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PMC:2806624 / 41615-42888 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T20679 0-20 NN denotes Immunohistochemistry
T20680 22-27 JJ denotes Human
T20681 28-35 NN denotes tonsils
T20682 36-40 VB denotes were
T20683 41-49 VB denotes obtained
T20684 50-54 IN denotes from
T20685 55-68 NN denotes tonsillectomy
T20686 69-76 NN denotes samples
T20687 77-79 IN denotes of
T20688 80-92 JJ denotes hypertrophic
T20689 93-96 CC denotes and
T20690 97-108 JJ denotes obstructive
T20691 109-116 NN denotes tonsils
T20692 117-124 IN denotes without
T20693 125-126 DT denotes a
T20694 127-134 JJ denotes current
T20695 135-144 NN denotes infection
T20696 146-153 JJ denotes Ethical
T20697 154-164 NN denotes permission
T20698 165-168 VB denotes was
T20699 169-177 VB denotes obtained
T20700 178-182 IN denotes from
T20701 183-191 NNP denotes Cantonal
T20702 192-198 NNP denotes Ethics
T20703 199-209 NNP denotes Commission
T20704 209-210 -COMMA- denotes ,
T20705 211-214 CC denotes and
T20706 215-223 VB denotes informed
T20707 224-231 NN denotes consent
T20708 232-235 VB denotes was
T20709 236-244 VB denotes obtained
T20710 245-249 IN denotes from
T20711 250-258 NN denotes patients
T20712 260-282 JJ denotes Paraformaldehyde-fixed
T20713 283-289 NN denotes tonsil
T20714 290-302 NN denotes cryosections
T20715 303-307 VB denotes were
T20716 308-315 VB denotes stained
T20717 316-320 IN denotes with
T20718 321-333 JJ denotes unconjugated
T20719 334-340 NN denotes rabbit
T20720 341-344 NN denotes IgG
T20721 345-355 JJ denotes polyclonal
T20722 356-364 NN denotes antibody
T20723 365-367 TO denotes to
T20724 368-373 JJ denotes human
T20725 374-379 NN denotes RUNX1
T20726 380-381 -LRB- denotes (
T20727 381-386 NNP denotes Santa
T20728 387-391 NNP denotes Cruz
T20729 392-405 NNP denotes Biotechnology
T20730 405-406 -COMMA- denotes ,
T20731 407-411 NNP denotes Inc.
T20732 411-412 -RRB- denotes )
T20733 413-415 CC denotes or
T20734 416-428 JJ denotes unconjugated
T20735 429-434 NN denotes mouse
T20736 435-439 NN denotes IgG1
T20737 440-443 NN denotes mAb
T20738 444-446 TO denotes to
T20739 447-452 JJ denotes human
T20740 453-458 NN denotes RUNX3
T20741 459-460 -LRB- denotes (
T20742 460-465 NN denotes Abcam
T20743 465-466 -RRB- denotes )
T20744 468-473 IN denotes After
T20745 474-475 DT denotes a
T20746 476-483 VB denotes washing
T20747 484-488 NN denotes step
T20748 488-489 -COMMA- denotes ,
T20749 490-493 DT denotes the
T20750 494-502 NN denotes sections
T20751 503-507 VB denotes were
T20752 508-515 VB denotes stained
T20753 516-520 IN denotes with
T20754 521-524 DT denotes the
T20755 525-538 VB denotes corresponding
T20756 539-548 JJ denotes secondary
T20757 549-559 NN denotes antibodies
T20758 561-574 JJ denotes RUNX1-binding
T20759 575-585 NN denotes antibodies
T20760 586-590 VB denotes were
T20761 591-599 VB denotes detected
T20762 600-602 IN denotes by
T20763 603-608 VB denotes using
T20764 609-614 NNP denotes Alexa
T20765 615-620 NNP denotes Fluor
T20766 621-635 VB denotes 633–conjugated
T20767 636-640 NN denotes goat
T20768 641-652 NN denotes anti–rabbit
T20769 653-656 NN denotes IgG
T20770 657-660 CC denotes and
T20771 661-674 JJ denotes RUNX3-binding
T20772 675-685 NN denotes antibodies
T20773 686-690 VB denotes were
T20774 691-699 VB denotes detected
T20775 700-702 IN denotes by
T20776 703-708 VB denotes using
T20777 709-714 NNP denotes Alexa
T20778 715-720 NNP denotes Fluor
T20779 721-735 VB denotes 532–conjugated
T20780 736-740 NN denotes goat
T20781 741-751 NN denotes anti–mouse
T20782 752-756 NN denotes IgG1
T20783 758-767 RB denotes Afterward
T20784 767-768 -COMMA- denotes ,
T20785 769-772 DT denotes the
T20786 773-781 NN denotes sections
T20787 782-786 VB denotes were
T20788 787-793 VB denotes washed
T20789 794-797 CC denotes and
T20790 798-800 IN denotes in
T20791 801-804 DT denotes the
T20792 805-809 NN denotes case
T20793 810-812 IN denotes of
T20794 813-818 NN denotes RUNX3
T20795 819-827 VB denotes staining
T20796 828-829 DT denotes a
T20797 830-838 VB denotes blocking
T20798 839-843 NN denotes step
T20799 844-848 IN denotes with
T20800 849-851 DT denotes an
T20801 852-864 JJ denotes unconjugated
T20802 865-870 NN denotes mouse
T20803 871-875 NN denotes IgG1
T20804 876-879 NN denotes mAb
T20805 880-883 VB denotes was
T20806 884-888 VB denotes used
T20807 890-897 RB denotes Finally
T20808 897-898 -COMMA- denotes ,
T20809 899-902 DT denotes the
T20810 903-911 NN denotes sections
T20811 912-916 VB denotes were
T20812 917-924 VB denotes stained
T20813 925-929 IN denotes with
T20814 930-935 NNP denotes Alexa
T20815 936-941 NNP denotes Fluor
T20816 942-956 VB denotes 488–conjugated
T20817 957-962 NN denotes mouse
T20818 963-967 NN denotes IgG1
T20819 968-971 NN denotes mAb
T20820 972-974 TO denotes to
T20821 975-980 JJ denotes human
T20822 981-986 NN denotes FOXP3
T20823 987-988 -LRB- denotes (
T20824 988-999 NN denotes eBioscience
T20825 999-1000 -RRB- denotes )
T20826 1001-1003 CC denotes or
