PMC:2806624 / 57074-57258
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T27546 | 0-4 | NN | denotes | Fig. |
| T27547 | 5-7 | NN | denotes | S2 |
| T27548 | 8-13 | NN | denotes | shows |
| T27549 | 14-23 | VB | denotes | decreased |
| T27550 | 24-29 | NN | denotes | RUNX1 |
| T27551 | 30-33 | CC | denotes | and |
| T27552 | 34-39 | NN | denotes | RUNX3 |
| T27553 | 40-44 | NN | denotes | mRNA |
| T27554 | 45-48 | CC | denotes | and |
| T27555 | 49-56 | NN | denotes | protein |
| T27556 | 57-67 | NN | denotes | expression |
| T27557 | 68-73 | IN | denotes | after |
| T27558 | 74-88 | JJ | denotes | siRNA-mediated |
| T27559 | 89-98 | NN | denotes | knockdown |
| T27560 | 99-102 | CC | denotes | and |
| T27561 | 103-112 | VB | denotes | decreased |
| T27562 | 113-118 | NN | denotes | FOXP3 |
| T27563 | 119-129 | NN | denotes | expression |
| T27564 | 130-132 | IN | denotes | in |
| T27565 | 133-138 | JJ | denotes | human |
| T27566 | 139-143 | JJ | denotes | CD4+ |
| T27567 | 144-145 | NN | denotes | T |
| T27568 | 146-151 | NN | denotes | cells |
| T27569 | 152-157 | IN | denotes | after |
| T27570 | 158-163 | NN | denotes | RUNX1 |
| T27571 | 164-167 | CC | denotes | and |
| T27572 | 168-173 | NN | denotes | RUNX3 |
| T27573 | 174-183 | NN | denotes | knockdown |
| R21401 | T27548 | T27546 | arg1Of | shows,Fig. |
| R21402 | T27548 | T27547 | arg1Of | shows,S2 |
| R21403 | T27548 | T27549 | arg1Of | shows,decreased |
| R21404 | T27548 | T27561 | arg1Of | shows,decreased |
| R21405 | T27549 | T27557 | arg1Of | decreased,after |
| R21406 | T27549 | T27560 | arg1Of | decreased,and |
| R21407 | T27550 | T27551 | arg1Of | RUNX1,and |
| R21408 | T27552 | T27551 | arg2Of | RUNX3,and |
| R21409 | T27553 | T27550 | arg1Of | mRNA,RUNX1 |
| R21410 | T27553 | T27552 | arg1Of | mRNA,RUNX3 |
| R21411 | T27553 | T27554 | arg1Of | mRNA,and |
| R21412 | T27554 | T27549 | arg2Of | and,decreased |
| R21413 | T27556 | T27554 | arg2Of | expression,and |
| R21414 | T27556 | T27555 | arg1Of | expression,protein |
| R21415 | T27559 | T27557 | arg2Of | knockdown,after |
| R21416 | T27559 | T27558 | arg1Of | knockdown,siRNA-mediated |
| R21417 | T27561 | T27560 | arg2Of | decreased,and |
| R21418 | T27561 | T27564 | arg1Of | decreased,in |
| R21419 | T27561 | T27569 | arg1Of | decreased,after |
| R21420 | T27563 | T27561 | arg2Of | expression,decreased |
| R21421 | T27563 | T27562 | arg1Of | expression,FOXP3 |
| R21422 | T27568 | T27564 | arg2Of | cells,in |
| R21423 | T27568 | T27565 | arg1Of | cells,human |
| R21424 | T27568 | T27566 | arg1Of | cells,CD4+ |
| R21425 | T27568 | T27567 | arg1Of | cells,T |
| R21426 | T27570 | T27571 | arg1Of | RUNX1,and |
| R21427 | T27572 | T27571 | arg2Of | RUNX3,and |
| R21428 | T27573 | T27569 | arg2Of | knockdown,after |
| R21429 | T27573 | T27570 | arg1Of | knockdown,RUNX1 |
| R21430 | T27573 | T27572 | arg1Of | knockdown,RUNX3 |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T27819 | 0-3 | NNP | denotes | Fig |
| T27820 | 3-4 | . | denotes | . |
| T27821 | 5-7 | CD | denotes | S2 |
| T27822 | 8-13 | NNS | denotes | shows |
| T27823 | 14-23 | VBD | denotes | decreased |
| T27824 | 24-29 | NNP | denotes | RUNX1 |
| T27825 | 30-33 | CC | denotes | and |
| T27826 | 34-39 | NNP | denotes | RUNX3 |
| T27827 | 40-44 | NNP | denotes | mRNA |
| T27828 | 45-48 | CC | denotes | and |
| T27829 | 49-56 | NN | denotes | protein |
| T27830 | 57-67 | NN | denotes | expression |
| T27831 | 68-73 | IN | denotes | after |
| T27832 | 74-88 | JJ | denotes | siRNA-mediated |
| T27833 | 89-98 | NN | denotes | knockdown |
| T27834 | 99-102 | CC | denotes | and |
