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PMC:2806624 / 4882-5089 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1880 0-4 NN denotes RUNX
T1881 5-13 NN denotes proteins
T1882 14-28 VB denotes heterodimerize
T1883 29-33 IN denotes with
T1884 34-37 DT denotes the
T1885 38-53 JJ denotes non–DNA-binding
T1886 54-61 NN denotes partner
T1887 61-62 -COMMA- denotes ,
T1888 63-67 NN denotes CBFβ
T1889 67-68 -COMMA- denotes ,
T1890 69-74 WDT denotes which
T1891 75-84 VB denotes increases
T1892 85-88 DT denotes the
T1893 89-97 NN denotes affinity
T1894 98-101 IN denotes for
T1895 102-105 NN denotes DNA
T1896 106-113 NN denotes binding
T1897 114-117 CC denotes and
T1898 118-128 VB denotes stabilizes
T1899 129-132 DT denotes the
T1900 133-140 NN denotes complex
T1901 141-143 IN denotes by
T1902 144-154 VB denotes preventing
T1903 155-174 JJ denotes ubiquitin-dependent
T1904 175-186 NN denotes degradation
T1905 187-188 -LRB- denotes (
T1906 188-192 NNP denotes Wang
T1907 193-195 FW denotes et
T1908 196-199 FW denotes al.
T1909 199-200 -COMMA- denotes ,
T1910 201-205 CD denotes 1993
T1911 205-206 -RRB- denotes )
R1461 T1881 T1880 arg1Of proteins,RUNX
R1462 T1881 T1882 arg1Of proteins,heterodimerize
R1463 T1882 T1883 arg1Of heterodimerize,with
R1464 T1886 T1883 arg2Of partner,with
R1465 T1886 T1884 arg1Of partner,the
R1466 T1886 T1885 arg1Of partner,non–DNA-binding
R1467 T1886 T1887 arg1Of partner,","
R1468 T1886 T1889 arg1Of partner,","
R1469 T1886 T1890 arg1Of partner,which
R1470 T1886 T1891 arg1Of partner,increases
R1471 T1886 T1898 arg1Of partner,stabilizes
R1472 T1886 T1902 arg1Of partner,preventing
R1473 T1888 T1887 arg2Of CBFβ,","
R1474 T1891 T1897 arg1Of increases,and
R1475 T1893 T1891 arg2Of affinity,increases
R1476 T1893 T1892 arg1Of affinity,the
R1477 T1893 T1894 arg1Of affinity,for
R1478 T1896 T1894 arg2Of binding,for
R1479 T1896 T1895 arg1Of binding,DNA
R1480 T1898 T1897 arg2Of stabilizes,and
R1481 T1898 T1901 arg1Of stabilizes,by
R1482 T1900 T1898 arg2Of complex,stabilizes
R1483 T1900 T1899 arg1Of complex,the
R1484 T1902 T1901 arg2Of preventing,by
R1485 T1902 T1905 arg1Of preventing,(
R1486 T1904 T1902 arg2Of degradation,preventing
R1487 T1904 T1903 arg1Of degradation,ubiquitin-dependent
R1488 T1906 T1905 arg2Of Wang,(
R1489 T1906 T1907 arg1Of Wang,et
R1490 T1906 T1908 arg1Of Wang,al.
R1491 T1906 T1909 arg1Of Wang,","
R1492 T1910 T1909 arg2Of 1993,","
R1493 T1911 T1905 arg3Of ),(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2725 0-4 NNP denotes RUNX
T2726 5-13 NNS denotes proteins
T2727 14-28 VBP denotes heterodimerize
T2728 29-33 IN denotes with
T2729 34-37 DT denotes the
T2730 38-41 NN denotes non
T2731 42-53 JJ denotes DNA-binding
T2732 54-61 NN denotes partner
T2733 61-62 , denotes ,
T2734 63-67 NNP denotes CBFβ
T2735 67-68 , denotes ,
T2736 69-74 WDT denotes which
T2737 75-84 VBZ denotes increases
T2738 85-88 DT denotes the
T2739 89-97 NN denotes affinity
T2740 98-101 IN denotes for
T2741 102-105 NNP denotes DNA
T2742 106-113 JJ denotes binding
T2743 114-117 CC denotes and
T2744 118-128 VBZ denotes stabilizes
T2745 129-132 DT denotes the
T2746 133-140 JJ denotes complex
T2747 141-143 IN denotes by
T2748 144-154 VBG denotes preventing
T2749 155-174 JJ denotes ubiquitin-dependent
T2750 175-186 NN denotes degradation
T2751 187-188 -LRB- denotes (
T2752 188-192 NNP denotes Wang
T2753 193-195 FW denotes et
T2754 196-199 FW denotes al.
T2755 199-200 , denotes ,
T2756 201-205 CD denotes 1993
T2757 205-206 -RRB- denotes )
T2758 206-207 . denotes .
R2164 T2725 T2726 compound RUNX,proteins
R2165 T2726 T2727 nsubj proteins,heterodimerize
R2167 T2727 T2727 ROOT heterodimerize,heterodimerize
R2168 T2728 T2727 prep with,heterodimerize
R2169 T2729 T2730 det the,non
R2171 T2730 T2728 pobj non,with
R2172 T2731 T2732 amod DNA-binding,partner
R2174 T2732 T2730 appos partner,non
R2175 T2733 T2732 punct ",",partner
R2176 T2734 T2732 appos CBFβ,partner
R2178 T2735 T2732 punct ",",partner
R2179 T2736 T2737 nsubj which,increases
R2180 T2737 T2732 relcl increases,partner
R2182 T2738 T2739 det the,affinity
R2183 T2739 T2737 dobj affinity,increases
R2184 T2740 T2739 prep for,affinity
R2189 T2741 T2740 pobj DNA,for
R2190 T2742 T2737 oprd binding,increases
R2191 T2743 T2737 cc and,increases
R2193 T2744 T2737 conj stabilizes,increases
R2194 T2745 T2746 det the,complex
R2195 T2746 T2744 dobj complex,stabilizes
R2197 T2747 T2744 prep by,stabilizes
R2198 T2748 T2747 pcomp preventing,by
R2200 T2749 T2750 amod ubiquitin-dependent,degradation
R2201 T2750 T2748 dobj degradation,preventing
R2203 T2751 T2754 punct (,al.
R2204 T2752 T2754 compound Wang,al.
R2205 T2753 T2754 nmod et,al.
R2207 T2754 T2748 advmod al.,preventing
R2208 T2755 T2754 punct ",",al.
R2209 T2756 T2754 npadvmod 1993,al.
R2210 T2757 T2754 punct ),al.
R2211 T2758 T2727 punct .,heterodimerize