T20827 1004-1007 DT denotes the
T20828 1008-1021 VB denotes corresponding
T20829 1022-1029 NN denotes isotype
T20830 1030-1037 NN denotes control
T20831 1039-1045 NN denotes Tissue
T20832 1046-1054 NN denotes sections
T20833 1055-1059 VB denotes were
T20834 1060-1067 VB denotes stained
T20835 1068-1072 IN denotes with
T20836 1073-1077 NNP denotes DAPI
T20837 1078-1081 IN denotes for
T20838 1082-1085 DT denotes the
T20839 1086-1099 NN denotes demonstration
T20840 1100-1102 IN denotes of
T20841 1103-1109 NN denotes nuclei
T20842 1110-1113 CC denotes and
T20843 1114-1121 VB denotes mounted
T20844 1122-1126 IN denotes with
T20845 1127-1134 NNP denotes Prolong
T20846 1135-1143 NN denotes antifade
T20847 1144-1145 -LRB- denotes (
T20848 1145-1155 NN denotes Invitrogen
T20849 1155-1156 -RRB- denotes )
T20850 1158-1164 NN denotes Images
T20851 1165-1169 VB denotes were
T20852 1170-1178 VB denotes acquired
T20853 1179-1182 CC denotes and
T20854 1183-1191 VB denotes analyzed
T20855 1192-1197 VB denotes using
T20856 1198-1201 DT denotes the
T20857 1202-1210 JJ denotes confocal
T20858 1211-1221 NN denotes microscope
T20859 1222-1225 NN denotes DMI
T20860 1226-1231 NN denotes 4000B
T20861 1232-1235 CC denotes and
T20862 1236-1239 DT denotes the
T20863 1240-1243 NN denotes TCS
T20864 1244-1247 NN denotes SPE
T20865 1248-1254 NN denotes system
T20866 1255-1256 -LRB- denotes (
T20867 1256-1260 DT denotes both
T20868 1261-1265 IN denotes from
T20869 1266-1271 NNP denotes Leica
T20870 1271-1272 -RRB- denotes )
R16011 T20681 T20680 arg1Of tonsils,Human
R16012 T20681 T20682 arg1Of tonsils,were
R16013 T20681 T20683 arg2Of tonsils,obtained
R16014 T20683 T20682 arg2Of obtained,were
R16015 T20683 T20684 arg1Of obtained,from
R16016 T20686 T20684 arg2Of samples,from
R16017 T20686 T20685 arg1Of samples,tonsillectomy
R16018 T20686 T20687 arg1Of samples,of
R16019 T20688 T20689 arg1Of hypertrophic,and
R16020 T20690 T20689 arg2Of obstructive,and
R16021 T20691 T20687 arg2Of tonsils,of
R16022 T20691 T20688 arg1Of tonsils,hypertrophic
R16023 T20691 T20690 arg1Of tonsils,obstructive
R16024 T20691 T20692 arg1Of tonsils,without
R16025 T20695 T20692 arg2Of infection,without
R16026 T20695 T20693 arg1Of infection,a
R16027 T20695 T20694 arg1Of infection,current
R16028 T20697 T20696 arg1Of permission,Ethical
R16029 T20697 T20698 arg1Of permission,was
R16030 T20697 T20699 arg2Of permission,obtained
R16031 T20699 T20698 arg2Of obtained,was
R16032 T20699 T20700 arg1Of obtained,from
R16033 T20699 T20705 arg1Of obtained,and
R16034 T20703 T20700 arg2Of Commission,from
R16035 T20703 T20701 arg1Of Commission,Cantonal
R16036 T20703 T20702 arg1Of Commission,Ethics
R16037 T20705 T20704 arg1Of and,","
R16038 T20707 T20706 arg2Of consent,informed
R16039 T20707 T20708 arg1Of consent,was
R16040 T20707 T20709 arg2Of consent,obtained
R16041 T20709 T20705 arg2Of obtained,and
R16042 T20709 T20708 arg2Of obtained,was
R16043 T20709 T20710 arg1Of obtained,from
R16044 T20711 T20710 arg2Of patients,from
R16045 T20714 T20712 arg1Of cryosections,Paraformaldehyde-fixed
R16046 T20714 T20713 arg1Of cryosections,tonsil
R16047 T20714 T20715 arg1Of cryosections,were
R16048 T20714 T20716 arg2Of cryosections,stained
R16049 T20716 T20715 arg2Of stained,were
R16050 T20716 T20717 arg1Of stained,with
R16051 T20722 T20717 arg2Of antibody,with
R16052 T20722 T20718 arg1Of antibody,unconjugated
R16053 T20722 T20719 arg1Of antibody,rabbit
R16054 T20722 T20720 arg1Of antibody,IgG
R16055 T20722 T20721 arg1Of antibody,polyclonal
R16056 T20722 T20723 arg1Of antibody,to
R16057 T20725 T20724 arg1Of RUNX1,human
R16058 T20725 T20726 arg1Of RUNX1,(
R16059 T20725 T20733 arg1Of RUNX1,or
R16060 T20729 T20726 arg2Of Biotechnology,(
R16061 T20729 T20727 arg1Of Biotechnology,Santa
R16062 T20729 T20728 arg1Of Biotechnology,Cruz
R16063 T20729 T20730 arg1Of Biotechnology,","
R16064 T20731 T20730 arg2Of Inc.,","
R16065 T20732 T20726 arg3Of ),(
R16066 T20733 T20723 arg2Of or,to
R16067 T20737 T20733 arg2Of mAb,or
R16068 T20737 T20734 arg1Of mAb,unconjugated
R16069 T20737 T20735 arg1Of mAb,mouse
R16070 T20737 T20736 arg1Of mAb,IgG1
R16071 T20737 T20738 arg1Of mAb,to
R16072 T20740 T20738 arg2Of RUNX3,to
R16073 T20740 T20739 arg1Of RUNX3,human
R16074 T20740 T20741 arg1Of RUNX3,(
R16075 T20742 T20741 arg2Of Abcam,(
R16076 T20743 T20741 arg3Of ),(
R16077 T20747 T20744 arg2Of step,After
R16078 T20747 T20745 arg1Of step,a
R16079 T20747 T20746 arg1Of step,washing
R16080 T20750 T20749 arg1Of sections,the
R16081 T20750 T20751 arg1Of sections,were
R16082 T20750 T20752 arg2Of sections,stained
R16083 T20752 T20744 arg1Of stained,After
R16084 T20752 T20748 arg1Of stained,","
R16085 T20752 T20751 arg2Of stained,were
R16086 T20752 T20753 arg1Of stained,with
R16087 T20757 T20753 arg2Of antibodies,with
R16088 T20757 T20754 arg1Of antibodies,the
R16089 T20757 T20755 arg1Of antibodies,corresponding
R16090 T20757 T20756 arg1Of antibodies,secondary
R16091 T20759 T20758 arg1Of antibodies,RUNX1-binding
R16092 T20759 T20760 arg1Of antibodies,were