| T27835 | 103-112 | VBD | denotes | decreased |
| T27836 | 113-118 | CD | denotes | FOXP3 |
| T27837 | 119-129 | NN | denotes | expression |
| T27838 | 130-132 | IN | denotes | in |
| T27839 | 133-138 | JJ | denotes | human |
| T27840 | 139-142 | NNP | denotes | CD4 |
| T27841 | 142-143 | CD | denotes | + |
| T27842 | 144-145 | NNP | denotes | T |
| T27843 | 146-151 | NNS | denotes | cells |
| T27844 | 152-157 | IN | denotes | after |
| T27845 | 158-163 | NNP | denotes | RUNX1 |
| T27846 | 164-167 | CC | denotes | and |
| T27847 | 168-173 | NNP | denotes | RUNX3 |
| T27848 | 174-183 | NN | denotes | knockdown |
| T27849 | 183-184 | . | denotes | . |
| R21621 | T27819 | T27819 | ROOT | Fig,Fig |
| R21622 | T27820 | T27819 | punct | .,Fig |
| R21623 | T27821 | T27822 | nummod | S2,shows |
| R21624 | T27822 | T27823 | nsubj | shows,decreased |
| R21625 | T27823 | T27823 | ROOT | decreased,decreased |
| R21626 | T27824 | T27823 | dobj | RUNX1,decreased |
| R21627 | T27825 | T27824 | cc | and,RUNX1 |
| R21628 | T27826 | T27827 | compound | RUNX3,mRNA |
| R21629 | T27827 | T27824 | conj | mRNA,RUNX1 |
| R21630 | T27828 | T27827 | cc | and,mRNA |
| R21631 | T27829 | T27830 | compound | protein,expression |
| R21632 | T27830 | T27823 | dobj | expression,decreased |
| R21633 | T27831 | T27830 | prep | after,expression |
| R21634 | T27832 | T27833 | amod | siRNA-mediated,knockdown |
| R21635 | T27833 | T27831 | pobj | knockdown,after |
| R21636 | T27834 | T27823 | cc | and,decreased |
| R21637 | T27835 | T27823 | conj | decreased,decreased |
| R21638 | T27836 | T27837 | nummod | FOXP3,expression |
| R21639 | T27837 | T27835 | dobj | expression,decreased |
| R21640 | T27838 | T27835 | prep | in,decreased |
| R21641 | T27839 | T27842 | amod | human,T |
| R21642 | T27840 | T27842 | compound | CD4,T |
| R21643 | T27841 | T27842 | compound | +,T |
| R21644 | T27842 | T27843 | compound | T,cells |
| R21645 | T27843 | T27838 | pobj | cells,in |
| R21646 | T27844 | T27835 | prep | after,decreased |
| R21647 | T27845 | T27848 | nmod | RUNX1,knockdown |
| R21648 | T27846 | T27845 | cc | and,RUNX1 |
| R21649 | T27847 | T27845 | conj | RUNX3,RUNX1 |
| R21650 | T27848 | T27844 | pobj | knockdown,after |
| R21651 | T27849 | T27823 | punct | .,decreased |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T28031 | 146-151 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T27512 | 0-184 | Sentence | denotes | Fig. S2 shows decreased RUNX1 and RUNX3 mRNA and protein expression after siRNA-mediated knockdown and decreased FOXP3 expression in human CD4+ T cells after RUNX1 and RUNX3 knockdown. |
| T393 | 0-184 | Sentence | denotes | Fig. S2 shows decreased RUNX1 and RUNX3 mRNA and protein expression after siRNA-mediated knockdown and decreased FOXP3 expression in human CD4+ T cells after RUNX1 and RUNX3 knockdown. |
events-check-again
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T28277 | 14-23 | Negative_regulation | denotes | decreased |
| T28278 | 14-23 | Negative_regulation | denotes | decreased |
| T28279 | 14-23 | Negative_regulation | denotes | decreased |
| T28280 | 14-23 | Negative_regulation | denotes | decreased |
| T28281 | 14-23 | Negative_regulation | denotes | decreased |
| T28282 | 14-23 | Negative_regulation | denotes | decreased |
| T28283 | 24-29 | Protein | denotes | RUNX1 |
| T28284 | 34-39 | Protein | denotes | RUNX3 |
| T28285 | 40-44 | Transcription | denotes | mRNA |
| T28286 | 40-44 | Transcription | denotes | mRNA |
| T28287 | 80-88 | Positive_regulation | denotes | mediated |
| T28288 | 89-98 | Negative_regulation | denotes | knockdown |
