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PMC:2806624 / 7856-8020 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T28826 0-5 JJ denotes Human
T28827 6-11 JJ denotes naive
T28828 12-16 JJ denotes CD4+
T28829 17-18 NN denotes T
T28830 19-24 NN denotes cells
T28831 25-29 VB denotes were
T28832 30-41 VB denotes transfected
T28833 42-46 IN denotes with
T28834 47-52 NN denotes RUNX1
T28835 53-59 CC denotes and/or
T28836 60-65 NN denotes RUNX3
T28837 66-71 NN denotes siRNA
T28838 72-74 CC denotes or
T28839 75-79 IN denotes with
T28840 80-81 DT denotes a
T28841 82-89 NN denotes control
T28842 90-95 NN denotes siRNA
T28843 96-99 CC denotes and
T28844 100-110 VB denotes stimulated
T28845 111-115 IN denotes with
T28846 116-129 JJ denotes anti-CD2/3/28
T28847 130-133 CC denotes and
T28848 134-139 NN denotes TGF-β
T28849 140-142 IN denotes in
T28850 143-146 DT denotes the
T28851 147-155 NN denotes presence
T28852 156-158 IN denotes of
T28853 159-163 NN denotes IL-2
R22322 T28830 T28826 arg1Of cells,Human
R22323 T28830 T28827 arg1Of cells,naive
R22324 T28830 T28828 arg1Of cells,CD4+
R22325 T28830 T28829 arg1Of cells,T
R22326 T28830 T28831 arg1Of cells,were
R22327 T28830 T28832 arg2Of cells,transfected
R22328 T28830 T28844 arg2Of cells,stimulated
R22329 T28832 T28833 arg1Of transfected,with
R22330 T28832 T28839 arg1Of transfected,with
R22331 T28832 T28843 arg1Of transfected,and
R22332 T28833 T28838 arg1Of with,or
R22333 T28834 T28835 arg1Of RUNX1,and/or
R22334 T28835 T28833 arg2Of and/or,with
R22335 T28837 T28835 arg2Of siRNA,and/or
R22336 T28837 T28836 arg1Of siRNA,RUNX3
R22337 T28839 T28838 arg2Of with,or
R22338 T28842 T28839 arg2Of siRNA,with
R22339 T28842 T28840 arg1Of siRNA,a
R22340 T28842 T28841 arg1Of siRNA,control
R22341 T28843 T28831 arg2Of and,were
R22342 T28844 T28843 arg2Of stimulated,and
R22343 T28844 T28845 arg1Of stimulated,with
R22344 T28846 T28847 arg1Of anti-CD2/3/28,and
R22345 T28847 T28845 arg2Of and,with
R22346 T28847 T28849 arg1Of and,in
R22347 T28848 T28847 arg2Of TGF-β,and
R22348 T28851 T28849 arg2Of presence,in
R22349 T28851 T28850 arg1Of presence,the
R22350 T28851 T28852 arg1Of presence,of
R22351 T28853 T28852 arg2Of IL-2,of

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T29190 0-5 JJ denotes Human
T29191 6-11 JJ denotes naive
T29192 12-15 NNP denotes CD4
T29193 15-16 CD denotes +
T29194 17-18 NNP denotes T
T29195 19-24 NNS denotes cells
T29196 25-29 VBD denotes were
T29197 30-41 VBN denotes transfected
T29198 42-46 IN denotes with
T29199 47-52 NNP denotes RUNX1
T29200 53-59 CC denotes and/or
T29201 60-65 NNP denotes RUNX3
T29202 66-71 NNP denotes siRNA
T29203 72-74 CC denotes or
T29204 75-79 IN denotes with
T29205 80-81 DT denotes a
T29206 82-89 NN denotes control
T29207 90-95 NNP denotes siRNA
T29208 96-99 CC denotes and
T29209 100-110 VBN denotes stimulated
T29210 111-115 IN denotes with
T29211 116-124 JJ denotes anti-CD2
T29212 124-125 NN denotes /
T29213 125-129 CD denotes 3/28
T29214 130-133 CC denotes and
T29215 134-139 NNP denotes TGF-β
T29216 140-142 IN denotes in
T29217 143-146 DT denotes the
T29218 147-155 NN denotes presence
T29219 156-158 IN denotes of
T29220 159-163 NN denotes IL-2
T29221 163-164 . denotes .
R22634 T29190 T29191 npadvmod Human,naive
R22635 T29191 T29195 amod naive,cells
R22636 T29192 T29195 compound CD4,cells
R22637 T29193 T29195 nummod +,cells
R22638 T29194 T29195 compound T,cells
R22639 T29195 T29197 nsubjpass cells,transfected
R22640 T29196 T29197 auxpass were,transfected
R22641 T29197 T29197 ROOT transfected,transfected
R22642 T29198 T29197 prep with,transfected
R22643 T29199 T29198 pobj RUNX1,with
R22644 T29200 T29199 cc and/or,RUNX1
R22645 T29201 T29202 compound RUNX3,siRNA
R22646 T29202 T29199 conj siRNA,RUNX1
R22647 T29203 T29198 cc or,with
R22648 T29204 T29198 conj with,with
R22649 T29205 T29206 det a,control
R22650 T29206 T29204 pobj control,with
R22651 T29207 T29206 appos siRNA,control
R22652 T29208 T29197 cc and,transfected
R22653 T29209 T29197 conj stimulated,transfected
R22654 T29210 T29209 prep with,stimulated
R22655 T29211 T29212 compound anti-CD2,/
R22656 T29212 T29210 pobj /,with
R22657 T29213 T29212 nummod 3/28,/
R22658 T29214 T29212 cc and,/
R22659 T29215 T29212 conj TGF-β,/
R22660 T29216 T29209 prep in,stimulated
R22661 T29217 T29218 det the,presence
R22662 T29218 T29216 pobj presence,in
R22663 T29219 T29218 prep of,presence
R22664 T29220 T29219 pobj IL-2,of
R22665 T29221 T29197 punct .,transfected

