled
R3741 T4782 T4758 punct .,resulted

sentences

Id Subject Object Predicate Lexical cue
T3609 0-180 Sentence denotes Deficiency of RUNX1 or RUNX3 resulted in markedly reduced TGF-β–mediated induction of FOXP3 mRNA in naive CD4+ T cells compared with control cells transfected with scrambled siRNA.
T55 0-180 Sentence denotes Deficiency of RUNX1 or RUNX3 resulted in markedly reduced TGF-β–mediated induction of FOXP3 mRNA in naive CD4+ T cells compared with control cells transfected with scrambled siRNA.

events-check-again

Id Subject Object Predicate Lexical cue
T5521 0-10 Negative_regulation denotes Deficiency
T5522 0-10 Negative_regulation denotes Deficiency
T5523 14-19 Protein denotes RUNX1
T5524 23-28 Protein denotes RUNX3
T5525 50-57 Negative_regulation denotes reduced
T5526 50-57 Negative_regulation denotes reduced
T5527 58-63 Protein denotes TGF-β
T5528 64-72 Positive_regulation denotes mediated
T5529 73-82 Transcription denotes induction
T5530 86-91 Protein denotes FOXP3
T5531 106-109 Protein denotes CD4
R4412 T5521 T5525 causeOf Deficiency,reduced
R4413 T5522 T5526 causeOf Deficiency,reduced
R4414 T5523 T5521 themeOf RUNX1,Deficiency
R4415 T5524 T5522 themeOf RUNX3,Deficiency
R4416 T5527 T5528 causeOf TGF-β,mediated
R4418 T5529 T5525 themeOf induction,reduced
R4419 T5529 T5526 themeOf induction,reduced
R4420 T5529 T5528 themeOf induction,mediated
R4421 T5530 T5529 themeOf FOXP3,induction

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T3636 0-10 Negative_regulation denotes Deficiency
T3637 0-10 Negative_regulation denotes Deficiency
T3638 50-57 Negative_regulation denotes reduced
T3640 73-82 Transcription denotes induction
T3641 50-57 Negative_regulation denotes reduced
T3642 64-72 Positive_regulation denotes mediated
T3738 14-19 Protein denotes RUNX1
T3739 23-28 Protein denotes RUNX3
T3740 86-91 Protein denotes FOXP3
T3741 106-109 Protein denotes CD4
T3810 58-63 Protein denotes TGF-β
R2786 T3640 T3642 themeOf induction,mediated
R2857 T3738 T3636 themeOf RUNX1,Deficiency
R2858 T3739 T3637 themeOf RUNX3,Deficiency
R2859 T3740 T3640 themeOf FOXP3,induction
R2910 T3810 T3642 causeOf TGF-β,mediated
R2781 T3636 T3638 causeOf Deficiency,reduced
R2782 T3637 T3641 causeOf Deficiency,reduced
R2784 T3640 T3638 themeOf induction,reduced
R2785 T3640 T3641 themeOf induction,reduced

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T4482 14-19 Q01196 denotes RUNX1
T4483 23-28 Q13761 denotes RUNX3
T4484 58-63 P01137 denotes TGF-β
T4485 86-91 Q9BZS1 denotes FOXP3
T4486 106-109 P01730 denotes CD4

test2

Id Subject Object Predicate Lexical cue Negation
T3502 0-10 Negative_regulation denotes Deficiency true
T3503 14-19 Protein denotes RUNX1
T3504 23-28 Protein denotes RUNX3 true
T3505 29-37 Positive_regulation denotes resulted true
T3506 50-57 Negative_regulation denotes reduced
T3507 58-63 Protein denotes TGF-β true
T3508 64-72 Positive_regulation denotes mediated
T3509 73-82 Positive_regulation denotes induction
T3510 86-91 Protein denotes FOXP3
T3511 106-109 Protein denotes CD4
R2731 T3502 T3506 causeOf Deficiency,reduced
R2732 T3502 T3505 causeOf Deficiency,resulted
R2733 T3503 T3502 themeOf RUNX1,Deficiency
R2734 T3504 T3502 themeOf RUNX3,Deficiency
R2735 T3507 T3509 causeOf TGF-β,induction
R2736 T3508 T3506 themeOf mediated,reduced
R2737 T3509 T3508 themeOf induction,mediated
R2738 T3509 T3506 themeOf induction,reduced
R2739 T3510 T3509 themeOf FOXP3,induction