PMC:2806624 / 625-841
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T315 | 0-12 | NN | denotes | Inactivation |
| T316 | 13-15 | IN | denotes | of |
| T317 | 16-19 | DT | denotes | the |
| T318 | 20-24 | NN | denotes | gene |
| T319 | 25-33 | VB | denotes | encoding |
| T320 | 34-38 | NN | denotes | RUNX |
| T321 | 39-47 | NN | denotes | cofactor |
| T322 | 48-60 | JJ | denotes | core-binding |
| T323 | 61-69 | NN | denotes | factor-β |
| T324 | 70-71 | -LRB- | denotes | ( |
| T325 | 71-75 | NN | denotes | CBFβ |
| T326 | 75-76 | -RRB- | denotes | ) |
| T327 | 77-79 | IN | denotes | in |
| T328 | 80-84 | NN | denotes | mice |
| T329 | 85-88 | CC | denotes | and |
| T330 | 89-94 | JJ | denotes | small |
| T331 | 95-106 | VB | denotes | interfering |
| T332 | 107-110 | NN | denotes | RNA |
| T333 | 111-112 | -LRB- | denotes | ( |
| T334 | 112-117 | NN | denotes | siRNA |
| T335 | 117-118 | -RRB- | denotes | ) |
| T336 | 118-127 | JJ | denotes | -mediated |
| T337 | 128-139 | NN | denotes | suppression |
| T338 | 140-142 | IN | denotes | of |
| T339 | 143-148 | NN | denotes | RUNX1 |
| T340 | 149-152 | CC | denotes | and |
| T341 | 153-158 | NN | denotes | RUNX3 |
| T342 | 159-161 | IN | denotes | in |
| T343 | 162-167 | JJ | denotes | human |
| T344 | 168-169 | NN | denotes | T |
| T345 | 170-175 | NN | denotes | cells |
| T346 | 176-184 | VB | denotes | resulted |
| T347 | 185-187 | IN | denotes | in |
| T348 | 188-195 | VB | denotes | reduced |
| T349 | 196-206 | NN | denotes | expression |
| T350 | 207-209 | IN | denotes | of |
| T351 | 210-215 | NN | denotes | Foxp3 |
| R173 | T315 | T316 | arg1Of | Inactivation,of |
| R174 | T315 | T327 | arg1Of | Inactivation,in |
| R175 | T318 | T316 | arg2Of | gene,of |
| R176 | T318 | T317 | arg1Of | gene,the |
| R177 | T318 | T319 | arg1Of | gene,encoding |
| R178 | T323 | T319 | arg2Of | factor-β,encoding |
| R179 | T323 | T320 | arg1Of | factor-β,RUNX |
| R180 | T323 | T321 | arg1Of | factor-β,cofactor |
| R181 | T323 | T322 | arg1Of | factor-β,core-binding |
| R182 | T323 | T324 | arg1Of | factor-β,( |
| R183 | T325 | T324 | arg2Of | CBFβ,( |
| R184 | T326 | T324 | arg3Of | ),( |
| R185 | T328 | T329 | arg1Of | mice,and |
| R186 | T329 | T327 | arg2Of | and,in |
| R187 | T332 | T329 | arg2Of | RNA,and |
| R188 | T332 | T330 | arg1Of | RNA,small |
| R189 | T332 | T331 | arg1Of | RNA,interfering |
| R190 | T332 | T333 | arg1Of | RNA,( |
| R191 | T334 | T333 | arg2Of | siRNA,( |
| R192 | T335 | T333 | arg3Of | ),( |
| R193 | T337 | T315 | arg1Of | suppression,Inactivation |
| R194 | T337 | T336 | arg1Of | suppression,-mediated |
| R195 | T337 | T338 | arg1Of | suppression,of |
| R196 | T337 | T346 | arg1Of | suppression,resulted |
| R197 | T339 | T340 | arg1Of | RUNX1,and |
| R198 | T340 | T338 | arg2Of | and,of |
| R199 | T340 | T342 | arg1Of | and,in |
| R200 | T341 | T340 | arg2Of | RUNX3,and |
| R201 | T345 | T342 | arg2Of | cells,in |
| R202 | T345 | T343 | arg1Of | cells,human |
| R203 | T345 | T344 | arg1Of | cells,T |
| R204 | T346 | T347 | arg1Of | resulted,in |
| R205 | T349 | T347 | arg2Of | expression,in |