R16093 T20759 T20761 arg2Of antibodies,detected
R16094 T20761 T20760 arg2Of detected,were
R16095 T20761 T20762 arg1Of detected,by
R16096 T20761 T20770 arg1Of detected,and
R16097 T20763 T20762 arg2Of using,by
R16098 T20765 T20763 arg2Of Fluor,using
R16099 T20765 T20764 arg1Of Fluor,Alexa
R16100 T20769 T20763 arg3Of IgG,using
R16101 T20769 T20766 arg2Of IgG,633–conjugated
R16102 T20769 T20767 arg1Of IgG,goat
R16103 T20769 T20768 arg1Of IgG,anti–rabbit
R16104 T20772 T20771 arg1Of antibodies,RUNX3-binding
R16105 T20772 T20773 arg1Of antibodies,were
R16106 T20772 T20774 arg2Of antibodies,detected
R16107 T20774 T20770 arg2Of detected,and
R16108 T20774 T20773 arg2Of detected,were
R16109 T20774 T20775 arg1Of detected,by
R16110 T20776 T20775 arg2Of using,by
R16111 T20778 T20776 arg2Of Fluor,using
R16112 T20778 T20777 arg1Of Fluor,Alexa
R16113 T20782 T20776 arg3Of IgG1,using
R16114 T20782 T20779 arg2Of IgG1,532–conjugated
R16115 T20782 T20780 arg1Of IgG1,goat
R16116 T20782 T20781 arg1Of IgG1,anti–mouse
R16117 T20786 T20785 arg1Of sections,the
R16118 T20786 T20787 arg1Of sections,were
R16119 T20786 T20788 arg2Of sections,washed
R16120 T20788 T20783 arg1Of washed,Afterward
R16121 T20788 T20784 arg1Of washed,","
R16122 T20788 T20787 arg2Of washed,were
R16123 T20788 T20789 arg1Of washed,and
R16124 T20788 T20790 arg1Of washed,in
R16125 T20792 T20790 arg2Of case,in
R16126 T20792 T20791 arg1Of case,the
R16127 T20792 T20793 arg1Of case,of
R16128 T20794 T20793 arg2Of RUNX3,of
R16129 T20794 T20795 arg1Of RUNX3,staining
R16130 T20798 T20796 arg1Of step,a
R16131 T20798 T20797 arg1Of step,blocking
R16132 T20798 T20799 arg1Of step,with
R16133 T20798 T20805 arg1Of step,was
R16134 T20798 T20806 arg2Of step,used
R16135 T20804 T20799 arg2Of mAb,with
R16136 T20804 T20800 arg1Of mAb,an
R16137 T20804 T20801 arg1Of mAb,unconjugated
R16138 T20804 T20802 arg1Of mAb,mouse
R16139 T20804 T20803 arg1Of mAb,IgG1
R16140 T20806 T20795 arg2Of used,staining
R16141 T20806 T20805 arg2Of used,was
R16142 T20810 T20809 arg1Of sections,the
R16143 T20810 T20811 arg1Of sections,were
R16144 T20810 T20812 arg2Of sections,stained
R16145 T20812 T20807 arg1Of stained,Finally
R16146 T20812 T20808 arg1Of stained,","
R16147 T20812 T20811 arg2Of stained,were
R16148 T20812 T20813 arg1Of stained,with
R16149 T20815 T20813 arg2Of Fluor,with
R16150 T20815 T20814 arg1Of Fluor,Alexa
R16151 T20819 T20816 arg2Of mAb,488–conjugated
R16152 T20819 T20817 arg1Of mAb,mouse
R16153 T20819 T20818 arg1Of mAb,IgG1
R16154 T20819 T20820 arg1Of mAb,to
R16155 T20819 T20826 arg1Of mAb,or
R16156 T20822 T20820 arg2Of FOXP3,to
R16157 T20822 T20821 arg1Of FOXP3,human
R16158 T20822 T20823 arg1Of FOXP3,(
R16159 T20824 T20823 arg2Of eBioscience,(
R16160 T20825 T20823 arg3Of ),(
R16161 T20826 T20812 arg3Of or,stained
R16162 T20830 T20826 arg2Of control,or
R16163 T20830 T20827 arg1Of control,the
R16164 T20830 T20828 arg1Of control,corresponding
R16165 T20830 T20829 arg1Of control,isotype
R16166 T20832 T20831 arg1Of sections,Tissue
R16167 T20832 T20833 arg1Of sections,were
R16168 T20832 T20834 arg2Of sections,stained
R16169 T20832 T20843 arg1Of sections,mounted
R16170 T20834 T20833 arg2Of stained,were
R16171 T20834 T20835 arg1Of stained,with
R16172 T20834 T20837 arg1Of stained,for
R16173 T20834 T20842 arg1Of stained,and
R16174 T20836 T20835 arg2Of DAPI,with
R16175 T20839 T20837 arg2Of demonstration,for
R16176 T20839 T20838 arg1Of demonstration,the
R16177 T20839 T20840 arg1Of demonstration,of
R16178 T20841 T20840 arg2Of nuclei,of
R16179 T20843 T20842 arg2Of mounted,and
R16180 T20843 T20844 arg1Of mounted,with
R16181 T20846 T20844 arg2Of antifade,with
R16182 T20846 T20845 arg1Of antifade,Prolong
R16183 T20846 T20847 arg1Of antifade,(
R16184 T20848 T20847 arg2Of Invitrogen,(
R16185 T20849 T20847 arg3Of ),(
R16186 T20850 T20851 arg1Of Images,were
R16187 T20850 T20852 arg2Of Images,acquired
R16188 T20850 T20854 arg2Of Images,analyzed
R16189 T20852 T20853 arg1Of acquired,and
R16190 T20853 T20851 arg2Of and,were
R16191 T20854 T20853 arg2Of analyzed,and
R16192 T20855 T20854 arg3Of using,analyzed
R16193 T20860 T20856 arg1Of 4000B,the
R16194 T20860 T20857 arg1Of 4000B,confocal
R16195 T20860 T20858 arg1Of 4000B,microscope
R16196 T20860 T20859 arg1Of 4000B,DMI
R16197 T20860 T20861 arg1Of 4000B,and
R16198 T20861 T20855 arg2Of and,using
R16199 T20865 T20861 arg2Of system,and
R16200 T20865 T20862 arg1Of system,the
R16201 T20865 T20863 arg1Of system,TCS
R16202 T20865 T20864 arg1Of system,SPE
R16203 T20865 T20866 arg1Of system,(
R16204 T20867 T20866 arg2Of both,(
R16205 T20867 T20868 arg1Of both,from
R16206 T20869 T20868 arg2Of Leica,from
R16207 T20870 T20866 arg3Of ),(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T20887 0-20 NNP denotes Immunohistochemistry
T20888 20-21 . denotes .
T20889 22-27 JJ denotes Human
T20890 28-35 NNS denotes tonsils
T20891 36-40 VBD denotes were
T20892 41-49 VBN denotes obtained
T20893 50-54 IN denotes from
T20894 55-68 JJ denotes tonsillectomy
T20895 69-76 NNS denotes samples
T20896 77-79 IN denotes of
