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PMC:2806624 / 40529-40718 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T20007 0-4 JJ denotes CD4+
T20008 5-12 JJ denotes CD45RA+
T20009 13-25 RB denotes magnetically
T20010 26-32 VB denotes sorted
T20011 33-34 -LRB- denotes (
T20012 34-40 NN denotes CD45RO
T20013 41-50 NN denotes depletion
T20014 51-55 IN denotes with
T20015 56-64 NN denotes AutoMACS
T20016 64-65 -COLON- denotes ;
T20017 66-74 NNP denotes Miltenyi
T20018 75-81 NNP denotes Biotec
T20019 81-82 -RRB- denotes )
T20020 83-88 NN denotes cells
T20021 89-93 VB denotes were
T20022 94-104 VB denotes stimulated
T20023 105-109 IN denotes with
T20024 110-121 VB denotes immobilized
T20025 122-133 JJ denotes plate-bound
T20026 134-142 NN denotes anti-CD3
T20027 143-144 -LRB- denotes (
T20028 144-145 CD denotes 1
T20029 146-151 NN denotes µg/ml
T20030 151-152 -COLON- denotes ;
T20031 153-157 NN denotes OKT3
T20032 157-158 -COLON- denotes ;
T20033 159-163 NN denotes IgG1
T20034 163-164 -RRB- denotes )
T20035 165-168 CC denotes and
T20036 169-178 JJ denotes anti-CD28
T20037 179-180 -LRB- denotes (
T20038 180-181 CD denotes 2
T20039 182-187 NN denotes µg/ml
T20040 187-188 -RRB- denotes )
R15539 T20010 T20009 arg1Of sorted,magnetically
R15540 T20013 T20011 arg2Of depletion,(
R15541 T20013 T20012 arg1Of depletion,CD45RO
R15542 T20013 T20014 arg1Of depletion,with
R15543 T20013 T20016 arg1Of depletion,;
R15544 T20015 T20014 arg2Of AutoMACS,with
R15545 T20018 T20016 arg2Of Biotec,;
R15546 T20018 T20017 arg1Of Biotec,Miltenyi
R15547 T20019 T20011 arg3Of ),(
R15548 T20020 T20007 arg1Of cells,CD4+
R15549 T20020 T20008 arg1Of cells,CD45RA+
R15550 T20020 T20010 arg1Of cells,sorted
R15551 T20020 T20011 arg1Of cells,(
R15552 T20020 T20021 arg1Of cells,were
R15553 T20020 T20022 arg2Of cells,stimulated
R15554 T20022 T20021 arg2Of stimulated,were
R15555 T20022 T20023 arg1Of stimulated,with
R15556 T20026 T20024 arg2Of anti-CD3,immobilized
R15557 T20026 T20025 arg1Of anti-CD3,plate-bound
R15558 T20026 T20027 arg1Of anti-CD3,(
R15559 T20026 T20035 arg1Of anti-CD3,and
R15560 T20029 T20030 arg1Of µg/ml,;
R15561 T20030 T20027 arg2Of ;,(
R15562 T20030 T20028 arg1Of ;,1
R15563 T20030 T20032 arg1Of ;,;
R15564 T20031 T20030 arg2Of OKT3,;
R15565 T20033 T20032 arg2Of IgG1,;
R15566 T20034 T20027 arg3Of ),(
R15567 T20035 T20023 arg2Of and,with
R15568 T20036 T20035 arg2Of anti-CD28,and
R15569 T20036 T20037 arg1Of anti-CD28,(
R15570 T20039 T20037 arg2Of µg/ml,(
R15571 T20039 T20038 arg1Of µg/ml,2
R15572 T20040 T20037 arg3Of ),(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T20275 0-3 CD denotes CD4
T20276 3-4 CD denotes +
T20277 5-11 NNP denotes CD45RA
T20278 11-12 NN denotes +
T20279 13-25 RB denotes magnetically
T20280 26-32 VBN denotes sorted
T20281 33-34 -LRB- denotes (
T20282 34-40 CD denotes CD45RO
T20283 41-50 NN denotes depletion
T20284 51-55 IN denotes with
T20285 56-64 NNP denotes AutoMACS
T20286 64-65 : denotes ;
T20287 66-74 NNP denotes Miltenyi
T20288 75-81 NNP denotes Biotec
T20289 81-82 -RRB- denotes )
T20290 83-88 NNS denotes cells
T20291 89-93 VBD denotes were
T20292 94-104 VBN denotes stimulated
T20293 105-109 IN denotes with
T20294 110-121 JJ denotes immobilized
T20295 122-133 JJ denotes plate-bound
T20296 134-142 JJ denotes anti-CD3
T20297 143-144 -LRB- denotes (
T20298 144-145 CD denotes 1
T20299 146-148 NN denotes µg
T20300 148-149 NN denotes /
T20301 149-151 NN denotes ml
T20302 151-152 : denotes ;
T20303 153-157 CD denotes OKT3
T20304 157-158 : denotes ;
T20305 159-163 NNP denotes IgG1
T20306 163-164 -RRB- denotes )
T20307 165-168 CC denotes and
T20308 169-178 JJ denotes anti-CD28
T20309 179-180 -LRB- denotes (
T20310 180-181 CD denotes 2
T20311 182-184 NN denotes µg
T20312 184-185 NN denotes /
T20313 185-187 NN denotes ml
T20314 187-188 -RRB- denotes )
T20315 188-189 . denotes .
R15758 T20275 T20292 nsubjpass CD4,stimulated
R15759 T20276 T20280 nummod +,sorted
R15760 T20277 T20278 compound CD45RA,+
R15761 T20278 T20280 nsubj +,sorted
R15762 T20279 T20280 advmod magnetically,sorted
R15763 T20280 T20280 ROOT sorted,sorted
R15764 T20281 T20280 punct (,sorted
R15765 T20282 T20283 nummod CD45RO,depletion
R15766 T20283 T20280 dobj depletion,sorted
R15767 T20284 T20280 prep with,sorted
R15768 T20285 T20284 pobj AutoMACS,with
R15769 T20286 T20288 punct ;,Biotec
R15770 T20287 T20288 compound Miltenyi,Biotec
R15771 T20288 T20275 appos Biotec,CD4
R15772 T20289 T20288 punct ),Biotec
R15773 T20290 T20292 nsubjpass cells,stimulated
R15774 T20291 T20292 auxpass were,stimulated
R15775 T20292 T20292 ROOT stimulated,stimulated
R15776 T20293 T20292 prep with,stimulated
R15777 T20294 T20296 amod immobilized,anti-CD3
R15778 T20295 T20296 amod plate-bound,anti-CD3
R15779 T20296 T20293 pobj anti-CD3,with
R15780 T20297 T20301 punct (,ml
R15781 T20298 T20299 nummod 1,µg
R15782 T20299 T20301 nmod µg,ml
R15783 T20300 T20301 compound /,ml
R15784 T20301 T20296 appos ml,anti-CD3
R15785 T20302 T20305 punct ;,IgG1
R15786 T20303 T20305 nummod OKT3,IgG1
R15787 T20304 T20305 punct ;,IgG1
R15788 T20305 T20292 npadvmod IgG1,stimulated
R15789 T20306 T20305 punct ),IgG1
R15790 T20307 T20305 cc and,IgG1
R15791 T20308 T20305 conj anti-CD28,IgG1
R15792 T20309 T20313 punct (,ml
R15793 T20310 T20311 nummod 2,µg
R15794 T20311 T20313 nmod µg,ml
R15795 T20312 T20313 compound /,ml
R15796 T20313 T20308 appos ml,anti-CD28
R15797 T20314 T20313 punct ),ml
R15798 T20315 T20292 punct .,stimulated