| R206 | T349 | T348 | arg2Of | expression,reduced |
| R207 | T349 | T350 | arg1Of | expression,of |
| R208 | T351 | T350 | arg2Of | Foxp3,of |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T624 | 0-12 | NN | denotes | Inactivation |
| T625 | 13-15 | IN | denotes | of |
| T626 | 16-19 | DT | denotes | the |
| T627 | 20-24 | NN | denotes | gene |
| T628 | 25-33 | VBG | denotes | encoding |
| T629 | 34-38 | NNP | denotes | RUNX |
| T630 | 39-47 | NN | denotes | cofactor |
| T631 | 48-60 | JJ | denotes | core-binding |
| T632 | 61-69 | NN | denotes | factor-β |
| T633 | 70-71 | -LRB- | denotes | ( |
| T634 | 71-75 | NNP | denotes | CBFβ |
| T635 | 75-76 | -RRB- | denotes | ) |
| T636 | 77-79 | IN | denotes | in |
| T637 | 80-84 | NNS | denotes | mice |
| T638 | 85-88 | CC | denotes | and |
| T639 | 89-94 | JJ | denotes | small |
| T640 | 95-106 | VBG | denotes | interfering |
| T641 | 107-110 | NNP | denotes | RNA |
| T642 | 111-112 | -LRB- | denotes | ( |
| T643 | 112-117 | NNP | denotes | siRNA |
| T644 | 117-118 | -RRB- | denotes | ) |
| T645 | 118-119 | : | denotes | - |
| T646 | 119-127 | VBN | denotes | mediated |
| T647 | 128-139 | NN | denotes | suppression |
| T648 | 140-142 | IN | denotes | of |
| T649 | 143-148 | NNP | denotes | RUNX1 |
| T650 | 149-152 | CC | denotes | and |
| T651 | 153-158 | NNP | denotes | RUNX3 |
| T652 | 159-161 | IN | denotes | in |
| T653 | 162-167 | JJ | denotes | human |
| T654 | 168-169 | NNP | denotes | T |
| T655 | 170-175 | NNS | denotes | cells |
| T656 | 176-184 | VBD | denotes | resulted |
| T657 | 185-187 | IN | denotes | in |
| T658 | 188-195 | VBN | denotes | reduced |
| T659 | 196-206 | NN | denotes | expression |
| T660 | 207-209 | IN | denotes | of |
| T661 | 210-215 | NNP | denotes | Foxp3 |
| T662 | 215-216 | . | denotes | . |
| R419 | T624 | T656 | nsubj | Inactivation,resulted |
| R420 | T625 | T624 | prep | of,Inactivation |
| R421 | T626 | T627 | det | the,gene |
| R422 | T627 | T625 | pobj | gene,of |
| R423 | T628 | T632 | amod | encoding,factor-β |
| R424 | T629 | T632 | nmod | RUNX,factor-β |
| R425 | T630 | T632 | nmod | cofactor,factor-β |
| R426 | T631 | T632 | amod | core-binding,factor-β |
| R427 | T632 | T624 | appos | factor-β,Inactivation |
| R428 | T633 | T634 | punct | (,CBFβ |
| R429 | T634 | T632 | appos | CBFβ,factor-β |
| R430 | T635 | T634 | punct | ),CBFβ |
| R431 | T636 | T632 | prep | in,factor-β |
| R432 | T637 | T636 | pobj | mice,in |
| R433 | T638 | T637 | cc | and,mice |
| R434 | T639 | T641 | amod | small,RNA |
| R435 | T640 | T641 | amod | interfering,RNA |
| R436 | T641 | T637 | conj | RNA,mice |
| R437 | T642 | T643 | punct | (,siRNA |
| R438 | T643 | T641 | appos | siRNA,RNA |
| R439 | T644 | T643 | punct | ),siRNA |
| R440 | T645 | T646 | punct | -,mediated |
| R441 | T646 | T647 | amod | mediated,suppression |
| R442 | T647 | T632 | conj | suppression,factor-β |
| R443 | T648 | T647 | prep | of,suppression |
| R444 | T649 | T648 | pobj | RUNX1,of |
| R445 | T650 | T649 | cc | and,RUNX1 |
| R446 | T651 | T649 | conj | RUNX3,RUNX1 |
| R447 | T652 | T647 | prep | in,suppression |