T20897 80-92 JJ denotes hypertrophic
T20898 93-96 CC denotes and
T20899 97-108 JJ denotes obstructive
T20900 109-116 NNS denotes tonsils
T20901 117-124 IN denotes without
T20902 125-126 DT denotes a
T20903 127-134 JJ denotes current
T20904 135-144 NN denotes infection
T20905 144-145 . denotes .
T20906 146-153 JJ denotes Ethical
T20907 154-164 NN denotes permission
T20908 165-168 VBD denotes was
T20909 169-177 VBN denotes obtained
T20910 178-182 IN denotes from
T20911 183-191 NNP denotes Cantonal
T20912 192-198 NNP denotes Ethics
T20913 199-209 NNP denotes Commission
T20914 209-210 , denotes ,
T20915 211-214 CC denotes and
T20916 215-223 VBN denotes informed
T20917 224-231 NN denotes consent
T20918 232-235 VBD denotes was
T20919 236-244 VBN denotes obtained
T20920 245-249 IN denotes from
T20921 250-258 NNS denotes patients
T20922 258-259 . denotes .
T20923 260-282 JJ denotes Paraformaldehyde-fixed
T20924 283-289 NN denotes tonsil
T20925 290-302 NNS denotes cryosections
T20926 303-307 VBD denotes were
T20927 308-315 VBN denotes stained
T20928 316-320 IN denotes with
T20929 321-333 JJ denotes unconjugated
T20930 334-340 NN denotes rabbit
T20931 341-344 NNP denotes IgG
T20932 345-355 JJ denotes polyclonal
T20933 356-364 NN denotes antibody
T20934 365-367 TO denotes to
T20935 368-373 JJ denotes human
T20936 374-379 NNP denotes RUNX1
T20937 380-381 -LRB- denotes (
T20938 381-386 NNP denotes Santa
T20939 387-391 NNP denotes Cruz
T20940 392-405 NNP denotes Biotechnology
T20941 405-406 , denotes ,
T20942 407-411 NNP denotes Inc.
T20943 411-412 -RRB- denotes )
T20944 413-415 CC denotes or
T20945 416-428 JJ denotes unconjugated
T20946 429-434 NN denotes mouse
T20947 435-439 NNP denotes IgG1
T20948 440-443 NNP denotes mAb
T20949 444-446 TO denotes to
T20950 447-452 JJ denotes human
T20951 453-458 NNP denotes RUNX3
T20952 459-460 -LRB- denotes (
T20953 460-465 NNP denotes Abcam
T20954 465-466 -RRB- denotes )
T20955 466-467 . denotes .
T20956 468-473 IN denotes After
T20957 474-475 DT denotes a
T20958 476-483 VBG denotes washing
T20959 484-488 NN denotes step
T20960 488-489 , denotes ,
T20961 490-493 DT denotes the
T20962 494-502 NNS denotes sections
T20963 503-507 VBD denotes were
T20964 508-515 VBN denotes stained
T20965 516-520 IN denotes with
T20966 521-524 DT denotes the
T20967 525-538 JJ denotes corresponding
T20968 539-548 JJ denotes secondary
T20969 549-559 NNS denotes antibodies
T20970 559-560 . denotes .
T20971 561-574 JJ denotes RUNX1-binding
T20972 575-585 NNS denotes antibodies
T20973 586-590 VBD denotes were
T20974 591-599 VBN denotes detected
T20975 600-602 IN denotes by
T20976 603-608 VBG denotes using
T20977 609-614 NNP denotes Alexa
T20978 615-620 NNP denotes Fluor
T20979 621-624 CD denotes 633
T20980 625-635 VBN denotes conjugated
T20981 636-640 NN denotes goat
T20982 641-645 NNS denotes anti
T20983 646-652 NN denotes rabbit
T20984 653-656 NNP denotes IgG
T20985 657-660 CC denotes and
T20986 661-674 JJ denotes RUNX3-binding
T20987 675-685 NNS denotes antibodies
T20988 686-690 VBD denotes were
T20989 691-699 VBN denotes detected
T20990 700-702 IN denotes by
T20991 703-708 VBG denotes using
T20992 709-714 NNP denotes Alexa
T20993 715-720 NNP denotes Fluor
T20994 721-724 CD denotes 532
T20995 725-735 VBN denotes conjugated
T20996 736-740 NN denotes goat
T20997 741-745 NNS denotes anti
T20998 746-751 NN denotes mouse
T20999 752-756 NNP denotes IgG1
T21000 756-757 . denotes .
T21001 758-767 RB denotes Afterward
T21002 767-768 , denotes ,
T21003 769-772 DT denotes the
T21004 773-781 NNS denotes sections
T21005 782-786 VBD denotes were
T21006 787-793 VBN denotes washed
T21007 794-797 CC denotes and
T21008 798-800 IN denotes in
T21009 801-804 DT denotes the
T21010 805-809 NN denotes case
T21011 810-812 IN denotes of
T21012 813-818 CD denotes RUNX3
T21013 819-827 VBG denotes staining
T21014 828-829 DT denotes a
T21015 830-838 VBG denotes blocking
T21016 839-843 NN denotes step
T21017 844-848 IN denotes with
T21018 849-851 DT denotes an
T21019 852-864 JJ denotes unconjugated
T21020 865-870 NN denotes mouse
T21021 871-875 NNP denotes IgG1
T21022 876-879 NNP denotes mAb
T21023 880-883 VBD denotes was
T21024 884-888 VBN denotes used
T21025 888-889 . denotes .
T21026 890-897 RB denotes Finally
T21027 897-898 , denotes ,
T21028 899-902 DT denotes the
T21029 903-911 NNS denotes sections
T21030 912-916 VBD denotes were
T21031 917-924 VBN denotes stained
T21032 925-929 IN denotes with
T21033 930-935 NNP denotes Alexa
T21034 936-941 NNP denotes Fluor
T21035 942-945 CD denotes 488
T21036 946-956 VBN denotes conjugated
T21037 957-962 NN denotes mouse
T21038 963-967 NNP denotes IgG1
T21039 968-971 NNP denotes mAb
T21040 972-974 TO denotes to
T21041 975-980 JJ denotes human
T21042 981-986 NNP denotes FOXP3
T21043 987-988 -LRB- denotes (
T21044 988-999 NNP denotes eBioscience
T21045 999-1000 -RRB- denotes )
T21046 1001-1003 CC denotes or
T21047 1004-1007 DT denotes the
T21048 1008-1021 JJ denotes corresponding
T21049 1022-1029 NN denotes isotype