| T28289 | 103-112 | Negative_regulation | denotes | decreased |
| T28290 | 103-112 | Negative_regulation | denotes | decreased |
| T28291 | 113-118 | Protein | denotes | FOXP3 |
| T28292 | 119-129 | Gene_expression | denotes | expression |
| T28293 | 139-142 | Protein | denotes | CD4 |
| T28294 | 158-163 | Protein | denotes | RUNX1 |
| T28295 | 168-173 | Protein | denotes | RUNX3 |
| T28296 | 174-183 | Negative_regulation | denotes | knockdown |
| T28297 | 174-183 | Negative_regulation | denotes | knockdown |
| R21937 | T28283 | T28285 | themeOf | RUNX1,mRNA |
| R21938 | T28284 | T28286 | themeOf | RUNX3,mRNA |
| R21939 | T28285 | T28277 | themeOf | mRNA,decreased |
| R21940 | T28285 | T28279 | themeOf | mRNA,decreased |
| R21941 | T28285 | T28278 | themeOf | mRNA,decreased |
| R21942 | T28286 | T28280 | themeOf | mRNA,decreased |
| R21943 | T28286 | T28282 | themeOf | mRNA,decreased |
| R21944 | T28286 | T28281 | themeOf | mRNA,decreased |
| R21945 | T28288 | T28280 | causeOf | knockdown,decreased |
| R21946 | T28288 | T28287 | themeOf | knockdown,mediated |
| R21947 | T28288 | T28278 | causeOf | knockdown,decreased |
| R21948 | T28289 | T28277 | causeOf | decreased,decreased |
| R21949 | T28289 | T28282 | causeOf | decreased,decreased |
| R21950 | T28290 | T28279 | causeOf | decreased,decreased |
| R21951 | T28290 | T28281 | causeOf | decreased,decreased |
| R21952 | T28291 | T28292 | themeOf | FOXP3,expression |
| R21953 | T28292 | T28288 | themeOf | expression,knockdown |
| R21954 | T28292 | T28289 | themeOf | expression,decreased |
| R21955 | T28292 | T28290 | themeOf | expression,decreased |
| R21956 | T28294 | T28296 | themeOf | RUNX1,knockdown |
| R21957 | T28295 | T28297 | themeOf | RUNX3,knockdown |
| R21958 | T28296 | T28289 | causeOf | knockdown,decreased |
| R21959 | T28297 | T28290 | causeOf | knockdown,decreased |
bionlp-st-ge-2016-reference-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T28123 | 0-3 | Protein | denotes | Fig |
| T28124 | 24-29 | Protein | denotes | RUNX1 |
| T28125 | 34-44 | Protein | denotes | RUNX3 mRNA |
| T28126 | 113-118 | Protein | denotes | FOXP3 |
| T28127 | 133-145 | Protein | denotes | human CD4+ T |
| T28128 | 158-163 | Protein | denotes | RUNX1 |
| T28129 | 168-183 | Protein | denotes | RUNX3 knockdown |
| T28130 | 57-67 | Gene_expression | denotes | expression |
| T28131 | 57-67 | Gene_expression | denotes | expression |
| T28132 | 119-129 | Gene_expression | denotes | expression |
| T28133 | 103-112 | Negative_regulation | denotes | decreased |
| T28134 | 103-112 | Negative_regulation | denotes | decreased |
| R21867 | T28124 | T28130 | themeOf | RUNX1,expression |
| R21868 | T28125 | T28131 | themeOf | RUNX3 mRNA,expression |
| R21869 | T28126 | T28132 | themeOf | FOXP3,expression |
| R21870 | T28128 | T28133 | causeOf | RUNX1,decreased |
| R21871 | T28129 | T28134 | causeOf | RUNX3 knockdown,decreased |
| R21872 | T28132 | T28133 | themeOf | expression,decreased |
| R21873 | T28132 | T28134 | themeOf | expression,decreased |
bionlp-st-ge-2016-reference
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T27452 | 14-23 | Negative_regulation | denotes | decreased |
| T27453 | 14-23 | Negative_regulation | denotes | decreased |
| T27454 | 24-29 | Protein | denotes | RUNX1 |
| T27455 | 34-39 | Protein | denotes | RUNX3 |
| T27456 | 40-44 | Transcription | denotes | mRNA |
| T27457 | 40-44 | Transcription | denotes | mRNA |
| T27458 | 80-88 | Positive_regulation | denotes | mediated |
| T27459 | 89-98 | Negative_regulation | denotes | knockdown |
| T27460 | 103-112 | Negative_regulation | denotes | decreased |