| R448 | T653 | T655 | amod | human,cells |
| R449 | T654 | T655 | compound | T,cells |
| R450 | T655 | T652 | pobj | cells,in |
| R451 | T656 | T656 | ROOT | resulted,resulted |
| R452 | T657 | T656 | prep | in,resulted |
| R453 | T658 | T659 | amod | reduced,expression |
| R454 | T659 | T657 | pobj | expression,in |
| R455 | T660 | T659 | prep | of,expression |
| R456 | T661 | T660 | pobj | Foxp3,of |
| R457 | T662 | T656 | punct | .,resulted |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T871 | 53-60 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T875 | 170-175 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T885 | 48-52 | http://purl.obolibrary.org/obo/GO_0019013 | denotes | core |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T142 | 0-216 | Sentence | denotes | Inactivation of the gene encoding RUNX cofactor core-binding factor-β (CBFβ) in mice and small interfering RNA (siRNA)-mediated suppression of RUNX1 and RUNX3 in human T cells resulted in reduced expression of Foxp3. |
| T6 | 0-216 | Sentence | denotes | Inactivation of the gene encoding RUNX cofactor core-binding factor-β (CBFβ) in mice and small interfering RNA (siRNA)-mediated suppression of RUNX1 and RUNX3 in human T cells resulted in reduced expression of Foxp3. |
events-check-again
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T984 | 0-12 | Negative_regulation | denotes | Inactivation |
| T985 | 34-38 | Protein | denotes | RUNX |
| T986 | 48-69 | Protein | denotes | core-binding factor-β |
| T987 | 71-75 | Protein | denotes | CBFβ |
| T988 | 119-127 | Positive_regulation | denotes | mediated |
| T989 | 119-127 | Positive_regulation | denotes | mediated |
| T990 | 128-139 | Negative_regulation | denotes | suppression |
| T991 | 128-139 | Negative_regulation | denotes | suppression |
| T992 | 143-148 | Protein | denotes | RUNX1 |
| T993 | 153-158 | Protein | denotes | RUNX3 |
| T994 | 188-195 | Negative_regulation | denotes | reduced |
| T995 | 188-195 | Negative_regulation | denotes | reduced |
| T996 | 188-195 | Negative_regulation | denotes | reduced |
| T997 | 196-206 | Gene_expression | denotes | expression |
| T998 | 210-215 | Protein | denotes | Foxp3 |
| R682 | T984 | T994 | causeOf | Inactivation,reduced |
| R683 | T986 | T984 | themeOf | core-binding factor-β,Inactivation |
| R684 | T986 | T990 | themeOf | core-binding factor-β,suppression |
| R685 | T987 | T986 | equivalentTo | CBFβ,core-binding factor-β |
| R686 | T990 | T988 | themeOf | suppression,mediated |
| R687 | T990 | T995 | causeOf | suppression,reduced |
| R688 | T991 | T989 | themeOf | suppression,mediated |
| R689 | T991 | T996 | causeOf | suppression,reduced |
| R690 | T993 | T991 | themeOf | RUNX3,suppression |
| R691 | T997 | T994 | themeOf | expression,reduced |
| R692 | T997 | T995 | themeOf | expression,reduced |
| R693 | T997 | T996 | themeOf | expression,reduced |
| R694 | T998 | T997 | themeOf | Foxp3,expression |
bionlp-st-ge-2016-reference
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T149 | 119-127 | Positive_regulation | denotes | mediated |
| T150 | 128-139 | Negative_regulation | denotes | suppression |
