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PMC:2806624 / 3611-3959 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1663 0-3 DT denotes The
T1664 4-11 JJ denotes crucial
T1665 12-16 NN denotes role
T1666 17-19 IN denotes of
T1667 20-25 NN denotes TGF-β
T1668 26-28 IN denotes in
T1669 29-34 PRP-DOLLAR- denotes their
T1670 35-45 NN denotes generation
T1671 46-49 VB denotes has
T1672 50-54 VB denotes been
T1673 55-72 NN denotes demonstrated. The
T1674 73-77 NN denotes RUNX
T1675 78-82 NN denotes gene
T1676 83-89 NN denotes family
T1677 90-91 -LRB- denotes (
T1678 91-103 JJ denotes Runt-related
T1679 104-117 NN denotes transcription
T1680 118-124 NN denotes factor
T1681 124-125 -COMMA- denotes ,
T1682 126-131 JJ denotes acute
T1683 132-139 JJ denotes myeloid
T1684 140-148 NN denotes leukemia
T1685 149-150 -LRB- denotes [
T1686 150-153 NN denotes AML
T1687 153-154 -RRB- denotes ]
T1688 154-155 -COMMA- denotes ,
T1689 156-168 JJ denotes core-binding
T1690 169-177 NN denotes factor-α
T1691 178-179 -LRB- denotes [
T1692 179-183 NNP denotes CBFα
T1693 183-184 -RRB- denotes ]
T1694 184-185 -COMMA- denotes ,
T1695 186-189 CC denotes and
T1696 190-197 NN denotes polyoma
T1697 198-214 JJ denotes enhancer-binding
T1698 215-225 NN denotes protein-2α
T1699 226-227 -LRB- denotes [
T1700 227-233 NN denotes PEBP2α
T1701 233-234 -RRB- denotes ]
T1702 234-235 -RRB- denotes )
T1703 236-244 VB denotes contains
T1704 245-250 CD denotes three
T1705 251-258 NN denotes members
T1706 258-259 -COMMA- denotes ,
T1707 260-265 NN denotes RUNX1
T1708 266-267 -LRB- denotes (
T1709 267-285 NN denotes AML1/CBFA2/PEBP2αB
T1710 285-286 -RRB- denotes )
T1711 286-287 -COMMA- denotes ,
T1712 288-293 NN denotes RUNX2
T1713 294-295 -LRB- denotes (
T1714 295-306 NN denotes AML3/CBFA1/
T1715 307-314 NN denotes PEBP2αA
T1716 314-315 -RRB- denotes )
T1717 315-316 -COMMA- denotes ,
T1718 317-320 CC denotes and
T1719 321-326 NN denotes RUNX3
T1720 327-328 -LRB- denotes (
T1721 328-346 NN denotes AML2/CBFA3/PEBP2αC
T1722 346-347 -RRB- denotes )
R1246 T1665 T1663 arg1Of role,The
R1247 T1665 T1664 arg1Of role,crucial
R1248 T1665 T1666 arg1Of role,of
R1249 T1665 T1668 arg1Of role,in
R1250 T1665 T1671 arg1Of role,has
R1251 T1665 T1672 arg1Of role,been
R1252 T1667 T1666 arg2Of TGF-β,of
R1253 T1670 T1668 arg2Of generation,in
R1254 T1670 T1669 arg1Of generation,their
R1255 T1672 T1671 arg2Of been,has
R1256 T1672 T1695 arg1Of been,and
R1257 T1680 T1673 arg1Of factor,"demonstrated. The"
R1258 T1680 T1674 arg1Of factor,RUNX
R1259 T1680 T1675 arg1Of factor,gene
R1260 T1680 T1676 arg1Of factor,family
R1261 T1680 T1677 arg1Of factor,(
R1262 T1680 T1678 arg1Of factor,Runt-related
R1263 T1680 T1679 arg1Of factor,transcription
R1264 T1680 T1681 arg1Of factor,","
R1265 T1681 T1688 arg1Of ",",","
R1266 T1684 T1681 arg2Of leukemia,","
R1267 T1684 T1682 arg1Of leukemia,acute
R1268 T1684 T1683 arg1Of leukemia,myeloid
R1269 T1684 T1685 arg1Of leukemia,[
R1270 T1686 T1685 arg2Of AML,[
R1271 T1687 T1685 arg3Of ],[
R1272 T1688 T1672 arg2Of ",",been