GO-BP

Id Subject Object Predicate Lexical cue
T2991 155-186 http://purl.obolibrary.org/obo/GO_0006511 denotes ubiquitin-dependent degradation
T2992 175-186 http://purl.obolibrary.org/obo/GO_0009056 denotes degradation

GO-MF

Id Subject Object Predicate Lexical cue
T2999 46-53 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T3000 106-113 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T3005 102-113 http://purl.obolibrary.org/obo/GO_0003677 denotes DNA binding
T3006 155-164 http://purl.obolibrary.org/obo/GO_0031386 denotes ubiquitin

sentences

Id Subject Object Predicate Lexical cue
T1291 0-207 Sentence denotes RUNX proteins heterodimerize with the non–DNA-binding partner, CBFβ, which increases the affinity for DNA binding and stabilizes the complex by preventing ubiquitin-dependent degradation (Wang et al., 1993).
T30 0-207 Sentence denotes RUNX proteins heterodimerize with the non–DNA-binding partner, CBFβ, which increases the affinity for DNA binding and stabilizes the complex by preventing ubiquitin-dependent degradation (Wang et al., 1993).

events-check-again

Id Subject Object Predicate Lexical cue
T3265 14-28 Binding denotes heterodimerize
T3266 63-67 Protein denotes CBFβ
T3267 155-164 Protein denotes ubiquitin
R2582 T3266 T3265 themeOf CBFβ,heterodimerize

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T3100 0-13 Protein denotes RUNX proteins
T3101 63-67 Protein denotes CBFβ
T3102 155-164 Protein denotes ubiquitin
T3103 14-28 Binding denotes heterodimerize
T3104 175-186 Protein_catabolism denotes degradation
R2461 T3100 T3103 themeOf RUNX proteins,heterodimerize
R2462 T3101 T3103 themeOf CBFβ,heterodimerize
R2463 T3102 T3104 themeOf ubiquitin,degradation

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T1255 14-28 Binding denotes heterodimerize
T1256 63-67 Protein denotes CBFβ
T1257 155-164 Protein denotes ubiquitin
R865 T1256 T1255 themeOf CBFβ,heterodimerize

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T2077 0-4 Q13761 denotes RUNX
T2078 0-4 Q01196 denotes RUNX
T2079 0-4 Q13950 denotes RUNX
T2080 63-67 Q13951 denotes CBFβ

test2

Id Subject Object Predicate Lexical cue
T1166 14-28 Binding denotes heterodimerize
T1167 46-53 Binding denotes binding
T1168 63-67 Protein denotes CBFβ
T1169 106-113 Binding denotes binding
T1170 155-164 Protein denotes ubiquitin
T1171 175-186 Protein_catabolism denotes degradation
R813 T1168 T1169 themeOf CBFβ,binding
R814 T1168 T1166 themeOf CBFβ,heterodimerize
R815 T1168 T1167 themeOf CBFβ,binding