GO-MF

Id Subject Object Predicate Lexical cue
T29359 159-163 http://purl.obolibrary.org/obo/GO_0005134 denotes IL-2

GO-CC

Id Subject Object Predicate Lexical cue
T29368 19-24 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T28600 0-164 Sentence denotes Human naive CD4+ T cells were transfected with RUNX1 and/or RUNX3 siRNA or with a control siRNA and stimulated with anti-CD2/3/28 and TGF-β in the presence of IL-2.
T50 0-164 Sentence denotes Human naive CD4+ T cells were transfected with RUNX1 and/or RUNX3 siRNA or with a control siRNA and stimulated with anti-CD2/3/28 and TGF-β in the presence of IL-2.

events-check-again

Id Subject Object Predicate Lexical cue
T29449 12-15 Protein denotes CD4
T29450 47-52 Protein denotes RUNX1
T29451 60-65 Protein denotes RUNX3
T29452 66-71 Negative_regulation denotes siRNA
T29453 66-71 Negative_regulation denotes siRNA
T29454 121-124 Protein denotes CD2
T29455 125-126 Protein denotes 3
T29456 127-129 Protein denotes 28
T29457 134-139 Protein denotes TGF-β
T29458 159-163 Protein denotes IL-2
R22806 T29450 T29452 themeOf RUNX1,siRNA
R22807 T29451 T29453 themeOf RUNX3,siRNA

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T29593 12-16 Protein denotes CD4+
T29594 47-52 Protein denotes RUNX1
T29595 60-71 Protein denotes RUNX3 siRNA
T29596 134-139 Protein denotes TGF-β
T29597 159-163 Protein denotes IL-2

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T28581 12-15 Protein denotes CD4
T28582 47-52 Protein denotes RUNX1
T28583 60-65 Protein denotes RUNX3
T28584 66-71 Negative_regulation denotes siRNA
T28585 66-71 Negative_regulation denotes siRNA
T28586 121-124 Protein denotes CD2
T28587 125-126 Protein denotes 3
T28588 127-129 Protein denotes 28
T28589 134-139 Protein denotes TGF-β
T28590 159-163 Protein denotes IL-2
R22097 T28582 T28584 themeOf RUNX1,siRNA
R22098 T28583 T28585 themeOf RUNX3,siRNA

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T28928 12-15 P01730 denotes CD4
T28929 47-52 Q01196 denotes RUNX1
T28930 60-65 Q13761 denotes RUNX3
T28931 121-124 P06729 denotes CD2
T28932 134-139 P01137 denotes TGF-β
T28933 159-163 P60568 denotes IL-2

test2

Id Subject Object Predicate Lexical cue
T28491 12-15 Protein denotes CD4
T28492 47-52 Protein denotes RUNX1
T28493 60-65 Protein denotes RUNX3
T28494 66-71 Negative_regulation denotes siRNA
T28495 121-124 Protein denotes CD2
T28496 125-126 Protein denotes 3
T28497 127-129 Protein denotes 28
T28498 134-139 Protein denotes TGF-β
T28499 159-163 Protein denotes IL-2
R22048 T28492 T28494 themeOf RUNX1,siRNA
R22049 T28493 T28494 themeOf RUNX3,siRNA