R1273 T1690 T1688 arg2Of factor-α,","
R1274 T1690 T1689 arg1Of factor-α,core-binding
R1275 T1690 T1691 arg1Of factor-α,[
R1276 T1692 T1691 arg2Of CBFα,[
R1277 T1693 T1691 arg3Of ],[
R1278 T1695 T1694 arg1Of and,","
R1279 T1698 T1696 arg1Of protein-2α,polyoma
R1280 T1698 T1697 arg1Of protein-2α,enhancer-binding
R1281 T1698 T1699 arg1Of protein-2α,[
R1282 T1698 T1702 arg1Of protein-2α,)
R1283 T1698 T1703 arg1Of protein-2α,contains
R1284 T1700 T1699 arg2Of PEBP2α,[
R1285 T1701 T1699 arg3Of ],[
R1286 T1703 T1695 arg2Of contains,and
R1287 T1705 T1703 arg2Of members,contains
R1288 T1705 T1704 arg1Of members,three
R1289 T1705 T1706 arg1Of members,","
R1290 T1707 T1708 arg1Of RUNX1,(
R1291 T1707 T1711 arg1Of RUNX1,","
R1292 T1709 T1708 arg2Of AML1/CBFA2/PEBP2αB,(
R1293 T1710 T1708 arg3Of ),(
R1294 T1711 T1718 arg1Of ",",and
R1295 T1712 T1711 arg2Of RUNX2,","
R1296 T1712 T1713 arg1Of RUNX2,(
R1297 T1715 T1713 arg2Of PEBP2αA,(
R1298 T1715 T1714 arg1Of PEBP2αA,AML3/CBFA1/
R1299 T1716 T1713 arg3Of ),(
R1300 T1718 T1706 arg2Of and,","
R1301 T1718 T1717 arg1Of and,","
R1302 T1719 T1718 arg2Of RUNX3,and
R1303 T1719 T1720 arg1Of RUNX3,(
R1304 T1721 T1720 arg2Of AML2/CBFA3/PEBP2αC,(
R1305 T1722 T1720 arg3Of ),(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2497 0-3 DT denotes The
T2498 4-11 JJ denotes crucial
T2499 12-16 NN denotes role
T2500 17-19 IN denotes of
T2501 20-25 NNP denotes TGF-β
T2502 26-28 IN denotes in
T2503 29-34 PRP$ denotes their
T2504 35-45 NN denotes generation
T2505 46-49 VBZ denotes has
T2506 50-54 VBN denotes been
T2507 55-72 JJ denotes demonstrated. The
T2508 73-77 NNP denotes RUNX
T2509 78-82 NN denotes gene
T2510 83-89 NN denotes family
T2511 90-91 -LRB- denotes (
T2512 91-103 JJ denotes Runt-related
T2513 104-117 NN denotes transcription
T2514 118-124 NN denotes factor
T2515 124-125 , denotes ,
T2516 126-131 JJ denotes acute
T2517 132-139 JJ denotes myeloid
T2518 140-148 NN denotes leukemia
T2519 149-150 NNP denotes [
T2520 150-153 NNP denotes AML
T2521 153-154 NNP denotes ]
T2522 154-155 , denotes ,
T2523 156-168 JJ denotes core-binding
T2524 169-177 JJ denotes factor-α
T2525 178-179 NNP denotes [
T2526 179-183 NNP denotes CBFα
T2527 183-184 NNP denotes ]
T2528 184-185 , denotes ,
T2529 186-189 CC denotes and
T2530 190-197 NN denotes polyoma
T2531 198-214 JJ denotes enhancer-binding
T2532 215-225 JJ denotes protein-2α
T2533 226-227 NNP denotes [
T2534 227-233 NNP denotes PEBP2α
T2535 233-234 NNP denotes ]
T2536 234-235 -RRB- denotes )
T2537 236-244 VBZ denotes contains
T2538 245-250 CD denotes three
T2539 251-258 NNS denotes members
T2540 258-259 , denotes ,
T2541 260-265 NNP denotes RUNX1
T2542 266-267 -LRB- denotes (
T2543 267-283 NNP denotes AML1/CBFA2/PEBP2
T2544 283-285 NNP denotes αB
T2545 285-286 -RRB- denotes )
T2546 286-287 , denotes ,
T2547 288-293 NNP denotes RUNX2
T2548 294-295 -LRB- denotes (
T2549 295-305 NNP denotes AML3/CBFA1
T2550 305-306 NNP denotes /
T2551 307-314 NNP denotes PEBP2αA
T2552 314-315 -RRB- denotes )
T2553 315-316 , denotes ,
T2554 317-320 CC denotes and