| T27461 | 103-112 | Negative_regulation | denotes | decreased |
| T27462 | 113-118 | Protein | denotes | FOXP3 |
| T27463 | 119-129 | Gene_expression | denotes | expression |
| T27464 | 139-142 | Protein | denotes | CD4 |
| T27465 | 158-163 | Protein | denotes | RUNX1 |
| T27466 | 168-173 | Protein | denotes | RUNX3 |
| T27467 | 174-183 | Negative_regulation | denotes | knockdown |
| T27468 | 174-183 | Negative_regulation | denotes | knockdown |
| T27448 | 14-23 | Negative_regulation | denotes | decreased |
| T27449 | 14-23 | Negative_regulation | denotes | decreased |
| T27450 | 14-23 | Negative_regulation | denotes | decreased |
| T27451 | 14-23 | Negative_regulation | denotes | decreased |
| R21353 | T27461 | T27450 | causeOf | decreased,decreased |
| R21354 | T27461 | T27452 | causeOf | decreased,decreased |
| R21355 | T27462 | T27463 | themeOf | FOXP3,expression |
| R21356 | T27463 | T27459 | themeOf | expression,knockdown |
| R21357 | T27463 | T27460 | themeOf | expression,decreased |
| R21358 | T27463 | T27461 | themeOf | expression,decreased |
| R21359 | T27465 | T27467 | themeOf | RUNX1,knockdown |
| R21360 | T27466 | T27468 | themeOf | RUNX3,knockdown |
| R21361 | T27467 | T27460 | causeOf | knockdown,decreased |
| R21362 | T27468 | T27461 | causeOf | knockdown,decreased |
| R21340 | T27454 | T27456 | themeOf | RUNX1,mRNA |
| R21341 | T27455 | T27457 | themeOf | RUNX3,mRNA |
| R21342 | T27456 | T27448 | themeOf | mRNA,decreased |
| R21343 | T27456 | T27450 | themeOf | mRNA,decreased |
| R21344 | T27456 | T27449 | themeOf | mRNA,decreased |
| R21345 | T27457 | T27451 | themeOf | mRNA,decreased |
| R21346 | T27457 | T27453 | themeOf | mRNA,decreased |
| R21347 | T27457 | T27452 | themeOf | mRNA,decreased |
| R21348 | T27459 | T27451 | causeOf | knockdown,decreased |
| R21349 | T27459 | T27458 | themeOf | knockdown,mediated |
| R21350 | T27459 | T27449 | causeOf | knockdown,decreased |
| R21351 | T27460 | T27448 | causeOf | decreased,decreased |
| R21352 | T27460 | T27453 | causeOf | decreased,decreased |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T27736 | 24-29 | Q01196 | denotes | RUNX1 |
| T27737 | 34-39 | Q13761 | denotes | RUNX3 |
| T27738 | 113-118 | Q9BZS1 | denotes | FOXP3 |
| T27739 | 139-142 | P01730 | denotes | CD4 |
| T27740 | 158-163 | Q01196 | denotes | RUNX1 |
| T27741 | 168-173 | Q13761 | denotes | RUNX3 |
test2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T27386 | 14-23 | Negative_regulation | denotes | decreased |
| T27387 | 24-29 | Protein | denotes | RUNX1 |
| T27388 | 34-39 | Protein | denotes | RUNX3 |
| T27389 | 57-67 | Gene_expression | denotes | expression |
| T27390 | 103-112 | Negative_regulation | denotes | decreased |
| T27391 | 113-118 | Protein | denotes | FOXP3 |
| T27392 | 119-129 | Gene_expression | denotes | expression |
| T27393 | 139-142 | Protein | denotes | CD4 |
| T27394 | 158-163 | Protein | denotes | RUNX1 |
| T27395 | 168-173 | Protein | denotes | RUNX3 |
| T27396 | 174-183 | Negative_regulation | denotes | knockdown |
| R21315 | T27387 | T27389 | themeOf | RUNX1,expression |
| R21316 | T27388 | T27389 | themeOf | RUNX3,expression |
| R21317 | T27389 | T27386 | themeOf | expression,decreased |
| R21318 | T27390 | T27386 | causeOf | decreased,decreased |
| R21319 | T27391 | T27392 | themeOf | FOXP3,expression |
| R21320 | T27392 | T27390 | themeOf | expression,decreased |
| R21321 | T27394 | T27396 | themeOf | RUNX1,knockdown |
| R21322 | T27395 | T27396 | themeOf | RUNX3,knockdown |
| R21323 | T27396 | T27386 | causeOf | knockdown,decreased |
| R21324 | T27396 | T27390 | causeOf | knockdown,decreased |