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PMC:2806624 / 36975-37180 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
19917773-18157133-59851538 105-109 18157133 denotes 2008

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T14963 0-2 PRP denotes It
T14964 3-6 VB denotes was
T14965 7-12 VB denotes shown
T14966 13-17 IN denotes that
T14967 18-22 NN denotes NFAT
T14968 23-26 CC denotes and
T14969 27-32 NN denotes Smad3
T14970 33-42 VB denotes cooperate
T14971 43-45 TO denotes to
T14972 46-52 VB denotes induce
T14973 53-58 NN denotes Foxp3
T14974 59-69 NN denotes expression
T14975 70-77 IN denotes through
T14976 78-81 PRP-DOLLAR- denotes its
T14977 82-90 NN denotes enhancer
T14978 91-92 -LRB- denotes (
T14979 92-96 NNP denotes Tone
T14980 97-99 FW denotes et
T14981 100-103 FW denotes al.
T14982 103-104 -COMMA- denotes ,
T14983 105-109 CD denotes 2008
T14984 109-110 -RRB- denotes )
T14985 110-111 -COMMA- denotes ,
T14986 112-115 CC denotes but
T14987 116-118 DT denotes no
T14988 119-124 NN denotes TGF-β
T14989 125-133 NN denotes response
T14990 134-141 NN denotes element
T14991 142-145 VB denotes was
T14992 146-156 VB denotes identified
T14993 157-159 IN denotes in
T14994 160-163 DT denotes the
T14995 164-169 NN denotes Foxp3
T14996 170-174 NN denotes gene
T14997 175-177 CC denotes or
T14998 178-180 IN denotes in
T14999 181-184 DT denotes the
T15000 185-196 VB denotes surrounding
T15001 197-204 NN denotes regions
R11757 T14963 T14964 arg1Of It,was
R11758 T14963 T14965 arg2Of It,shown
R11761 T14965 T14964 arg2Of shown,was
R11763 T14967 T14968 arg1Of NFAT,and
R11765 T14968 T14970 arg1Of and,cooperate
R11766 T14968 T14972 arg1Of and,induce
R11767 T14969 T14968 arg2Of Smad3,and
R11768 T14970 T14986 arg1Of cooperate,but
R11769 T14972 T14970 arg2Of induce,cooperate
R11770 T14972 T14971 arg1Of induce,to
R11771 T14972 T14975 arg1Of induce,through
R11772 T14972 T14978 arg1Of induce,(
R11773 T14974 T14972 arg2Of expression,induce
R11774 T14974 T14973 arg1Of expression,Foxp3
R11778 T14977 T14975 arg2Of enhancer,through
R11779 T14977 T14976 arg1Of enhancer,its
R11780 T14979 T14978 arg2Of Tone,(
R11781 T14979 T14980 arg1Of Tone,et
R11782 T14979 T14981 arg1Of Tone,al.
R11783 T14979 T14982 arg1Of Tone,","
R11786 T14983 T14982 arg2Of 2008,","
R11787 T14984 T14978 arg3Of ),(
R11788 T14986 T14965 arg3Of but,shown
R11789 T14986 T14966 arg1Of but,that
R11790 T14986 T14985 arg1Of but,","
R11792 T14990 T14987 arg1Of element,no
R11793 T14990 T14988 arg1Of element,TGF-β
R11794 T14990 T14989 arg1Of element,response
R11795 T14990 T14991 arg1Of element,was
R11798 T14990 T14992 arg2Of element,identified
R11800 T14992 T14986 arg2Of identified,but
R11801 T14992 T14991 arg2Of identified,was
R11802 T14992 T14993 arg1Of identified,in
R11803 T14992 T14998 arg1Of identified,in
R11804 T14993 T14997 arg1Of in,or
R11806 T14996 T14993 arg2Of gene,in
R11807 T14996 T14994 arg1Of gene,the
R11808 T14996 T14995 arg1Of gene,Foxp3
R11809 T14998 T14997 arg2Of in,or
R11810 T15001 T14998 arg2Of regions,in
R11811 T15001 T14999 arg1Of regions,the
R11812 T15001 T15000 arg1Of regions,surrounding