T21050 1030-1037 NN denotes control
T21051 1037-1038 . denotes .
T21052 1039-1045 NN denotes Tissue
T21053 1046-1054 NNS denotes sections
T21054 1055-1059 VBD denotes were
T21055 1060-1067 VBN denotes stained
T21056 1068-1072 IN denotes with
T21057 1073-1077 NNP denotes DAPI
T21058 1078-1081 IN denotes for
T21059 1082-1085 DT denotes the
T21060 1086-1099 NN denotes demonstration
T21061 1100-1102 IN denotes of
T21062 1103-1109 NNS denotes nuclei
T21063 1110-1113 CC denotes and
T21064 1114-1121 VBN denotes mounted
T21065 1122-1126 IN denotes with
T21066 1127-1134 NNP denotes Prolong
T21067 1135-1143 NN denotes antifade
T21068 1144-1145 -LRB- denotes (
T21069 1145-1155 NNP denotes Invitrogen
T21070 1155-1156 -RRB- denotes )
T21071 1156-1157 . denotes .
T21072 1158-1164 NNS denotes Images
T21073 1165-1169 VBD denotes were
T21074 1170-1178 VBN denotes acquired
T21075 1179-1182 CC denotes and
T21076 1183-1191 VBN denotes analyzed
T21077 1192-1197 VBG denotes using
T21078 1198-1201 DT denotes the
T21079 1202-1210 JJ denotes confocal
T21080 1211-1221 NN denotes microscope
T21081 1222-1225 NNP denotes DMI
T21082 1226-1231 NNP denotes 4000B
T21083 1232-1235 CC denotes and
T21084 1236-1239 DT denotes the
T21085 1240-1243 NNP denotes TCS
T21086 1244-1247 NNP denotes SPE
T21087 1248-1254 NN denotes system
T21088 1255-1256 -LRB- denotes (
T21089 1256-1260 DT denotes both
T21090 1261-1265 IN denotes from
T21091 1266-1271 NNP denotes Leica
T21092 1271-1272 -RRB- denotes )
T21093 1272-1273 . denotes .
R16208 T20887 T20887 ROOT Immunohistochemistry,Immunohistochemistry
R16209 T20888 T20887 punct .,Immunohistochemistry
R16210 T20889 T20890 compound Human,tonsils
R16211 T20890 T20892 nsubjpass tonsils,obtained
R16212 T20891 T20892 auxpass were,obtained
R16213 T20892 T20892 ROOT obtained,obtained
R16214 T20893 T20892 prep from,obtained
R16215 T20894 T20895 amod tonsillectomy,samples
R16216 T20895 T20893 pobj samples,from
R16217 T20896 T20895 prep of,samples
R16218 T20897 T20900 amod hypertrophic,tonsils
R16219 T20898 T20897 cc and,hypertrophic
R16220 T20899 T20897 conj obstructive,hypertrophic
R16221 T20900 T20896 pobj tonsils,of
R16222 T20901 T20892 prep without,obtained
R16223 T20902 T20904 det a,infection
R16224 T20903 T20904 amod current,infection
R16225 T20904 T20901 pobj infection,without
R16226 T20905 T20892 punct .,obtained
R16227 T20906 T20907 amod Ethical,permission
R16228 T20907 T20909 nsubjpass permission,obtained
R16229 T20908 T20909 auxpass was,obtained
R16230 T20909 T20909 ROOT obtained,obtained
R16231 T20910 T20909 prep from,obtained
R16232 T20911 T20913 compound Cantonal,Commission
R16233 T20912 T20913 compound Ethics,Commission
R16234 T20913 T20910 pobj Commission,from
R16235 T20914 T20909 punct ",",obtained
R16236 T20915 T20909 cc and,obtained
R16237 T20916 T20917 amod informed,consent
R16238 T20917 T20919 nsubjpass consent,obtained
R16239 T20918 T20919 auxpass was,obtained
R16240 T20919 T20909 conj obtained,obtained
R16241 T20920 T20919 prep from,obtained
R16242 T20921 T20920 pobj patients,from
R16243 T20922 T20919 punct .,obtained
R16244 T20923 T20925 amod Paraformaldehyde-fixed,cryosections
R16245 T20924 T20925 compound tonsil,cryosections
R16246 T20925 T20927 nsubjpass cryosections,stained
R16247 T20926 T20927 auxpass were,stained
R16248 T20927 T20927 ROOT stained,stained
R16249 T20928 T20927 prep with,stained
R16250 T20929 T20930 amod unconjugated,rabbit
R16251 T20930 T20933 nmod rabbit,antibody
R16252 T20931 T20933 nmod IgG,antibody
R16253 T20932 T20933 amod polyclonal,antibody
R16254 T20933 T20928 pobj antibody,with
R16255 T20934 T20933 prep to,antibody
R16256 T20935 T20936 amod human,RUNX1
R16257 T20936 T20934 pobj RUNX1,to
R16258 T20937 T20940 punct (,Biotechnology
R16259 T20938 T20940 compound Santa,Biotechnology
R16260 T20939 T20940 compound Cruz,Biotechnology
R16261 T20940 T20936 appos Biotechnology,RUNX1
R16262 T20941 T20940 punct ",",Biotechnology
R16263 T20942 T20940 conj Inc.,Biotechnology
R16264 T20943 T20940 punct ),Biotechnology
R16265 T20944 T20936 cc or,RUNX1
R16266 T20945 T20946 amod unconjugated,mouse
R16267 T20946 T20948 compound mouse,mAb
R16268 T20947 T20948 compound IgG1,mAb
R16269 T20948 T20936 conj mAb,RUNX1
R16270 T20949 T20927 prep to,stained
R16271 T20950 T20951 amod human,RUNX3
R16272 T20951 T20949 pobj RUNX3,to
R16273 T20952 T20953 punct (,Abcam
R16274 T20953 T20951 appos Abcam,RUNX3
R16275 T20954 T20951 punct ),RUNX3
R16276 T20955 T20927 punct .,stained
R16277 T20956 T20964 prep After,stained
R16278 T20957 T20959 det a,step
R16279 T20958 T20959 amod washing,step
R16280 T20959 T20956 pobj step,After
R16281 T20960 T20964 punct ",",stained
R16282 T20961 T20962 det the,sections
R16283 T20962 T20964 nsubjpass sections,stained
R16284 T20963 T20964 auxpass were,stained
R16285 T20964 T20964 ROOT stained,stained
R16286 T20965 T20964 prep with,stained
R16287 T20966 T20969 det the,antibodies
R16288 T20967 T20969 amod corresponding,antibodies
R16289 T20968 T20969 amod secondary,antibodies
