> top > docs > PMC:2806624 > spans > 51869-52014 > annotations

PMC:2806624 / 51869-52014 JSONTXT

Annnotations TAB JSON ListView MergeView

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T25373 0-7 NN denotes HEK293T
T25374 8-13 NN denotes cells
T25375 14-18 VB denotes were
T25376 19-30 VB denotes transfected
T25377 31-35 IN denotes with
T25378 36-41 NN denotes RUNX1
T25379 42-44 CC denotes or
T25380 45-50 NN denotes RUNX3
T25381 51-56 VB denotes using
T25382 57-60 DT denotes the
T25383 61-74 NN denotes Lipofectamine
T25384 75-79 CD denotes 2000
T25385 80-87 NN denotes reagent
T25386 88-89 -LRB- denotes (
T25387 89-99 NN denotes Invitrogen
T25388 99-100 -RRB- denotes )
T25389 101-110 VB denotes according
T25390 111-113 TO denotes to
T25391 114-117 DT denotes the
T25392 118-130 NN denotes manufacturer
T25393 130-132 POS denotes 's
T25394 133-144 NN denotes instruction
R19717 T25374 T25373 arg1Of cells,HEK293T
R19718 T25374 T25375 arg1Of cells,were
R19719 T25374 T25376 arg2Of cells,transfected
R19720 T25376 T25375 arg2Of transfected,were
R19721 T25376 T25377 arg1Of transfected,with
R19722 T25376 T25389 arg1Of transfected,according
R19723 T25378 T25379 arg1Of RUNX1,or
R19724 T25379 T25377 arg2Of or,with
R19725 T25379 T25381 arg1Of or,using
R19726 T25380 T25379 arg2Of RUNX3,or
R19727 T25385 T25381 arg2Of reagent,using
R19728 T25385 T25382 arg1Of reagent,the
R19729 T25385 T25383 arg1Of reagent,Lipofectamine
R19730 T25385 T25384 arg1Of reagent,2000
R19731 T25385 T25386 arg1Of reagent,(
R19732 T25387 T25386 arg2Of Invitrogen,(
R19733 T25388 T25386 arg3Of ),(
R19734 T25390 T25389 arg2Of to,according
R19735 T25392 T25391 arg1Of manufacturer,the
R19736 T25392 T25393 arg2Of manufacturer,'s
R19737 T25394 T25390 arg2Of instruction,to
R19738 T25394 T25393 arg1Of instruction,'s

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T25582 0-7 CD denotes HEK293T
T25583 8-13 NNS denotes cells
T25584 14-18 VBD denotes were
T25585 19-30 VBN denotes transfected
T25586 31-35 IN denotes with
T25587 36-41 CD denotes RUNX1
T25588 42-44 CC denotes or
T25589 45-50 CD denotes RUNX3
T25590 51-56 VBG denotes using
T25591 57-60 DT denotes the
T25592 61-74 NNP denotes Lipofectamine
T25593 75-79 CD denotes 2000
T25594 80-87 NN denotes reagent
T25595 88-89 -LRB- denotes (
T25596 89-99 NNP denotes Invitrogen
T25597 99-100 -RRB- denotes )
T25598 101-110 VBG denotes according
T25599 111-113 TO denotes to
T25600 114-117 DT denotes the
T25601 118-130 NN denotes manufacturer
T25602 130-132 POS denotes 's
T25603 133-144 NN denotes instruction
T25604 144-145 . denotes .
R19917 T25582 T25583 nummod HEK293T,cells
R19918 T25583 T25585 nsubjpass cells,transfected
R19919 T25584 T25585 auxpass were,transfected
R19920 T25585 T25585 ROOT transfected,transfected
R19921 T25586 T25585 prep with,transfected
R19922 T25587 T25590 nsubj RUNX1,using
R19923 T25588 T25587 cc or,RUNX1
R19924 T25589 T25587 conj RUNX3,RUNX1
R19925 T25590 T25586 pcomp using,with
R19926 T25591 T25592 det the,Lipofectamine
R19927 T25592 T25594 nmod Lipofectamine,reagent
R19928 T25593 T25594 nummod 2000,reagent
R19929 T25594 T25590 dobj reagent,using
R19930 T25595 T25594 punct (,reagent
R19931 T25596 T25594 appos Invitrogen,reagent
R19932 T25597 T25594 punct ),reagent
R19933 T25598 T25585 prep according,transfected
R19934 T25599 T25598 prep to,according
R19935 T25600 T25601 det the,manufacturer
R19936 T25601 T25603 poss manufacturer,instruction
R19937 T25602 T25601 case 's,manufacturer
R19938 T25603 T25599 pobj instruction,to
R19939 T25604 T25585 punct .,transfected

GO-CC

Id Subject Object Predicate Lexical cue
T25785 8-13 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T25365 0-145 Sentence denotes HEK293T cells were transfected with RUNX1 or RUNX3 using the Lipofectamine 2000 reagent (Invitrogen) according to the manufacturer's instruction.
T356 0-145 Sentence denotes HEK293T cells were transfected with RUNX1 or RUNX3 using the Lipofectamine 2000 reagent (Invitrogen) according to the manufacturer's instruction.

events-check-again

Id Subject Object Predicate Lexical cue
T25810 19-30 Gene_expression denotes transfected
T25811 19-30 Gene_expression denotes transfected
T25812 36-41 Protein denotes RUNX1
T25813 45-50 Protein denotes RUNX3
R20125 T25812 T25811 themeOf RUNX1,transfected
R20126 T25813 T25810 themeOf RUNX3,transfected

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T25796 36-41 Protein denotes RUNX1
T25797 45-50 Protein denotes RUNX3
T25798 19-30 Gene_expression denotes transfected
T25799 19-30 Gene_expression denotes transfected
R20119 T25796 T25798 themeOf RUNX1,transfected
R20120 T25797 T25799 themeOf RUNX3,transfected

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T25358 19-30 Gene_expression denotes transfected
T25359 19-30 Gene_expression denotes transfected
T25360 36-41 Protein denotes RUNX1
T25361 45-50 Protein denotes RUNX3
R19714 T25360 T25359 themeOf RUNX1,transfected
R19715 T25361 T25358 themeOf RUNX3,transfected

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T25564 36-41 Q01196 denotes RUNX1
T25565 45-50 Q13761 denotes RUNX3

test2

Id Subject Object Predicate Lexical cue
T25353 19-30 Gene_expression denotes transfected
T25354 36-41 Protein denotes RUNX1
T25355 45-50 Protein denotes RUNX3
R19712 T25354 T25353 themeOf RUNX1,transfected
R19713 T25355 T25353 themeOf RUNX3,transfected