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T17323 0-2 PRP denotes It
T17324 3-6 VBD denotes was
T17325 7-12 VBN denotes shown
T17326 13-17 IN denotes that
T17327 18-22 NNP denotes NFAT
T17328 23-26 CC denotes and
T17329 27-32 NNP denotes Smad3
T17330 33-42 VBP denotes cooperate
T17331 43-45 TO denotes to
T17332 46-52 VB denotes induce
T17333 53-58 JJ denotes Foxp3
T17334 59-69 NN denotes expression
T17335 70-77 IN denotes through
T17336 78-81 PRP$ denotes its
T17337 82-90 NN denotes enhancer
T17338 91-92 -LRB- denotes (
T17339 92-96 NNP denotes Tone
T17340 97-99 FW denotes et
T17341 100-103 FW denotes al.
T17342 103-104 , denotes ,
T17343 105-109 CD denotes 2008
T17344 109-110 -RRB- denotes )
T17345 110-111 , denotes ,
T17346 112-115 CC denotes but
T17347 116-118 DT denotes no
T17348 119-124 JJ denotes TGF-β
T17349 125-133 NN denotes response
T17350 134-141 NN denotes element
T17351 142-145 VBD denotes was
T17352 146-156 VBN denotes identified
T17353 157-159 IN denotes in
T17354 160-163 DT denotes the
T17355 164-169 JJ denotes Foxp3
T17356 170-174 NN denotes gene
T17357 175-177 CC denotes or
T17358 178-180 IN denotes in
T17359 181-184 DT denotes the
T17360 185-196 VBG denotes surrounding
T17361 197-204 NNS denotes regions
T17362 204-205 . denotes .
R13789 T17347 T17350 det no,element
R13796 T17348 T17350 amod TGF-β,element
R13799 T17349 T17350 compound response,element
R13803 T17350 T17352 nsubjpass element,identified
R13808 T17351 T17352 auxpass was,identified
R13812 T17352 T17330 conj identified,cooperate
R13816 T17353 T17352 prep in,identified
R13822 T17354 T17356 det the,gene
R13823 T17355 T17356 amod Foxp3,gene
R13826 T17356 T17353 pobj gene,in
R13829 T17357 T17353 cc or,in
R13832 T17358 T17353 conj in,in
R13837 T17359 T17361 det the,regions
R13841 T17360 T17361 amod surrounding,regions
R13844 T17361 T17358 pobj regions,in
R13847 T17362 T17325 punct .,shown
R13848 T17323 T17325 nsubjpass It,shown
R13849 T17324 T17325 auxpass was,shown
R13850 T17325 T17325 ROOT shown,shown
R13852 T17326 T17330 mark that,cooperate
R13853 T17327 T17330 nsubj NFAT,cooperate
R13854 T17328 T17327 cc and,NFAT
R13856 T17329 T17327 conj Smad3,NFAT
R13857 T17330 T17325 ccomp cooperate,shown
R13859 T17331 T17332 aux to,induce
R13860 T17332 T17330 xcomp induce,cooperate
R13861 T17333 T17334 amod Foxp3,expression
R13863 T17334 T17332 dobj expression,induce
R13864 T17335 T17332 prep through,induce
R13865 T17336 T17337 poss its,enhancer
R13867 T17337 T17335 pobj enhancer,through
R13868 T17338 T17337 punct (,enhancer
R13869 T17339 T17341 compound Tone,al.
R13870 T17340 T17341 advmod et,al.
R13871 T17341 T17337 appos al.,enhancer
R13873 T17342 T17341 punct ",",al.
R13874 T17343 T17341 npadvmod 2008,al.
R13876 T17344 T17337 punct ),enhancer
R13877 T17345 T17330 punct ",",cooperate
R13879 T17346 T17330 cc but,cooperate

GO-BP

Id Subject Object Predicate Lexical cue
T17590 119-133 http://purl.obolibrary.org/obo/GO_0071559 denotes TGF-β response

sentences

Id Subject Object Predicate Lexical cue
T12910 0-205 Sentence denotes It was shown that NFAT and Smad3 cooperate to induce Foxp3 expression through its enhancer (Tone et al., 2008), but no TGF-β response element was identified in the Foxp3 gene or in the surrounding regions.
T247 0-205 Sentence denotes It was shown that NFAT and Smad3 cooperate to induce Foxp3 expression through its enhancer (Tone et al., 2008), but no TGF-β response element was identified in the Foxp3 gene or in the surrounding regions.

events-check-again

Id Subject Object Predicate Lexical cue
T18564 27-32 Protein denotes Smad3
T18565 46-52 Positive_regulation denotes induce
T18566 53-58 Protein denotes Foxp3
T18567 59-69 Gene_expression denotes expression
T18568 164-169 Protein denotes Foxp3
R14589 T18564 T18565 causeOf Smad3,induce
R14591 T18566 T18567 themeOf Foxp3,expression
R14592 T18567 T18565 themeOf expression,induce

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T12935 46-52 Positive_regulation denotes induce
T12936 59-69 Gene_expression denotes expression
T13109 27-32 Protein denotes Smad3
T13110 53-58 Protein denotes Foxp3
T13111 164-169 Protein denotes Foxp3
R9835 T12936 T12935 themeOf expression,induce
R9919 T13109 T12935 causeOf Smad3,induce
R9920 T13110 T12936 themeOf Foxp3,expression

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T15386 53-58 Q9BZS1 denotes Foxp3
T15387 119-124 P01137 denotes TGF-β
T15388 164-169 Q9BZS1 denotes Foxp3

test2

Id Subject Object Predicate Lexical cue
T12796 27-32 Protein denotes Smad3
T12797 46-52 Positive_regulation denotes induce
T12798 53-58 Protein denotes Foxp3
T12799 59-69 Gene_expression denotes expression
T12800 164-169 Protein denotes Foxp3
R9795 T12799 T12797 themeOf expression,induce
R9793 T12796 T12797 causeOf Smad3,induce
R9794 T12798 T12799 themeOf Foxp3,expression