R16290 T20969 T20965 pobj antibodies,with
R16291 T20970 T20964 punct .,stained
R16292 T20971 T20972 amod RUNX1-binding,antibodies
R16293 T20972 T20974 nsubjpass antibodies,detected
R16294 T20973 T20974 auxpass were,detected
R16295 T20974 T20974 ROOT detected,detected
R16296 T20975 T20974 prep by,detected
R16297 T20976 T20975 pcomp using,by
R16298 T20977 T20978 compound Alexa,Fluor
R16299 T20978 T20976 dobj Fluor,using
R16300 T20979 T20978 nummod 633,Fluor
R16301 T20980 T20982 amod conjugated,anti
R16302 T20981 T20982 compound goat,anti
R16303 T20982 T20989 nsubjpass anti,detected
R16304 T20983 T20987 nmod rabbit,antibodies
R16305 T20984 T20987 nmod IgG,antibodies
R16306 T20985 T20984 cc and,IgG
R16307 T20986 T20984 conj RUNX3-binding,IgG
R16308 T20987 T20982 appos antibodies,anti
R16309 T20988 T20989 auxpass were,detected
R16310 T20989 T20989 ROOT detected,detected
R16311 T20990 T20989 prep by,detected
R16312 T20991 T20990 pcomp using,by
R16325 T21004 T21006 nsubjpass sections,washed
R16326 T21005 T21006 auxpass were,washed
R16327 T21006 T21006 ROOT washed,washed
R16328 T21007 T21006 cc and,washed
R16329 T21008 T21013 prep in,staining
R16330 T21009 T21010 det the,case
R16331 T21010 T21008 pobj case,in
R16332 T21011 T21010 prep of,case
R16333 T21012 T21013 meta RUNX3,staining
R16334 T21013 T21006 conj staining,washed
R16335 T21014 T21016 det a,step
R16336 T21015 T21016 amod blocking,step
R16337 T21016 T21013 dobj step,staining
R16338 T21017 T21016 prep with,step
R16339 T21018 T21020 det an,mouse
R16340 T21019 T21020 amod unconjugated,mouse
R16341 T21020 T21017 pobj mouse,with
R16342 T21021 T21022 compound IgG1,mAb
R16343 T21022 T21020 appos mAb,mouse
R16344 T21023 T21024 auxpass was,used
R16345 T21024 T21006 conj used,washed
R16346 T21025 T21006 punct .,washed
R16347 T21026 T21031 advmod Finally,stained
R16348 T21027 T21031 punct ",",stained
R16349 T21028 T21029 det the,sections
R16350 T21029 T21031 nsubjpass sections,stained
R16351 T21030 T21031 auxpass were,stained
R16352 T21031 T21031 ROOT stained,stained
R16353 T21032 T21031 prep with,stained
R16354 T21033 T21034 compound Alexa,Fluor
R16355 T21034 T21032 pobj Fluor,with
R16356 T21035 T21034 nummod 488,Fluor
R16357 T21036 T21037 compound conjugated,mouse
R16358 T21037 T21039 compound mouse,mAb
R16359 T21038 T21039 compound IgG1,mAb
R16360 T21039 T21031 dep mAb,stained
R16361 T21040 T21040 ROOT to,to
R16362 T21041 T21042 amod human,FOXP3
R16363 T21042 T21040 pobj FOXP3,to
R16364 T21043 T21044 punct (,eBioscience
R16365 T21044 T21042 appos eBioscience,FOXP3
R16366 T21045 T21044 punct ),eBioscience
R16367 T21046 T21042 cc or,FOXP3
R16368 T21047 T21050 det the,control
R16369 T21048 T21050 amod corresponding,control
R16370 T21049 T21050 compound isotype,control
R16371 T21050 T21042 conj control,FOXP3
R16372 T21051 T21040 punct .,to
R16373 T21052 T21053 compound Tissue,sections
R16374 T21053 T21055 nsubjpass sections,stained
R16375 T21054 T21055 auxpass were,stained
R16376 T21055 T21055 ROOT stained,stained
R16377 T21056 T21055 prep with,stained
R16378 T21057 T21056 pobj DAPI,with
R16379 T21058 T21055 prep for,stained
R16380 T21059 T21060 det the,demonstration
R16381 T21060 T21058 pobj demonstration,for
R16382 T21061 T21060 prep of,demonstration
R16383 T21062 T21061 pobj nuclei,of
R16384 T21063 T21055 cc and,stained
R16385 T21064 T21055 conj mounted,stained
R16386 T21065 T21064 prep with,mounted
R16387 T21066 T21067 compound Prolong,antifade
R16388 T21067 T21065 pobj antifade,with
R16389 T21068 T21069 punct (,Invitrogen
R16390 T21069 T21067 appos Invitrogen,antifade
R16391 T21070 T21069 punct ),Invitrogen
R16392 T21071 T21055 punct .,stained
R16393 T21072 T21074 nsubjpass Images,acquired
R16394 T21073 T21074 auxpass were,acquired
R16395 T21074 T21074 ROOT acquired,acquired
R16396 T21075 T21074 cc and,acquired
R16397 T21076 T21074 conj analyzed,acquired
R16398 T21077 T21076 advcl using,analyzed
R16399 T21078 T21080 det the,microscope
R16400 T21079 T21080 amod confocal,microscope
R16401 T21080 T21077 dobj microscope,using
R16402 T21081 T21082 compound DMI,4000B
R16403 T21082 T21080 appos 4000B,microscope
R16404 T21083 T21082 cc and,4000B
R16405 T21084 T21087 det the,system
R16406 T21085 T21087 compound TCS,system
R16407 T21086 T21087 compound SPE,system
R16408 T21087 T21082 conj system,4000B
R16409 T21088 T21087 punct (,system
R16410 T21089 T21087 appos both,system
R16411 T21090 T21089 prep from,both
R16412 T21091 T21090 pobj Leica,from
R16413 T21092 T21087 punct ),system
R16414 T21093 T21074 punct .,acquired
R16313 T20992 T20993 compound Alexa,Fluor
R16314 T20993 T20991 dobj Fluor,using
R16315 T20994 T20993 nummod 532,Fluor
R16316 T20995 T20997 amod conjugated,anti
R16317 T20996 T20997 compound goat,anti
R16318 T20997 T20989 advcl anti,detected
R16319 T20998 T20999 compound mouse,IgG1
R16320 T20999 T20997 appos IgG1,anti
R16321 T21000 T20989 punct .,detected
R16322 T21001 T21006 advmod Afterward,washed
R16323 T21002 T21006 punct ",",washed
R16324 T21003 T21004 det the,sections

