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PMC:2806624 / 7151-7317 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T28695 0-9 JJ denotes Real-time
T28696 10-13 NN denotes PCR
T28697 14-16 IN denotes of
T28698 17-20 NN denotes RNA
T28699 21-25 IN denotes from
T28700 26-31 JJ denotes human
T28701 32-37 JJ denotes naive
T28702 38-42 JJ denotes CD4+
T28703 43-44 NN denotes T
T28704 45-50 NN denotes cells
T28705 50-51 -COMMA- denotes ,
T28706 52-63 VB denotes transfected
T28707 64-68 IN denotes with
T28708 69-74 NN denotes RUNX1
T28709 75-81 CC denotes and/or
T28710 82-87 NN denotes RUNX3
T28711 88-93 NN denotes siRNA
T28712 94-96 CC denotes or
T28713 97-101 IN denotes with
T28714 102-103 DT denotes a
T28715 104-111 NN denotes control
T28716 112-117 NN denotes siRNA
T28717 118-121 CC denotes and
T28718 122-130 VB denotes cultured
T28719 131-135 IN denotes with
T28720 136-149 NN denotes anti-CD2/3/28
T28721 149-150 -COMMA- denotes ,
T28722 151-156 NN denotes TGF-β
T28723 157-160 CC denotes and
T28724 161-165 NN denotes IL-2
R22189 T28696 T28695 arg1Of PCR,Real-time
R22190 T28696 T28697 arg1Of PCR,of
R22191 T28696 T28699 arg1Of PCR,from
R22192 T28698 T28697 arg2Of RNA,of
R22193 T28704 T28699 arg2Of cells,from
R22194 T28704 T28700 arg1Of cells,human
R22195 T28704 T28701 arg1Of cells,naive
R22196 T28704 T28702 arg1Of cells,CD4+
R22197 T28704 T28703 arg1Of cells,T
R22198 T28704 T28705 arg1Of cells,","
R22199 T28704 T28706 arg2Of cells,transfected
R22200 T28704 T28718 arg2Of cells,cultured
R22201 T28706 T28707 arg1Of transfected,with
R22202 T28706 T28713 arg1Of transfected,with
R22203 T28706 T28717 arg1Of transfected,and
R22204 T28707 T28712 arg1Of with,or
R22205 T28708 T28709 arg1Of RUNX1,and/or
R22206 T28709 T28707 arg2Of and/or,with
R22207 T28711 T28709 arg2Of siRNA,and/or
R22208 T28711 T28710 arg1Of siRNA,RUNX3
R22209 T28713 T28712 arg2Of with,or
R22210 T28716 T28713 arg2Of siRNA,with
R22211 T28716 T28714 arg1Of siRNA,a
R22212 T28716 T28715 arg1Of siRNA,control
R22213 T28718 T28717 arg2Of cultured,and
R22214 T28718 T28719 arg1Of cultured,with
R22215 T28720 T28721 arg1Of anti-CD2/3/28,","
R22216 T28721 T28723 arg1Of ",",and
R22217 T28722 T28721 arg2Of TGF-β,","
R22218 T28723 T28719 arg2Of and,with
R22219 T28724 T28723 arg2Of IL-2,and

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T29050 0-9 JJ denotes Real-time
T29051 10-13 NNP denotes PCR
T29052 14-16 IN denotes of
T29053 17-20 NNP denotes RNA
T29054 21-25 IN denotes from
T29055 26-31 JJ denotes human
T29056 32-37 JJ denotes naive
T29057 38-41 NNP denotes CD4
T29058 41-42 CD denotes +
T29059 43-44 NNP denotes T
T29060 45-50 NNS denotes cells
T29061 50-51 , denotes ,
T29062 52-63 VBN denotes transfected
T29063 64-68 IN denotes with
T29064 69-74 NNP denotes RUNX1
T29065 75-81 CC denotes and/or
T29066 82-87 NNP denotes RUNX3
T29067 88-93 NNP denotes siRNA
T29068 94-96 CC denotes or
T29069 97-101 IN denotes with
T29070 102-103 DT denotes a
T29071 104-111 NN denotes control
T29072 112-117 NNP denotes siRNA
T29073 118-121 CC denotes and
T29074 122-130 VBN denotes cultured
T29075 131-135 IN denotes with
T29076 136-144 JJ denotes anti-CD2
T29077 144-145 NN denotes /
T29078 145-149 CD denotes 3/28
T29079 149-150 , denotes ,
T29080 151-156 NNP denotes TGF-β
T29081 157-160 CC denotes and
T29082 161-165 NNP denotes IL-2
T29083 165-166 . denotes .
R22494 T29050 T29051 amod Real-time,PCR
R22495 T29051 T29051 ROOT PCR,PCR
R22496 T29052 T29051 prep of,PCR
R22497 T29053 T29052 pobj RNA,of
R22498 T29054 T29051 prep from,PCR
R22499 T29055 T29056 npadvmod human,naive
R22500 T29056 T29060 amod naive,cells
R22501 T29057 T29060 nmod CD4,cells
R22502 T29058 T29060 nummod +,cells
R22503 T29059 T29060 compound T,cells
R22504 T29060 T29054 pobj cells,from
R22505 T29061 T29062 punct ",",transfected
R22506 T29062 T29051 acl transfected,PCR
R22507 T29063 T29062 prep with,transfected
R22508 T29064 T29063 pobj RUNX1,with
R22509 T29065 T29064 cc and/or,RUNX1
R22510 T29066 T29067 compound RUNX3,siRNA
R22511 T29067 T29064 conj siRNA,RUNX1
R22512 T29068 T29063 cc or,with
R22513 T29069 T29063 conj with,with
R22514 T29070 T29071 det a,control
R22515 T29071 T29069 pobj control,with
R22516 T29072 T29071 appos siRNA,control
R22517 T29073 T29062 cc and,transfected
R22518 T29074 T29062 conj cultured,transfected
R22519 T29075 T29074 prep with,cultured
R22520 T29076 T29077 compound anti-CD2,/
R22521 T29077 T29075 pobj /,with
R22522 T29078 T29077 nummod 3/28,/
R22523 T29079 T29077 punct ",",/
R22524 T29080 T29077 conj TGF-β,/
R22525 T29081 T29080 cc and,TGF-β
R22526 T29082 T29080 conj IL-2,TGF-β
R22527 T29083 T29051 punct .,PCR