GO-CC

Id Subject Object Predicate Lexical cue
T20546 159-163 http://purl.obolibrary.org/obo/GO_0071735 denotes IgG1

sentences

Id Subject Object Predicate Lexical cue
T19991 0-189 Sentence denotes CD4+ CD45RA+ magnetically sorted (CD45RO depletion with AutoMACS; Miltenyi Biotec) cells were stimulated with immobilized plate-bound anti-CD3 (1 µg/ml; OKT3; IgG1) and anti-CD28 (2 µg/ml).
T273 0-189 Sentence denotes CD4+ CD45RA+ magnetically sorted (CD45RO depletion with AutoMACS; Miltenyi Biotec) cells were stimulated with immobilized plate-bound anti-CD3 (1 µg/ml; OKT3; IgG1) and anti-CD28 (2 µg/ml).

events-check-again

Id Subject Object Predicate Lexical cue
T20614 0-3 Protein denotes CD4
T20615 5-11 Protein denotes CD45RA
T20616 34-40 Protein denotes CD45RO
T20617 41-50 Negative_regulation denotes depletion
T20618 139-142 Protein denotes CD3
T20619 174-178 Protein denotes CD28
R16004 T20616 T20617 themeOf CD45RO,depletion

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T20575 0-3 Protein denotes CD4
T20576 5-12 Protein denotes CD45RA+
T20577 34-40 Protein denotes CD45RO
T20578 153-157 Protein denotes OKT3
T20579 159-163 Protein denotes IgG1
T20580 41-50 Negative_regulation denotes depletion
R16002 T20577 T20580 themeOf CD45RO,depletion

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T19962 0-3 Protein denotes CD4
T19963 5-11 Protein denotes CD45RA
T19964 34-40 Protein denotes CD45RO
T19965 41-50 Negative_regulation denotes depletion
T19966 139-142 Protein denotes CD3
T19967 174-178 Protein denotes CD28
R15534 T19964 T19965 themeOf CD45RO,depletion

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T20224 0-3 P01730 denotes CD4
T20225 5-11 P08575 denotes CD45RA
T20226 34-40 P08575 denotes CD45RO
T20227 139-142 P09693 denotes CD3
T20228 139-142 P04234 denotes CD3
T20229 139-142 P20963 denotes CD3
T20230 139-142 P07766 denotes CD3
T20231 174-178 P10747 denotes CD28

test2

Id Subject Object Predicate Lexical cue
T19935 0-3 Protein denotes CD4
T19936 5-11 Protein denotes CD45RA
T19937 34-40 Protein denotes CD45RO
T19938 139-142 Protein denotes CD3
T19939 174-178 Protein denotes CD28