UBERON-AE

Id Subject Object Predicate Lexical cue
T20658 28-35 http://purl.obolibrary.org/obo/UBERON_0002372 denotes tonsils
T20659 109-116 http://purl.obolibrary.org/obo/UBERON_0002372 denotes tonsils
T20660 283-289 http://purl.obolibrary.org/obo/UBERON_0002372 denotes tonsil

GO-MF

Id Subject Object Predicate Lexical cue
T21094 356-364 http://purl.obolibrary.org/obo/GO_0003823 denotes antibody
T21095 549-559 http://purl.obolibrary.org/obo/GO_0003823 denotes antibodies
T21096 575-585 http://purl.obolibrary.org/obo/GO_0003823 denotes antibodies
T21097 675-685 http://purl.obolibrary.org/obo/GO_0003823 denotes antibodies
T21098 567-574 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T21099 667-674 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

GO-CC

Id Subject Object Predicate Lexical cue
T21100 356-364 http://purl.obolibrary.org/obo/GO_0019815 denotes antibody
T21101 549-559 http://purl.obolibrary.org/obo/GO_0019815 denotes antibodies
T21102 575-585 http://purl.obolibrary.org/obo/GO_0019815 denotes antibodies
T21103 675-685 http://purl.obolibrary.org/obo/GO_0019815 denotes antibodies
T21104 356-364 http://purl.obolibrary.org/obo/GO_0042571 denotes antibody
T21105 549-559 http://purl.obolibrary.org/obo/GO_0042571 denotes antibodies
T21106 575-585 http://purl.obolibrary.org/obo/GO_0042571 denotes antibodies
T21107 675-685 http://purl.obolibrary.org/obo/GO_0042571 denotes antibodies
T21108 435-439 http://purl.obolibrary.org/obo/GO_0071735 denotes IgG1
T21109 752-756 http://purl.obolibrary.org/obo/GO_0071735 denotes IgG1
T21110 871-875 http://purl.obolibrary.org/obo/GO_0071735 denotes IgG1
T21111 963-967 http://purl.obolibrary.org/obo/GO_0071735 denotes IgG1