GO-MF

Id Subject Object Predicate Lexical cue
T29358 161-165 http://purl.obolibrary.org/obo/GO_0005134 denotes IL-2

GO-CC

Id Subject Object Predicate Lexical cue
T29364 45-50 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T28596 0-166 Sentence denotes Real-time PCR of RNA from human naive CD4+ T cells, transfected with RUNX1 and/or RUNX3 siRNA or with a control siRNA and cultured with anti-CD2/3/28, TGF-β and IL-2.
T46 0-166 Sentence denotes Real-time PCR of RNA from human naive CD4+ T cells, transfected with RUNX1 and/or RUNX3 siRNA or with a control siRNA and cultured with anti-CD2/3/28, TGF-β and IL-2.

events-check-again

Id Subject Object Predicate Lexical cue
T29408 38-41 Protein denotes CD4
T29409 69-74 Protein denotes RUNX1
T29410 82-87 Protein denotes RUNX3
T29411 88-93 Negative_regulation denotes siRNA
T29412 88-93 Negative_regulation denotes siRNA
T29413 141-144 Protein denotes CD2
T29414 145-146 Protein denotes 3
T29415 147-149 Protein denotes 28
T29416 151-156 Protein denotes TGF-β
T29417 161-165 Protein denotes IL-2
R22784 T29409 T29411 themeOf RUNX1,siRNA
R22785 T29410 T29412 themeOf RUNX3,siRNA

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T29568 38-42 Protein denotes CD4+
T29569 69-74 Protein denotes RUNX1
T29570 82-93 Protein denotes RUNX3 siRNA
T29571 151-156 Protein denotes TGF-β
T29572 161-165 Protein denotes IL-2

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T28540 38-41 Protein denotes CD4
T28541 69-74 Protein denotes RUNX1
T28542 82-87 Protein denotes RUNX3
T28543 88-93 Negative_regulation denotes siRNA
T28544 88-93 Negative_regulation denotes siRNA
T28545 141-144 Protein denotes CD2
T28546 145-146 Protein denotes 3
T28547 147-149 Protein denotes 28
T28548 151-156 Protein denotes TGF-β
T28549 161-165 Protein denotes IL-2
R22075 T28541 T28543 themeOf RUNX1,siRNA
R22076 T28542 T28544 themeOf RUNX3,siRNA

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T28910 38-41 P01730 denotes CD4
T28911 69-74 Q01196 denotes RUNX1
T28912 82-87 Q13761 denotes RUNX3
T28913 141-144 P06729 denotes CD2
T28914 151-156 P01137 denotes TGF-β
T28915 161-165 P60568 denotes IL-2

test2

Id Subject Object Predicate Lexical cue
T28459 38-41 Protein denotes CD4
T28460 69-74 Protein denotes RUNX1
T28461 82-87 Protein denotes RUNX3
T28462 88-93 Negative_regulation denotes siRNA
T28463 141-144 Protein denotes CD2
T28464 145-146 Protein denotes 3
T28465 147-149 Protein denotes 28
T28466 151-156 Protein denotes TGF-β
T28467 161-165 Protein denotes IL-2
R22030 T28460 T28462 themeOf RUNX1,siRNA
R22031 T28461 T28462 themeOf RUNX3,siRNA