| T151 | 119-127 | Positive_regulation | denotes | mediated |
| T152 | 128-139 | Negative_regulation | denotes | suppression |
| T153 | 188-195 | Negative_regulation | denotes | reduced |
| T154 | 196-206 | Gene_expression | denotes | expression |
| T155 | 188-195 | Negative_regulation | denotes | reduced |
| T156 | 188-195 | Negative_regulation | denotes | reduced |
| T174 | 0-12 | Negative_regulation | denotes | Inactivation |
| T182 | 34-38 | Protein | denotes | RUNX |
| T183 | 48-69 | Protein | denotes | core-binding factor-β |
| T184 | 71-75 | Protein | denotes | CBFβ |
| T185 | 143-148 | Protein | denotes | RUNX1 |
| T187 | 153-158 | Protein | denotes | RUNX3 |
| T188 | 210-215 | Protein | denotes | Foxp3 |
| R50 | T150 | T149 | themeOf | suppression,mediated |
| R51 | T150 | T155 | causeOf | suppression,reduced |
| R52 | T152 | T151 | themeOf | suppression,mediated |
| R53 | T152 | T156 | causeOf | suppression,reduced |
| R54 | T154 | T153 | themeOf | expression,reduced |
| R55 | T154 | T155 | themeOf | expression,reduced |
| R56 | T154 | T156 | themeOf | expression,reduced |
| R63 | T174 | T153 | causeOf | Inactivation,reduced |
| R734 | T183 | T174 | themeOf | core-binding factor-β,Inactivation |
| R735 | T183 | T150 | themeOf | core-binding factor-β,suppression |
| R736 | T184 | T183 | equivalentTo | CBFβ,core-binding factor-β |
| R737 | T187 | T152 | themeOf | RUNX3,suppression |
| R738 | T188 | T154 | themeOf | Foxp3,expression |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T481 | 34-38 | Q13950 | denotes | RUNX |
| T482 | 34-38 | Q01196 | denotes | RUNX |
| T483 | 34-38 | Q13761 | denotes | RUNX |
| T484 | 71-75 | Q13951 | denotes | CBFβ |
| T485 | 143-148 | Q01196 | denotes | RUNX1 |
| T486 | 153-158 | Q13761 | denotes | RUNX3 |
| T487 | 210-215 | Q9BZS1 | denotes | Foxp3 |
test2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T95 | 0-12 | Negative_regulation | denotes | Inactivation |
| T96 | 34-38 | Protein | denotes | RUNX |
| T97 | 48-69 | Protein | denotes | core-binding factor-β |
| T98 | 71-75 | Protein | denotes | CBFβ |
| T99 | 119-127 | Positive_regulation | denotes | mediated |
| T100 | 128-139 | Negative_regulation | denotes | suppression |
| T101 | 143-148 | Protein | denotes | RUNX1 |
| T102 | 153-158 | Protein | denotes | RUNX3 |
| T103 | 176-184 | Positive_regulation | denotes | resulted |
| T104 | 188-195 | Negative_regulation | denotes | reduced |
| T105 | 196-206 | Gene_expression | denotes | expression |
| T106 | 210-215 | Protein | denotes | Foxp3 |
| R721 | T95 | T103 | causeOf | Inactivation,resulted |
| R722 | T95 | T104 | causeOf | Inactivation,reduced |
| R723 | T97 | T95 | themeOf | core-binding factor-β,Inactivation |
| R724 | T98 | T97 | equivalentTo | CBFβ,core-binding factor-β |
| R725 | T100 | T99 | themeOf | suppression,mediated |
| R726 | T100 | T104 | causeOf | suppression,reduced |
| R727 | T101 | T100 | themeOf | RUNX1,suppression |
| R728 | T102 | T100 | themeOf | RUNX3,suppression |
| R729 | T105 | T104 | themeOf | expression,reduced |
| R730 | T106 | T105 | themeOf | Foxp3,expression |