sentences

Id Subject Object Predicate Lexical cue
T20669 0-21 Sentence denotes Immunohistochemistry.
T20670 22-145 Sentence denotes Human tonsils were obtained from tonsillectomy samples of hypertrophic and obstructive tonsils without a current infection.
T20671 146-259 Sentence denotes Ethical permission was obtained from Cantonal Ethics Commission, and informed consent was obtained from patients.
T20672 260-467 Sentence denotes Paraformaldehyde-fixed tonsil cryosections were stained with unconjugated rabbit IgG polyclonal antibody to human RUNX1 (Santa Cruz Biotechnology, Inc.) or unconjugated mouse IgG1 mAb to human RUNX3 (Abcam).
T20673 468-560 Sentence denotes After a washing step, the sections were stained with the corresponding secondary antibodies.
T20674 561-757 Sentence denotes RUNX1-binding antibodies were detected by using Alexa Fluor 633–conjugated goat anti–rabbit IgG and RUNX3-binding antibodies were detected by using Alexa Fluor 532–conjugated goat anti–mouse IgG1.
T20675 758-889 Sentence denotes Afterward, the sections were washed and in the case of RUNX3 staining a blocking step with an unconjugated mouse IgG1 mAb was used.
T20676 890-1038 Sentence denotes Finally, the sections were stained with Alexa Fluor 488–conjugated mouse IgG1 mAb to human FOXP3 (eBioscience) or the corresponding isotype control.
T20677 1039-1157 Sentence denotes Tissue sections were stained with DAPI for the demonstration of nuclei and mounted with Prolong antifade (Invitrogen).
T20678 1158-1273 Sentence denotes Images were acquired and analyzed using the confocal microscope DMI 4000B and the TCS SPE system (both from Leica).
T284 0-21 Sentence denotes Immunohistochemistry.
T285 22-145 Sentence denotes Human tonsils were obtained from tonsillectomy samples of hypertrophic and obstructive tonsils without a current infection.
T286 146-259 Sentence denotes Ethical permission was obtained from Cantonal Ethics Commission, and informed consent was obtained from patients.
T287 260-467 Sentence denotes Paraformaldehyde-fixed tonsil cryosections were stained with unconjugated rabbit IgG polyclonal antibody to human RUNX1 (Santa Cruz Biotechnology, Inc.) or unconjugated mouse IgG1 mAb to human RUNX3 (Abcam).
T288 468-560 Sentence denotes After a washing step, the sections were stained with the corresponding secondary antibodies.
T289 561-757 Sentence denotes RUNX1-binding antibodies were detected by using Alexa Fluor 633–conjugated goat anti–rabbit IgG and RUNX3-binding antibodies were detected by using Alexa Fluor 532–conjugated goat anti–mouse IgG1.
T290 758-889 Sentence denotes Afterward, the sections were washed and in the case of RUNX3 staining a blocking step with an unconjugated mouse IgG1 mAb was used.
T291 890-1038 Sentence denotes Finally, the sections were stained with Alexa Fluor 488–conjugated mouse IgG1 mAb to human FOXP3 (eBioscience) or the corresponding isotype control.
T292 1039-1157 Sentence denotes Tissue sections were stained with DAPI for the demonstration of nuclei and mounted with Prolong antifade (Invitrogen).
T293 1158-1273 Sentence denotes Images were acquired and analyzed using the confocal microscope DMI 4000B and the TCS SPE system (both from Leica).

events-check-again

Id Subject Object Predicate Lexical cue
T21141 374-379 Protein denotes RUNX1
T21142 453-458 Protein denotes RUNX3
T21143 561-566 Protein denotes RUNX1
T21144 567-574 Binding denotes binding
T21145 661-666 Protein denotes RUNX3
T21146 667-674 Binding denotes binding
T21147 813-818 Protein denotes RUNX3
T21148 981-986 Protein denotes FOXP3
R16420 T21143 T21144 themeOf RUNX1,binding
R16421 T21145 T21146 themeOf RUNX3,binding

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T21120 334-364 Protein denotes rabbit IgG polyclonal antibody
T21121 429-443 Protein denotes mouse IgG1 mAb
T21122 561-585 Protein denotes RUNX1-binding antibodies
T21123 653-656 Protein denotes IgG
T21124 661-685 Protein denotes RUNX3-binding antibodies
T21125 752-756 Protein denotes IgG1
T21126 591-599 Gene_expression denotes detected
T21127 813-818 Protein denotes RUNX3
T21128 865-879 Protein denotes mouse IgG1 mAb
T21129 963-971 Protein denotes IgG1 mAb
T21130 981-986 Protein denotes FOXP3
T21131 1211-1231 Protein denotes microscope DMI 4000B
T21132 1240-1247 Protein denotes TCS SPE
R16417 T21122 T21126 themeOf RUNX1-binding antibodies,detected

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T20661 374-379 Protein denotes RUNX1
T20662 453-458 Protein denotes RUNX3
T20663 561-566 Protein denotes RUNX1
T20664 567-574 Binding denotes binding
T20665 661-666 Protein denotes RUNX3
T20666 667-674 Binding denotes binding
T20667 813-818 Protein denotes RUNX3
T20668 981-986 Protein denotes FOXP3
R16009 T20663 T20664 themeOf RUNX1,binding
R16010 T20665 T20666 themeOf RUNX3,binding

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T20871 374-379 Q01196 denotes RUNX1
T20872 453-458 Q13761 denotes RUNX3
T20873 561-566 Q01196 denotes RUNX1
T20874 661-666 Q13761 denotes RUNX3
T20875 813-818 Q13761 denotes RUNX3
T20876 981-986 Q9BZS1 denotes FOXP3

test2

Id Subject Object Predicate Lexical cue
T20650 374-379 Protein denotes RUNX1
T20651 453-458 Protein denotes RUNX3
T20652 561-566 Protein denotes RUNX1
T20653 567-574 Binding denotes binding
T20654 661-666 Protein denotes RUNX3
T20655 667-674 Binding denotes binding
T20656 813-818 Protein denotes RUNX3
T20657 981-986 Protein denotes FOXP3
R16007 T20652 T20653 themeOf RUNX1,binding
R16008 T20654 T20655 themeOf RUNX3,binding