T2555 321-326 NNP denotes RUNX3
T2556 327-328 -LRB- denotes (
T2557 328-344 NNP denotes AML2/CBFA3/PEBP2
T2558 344-346 NNP denotes αC
T2559 346-347 -RRB- denotes )
T2560 347-348 . denotes .
R1987 T2497 T2499 det The,role
R1989 T2498 T2499 amod crucial,role
R1990 T2499 T2506 nsubj role,been
R1992 T2500 T2499 prep of,role
R1993 T2501 T2500 pobj TGF-β,of
R1995 T2502 T2499 prep in,role
R1996 T2503 T2504 poss their,generation
R1997 T2504 T2502 pobj generation,in
R1998 T2505 T2506 aux has,been
R1999 T2506 T2506 ROOT been,been
R2001 T2507 T2510 amod "demonstrated. The",family
R2002 T2508 T2510 compound RUNX,family
R2003 T2509 T2510 compound gene,family
R2004 T2510 T2506 attr family,been
R2005 T2511 T2514 punct (,factor
R2007 T2512 T2514 amod Runt-related,factor
R2008 T2513 T2514 compound transcription,factor
R2009 T2514 T2537 nsubj factor,contains
R2010 T2515 T2514 punct ",",factor
R2011 T2516 T2518 amod acute,leukemia
R2012 T2517 T2518 amod myeloid,leukemia
R2013 T2518 T2521 compound leukemia,]
R2015 T2519 T2521 compound [,]
R2016 T2520 T2521 compound AML,]
R2017 T2521 T2514 appos ],factor
R2019 T2522 T2527 punct ",",]
R2020 T2523 T2527 amod core-binding,]
R2021 T2524 T2527 compound factor-α,]
R2022 T2525 T2527 compound [,]
R2024 T2526 T2527 compound CBFα,]
R2025 T2527 T2521 appos ],]
R2026 T2528 T2527 punct ",",]
R2028 T2529 T2527 cc and,]
R2029 T2530 T2537 nsubj polyoma,contains
R2030 T2531 T2537 advmod enhancer-binding,contains
R2032 T2532 T2537 nsubj protein-2α,contains
R2033 T2533 T2535 compound [,]
R2034 T2534 T2535 compound PEBP2α,]
R2036 T2535 T2532 appos ],protein-2α
R2037 T2536 T2532 punct ),protein-2α
R2038 T2537 T2506 conj contains,been
R2039 T2547 T2541 conj RUNX2,RUNX1
R2040 T2538 T2539 nummod three,members
R2041 T2539 T2537 dobj members,contains
R2042 T2540 T2539 punct ",",members
R2043 T2541 T2539 appos RUNX1,members
R2044 T2548 T2547 punct (,RUNX2
R2045 T2542 T2544 punct (,αB
R2046 T2543 T2544 compound AML1/CBFA2/PEBP2,αB
R2047 T2544 T2541 appos αB,RUNX1
R2048 T2549 T2551 compound AML3/CBFA1,PEBP2αA
R2049 T2545 T2544 punct ),αB
R2050 T2546 T2541 punct ",",RUNX1
R2051 T2550 T2551 compound /,PEBP2αA
R2052 T2551 T2547 appos PEBP2αA,RUNX2
R2053 T2552 T2547 punct ),RUNX2
R2054 T2553 T2541 punct ",",RUNX1
R2057 T2554 T2541 cc and,RUNX1
R2063 T2555 T2541 conj RUNX3,RUNX1
R2068 T2556 T2555 punct (,RUNX3
R2071 T2557 T2558 compound AML2/CBFA3/PEBP2,αC
R2075 T2558 T2555 appos αC,RUNX3
R2079 T2559 T2555 punct ),RUNX3
R2082 T2560 T2537 punct .,contains

GO-BP

Id Subject Object Predicate Lexical cue
T2973 104-117 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription

GO-MF

Id Subject Object Predicate Lexical cue
T2996 161-168 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T2997 207-214 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T3002 198-214 http://purl.obolibrary.org/obo/GO_0035326 denotes enhancer-binding
T3003 207-222 http://purl.obolibrary.org/obo/GO_0005515 denotes binding protein

GO-CC

Id Subject Object Predicate Lexical cue
T3017 156-160 http://purl.obolibrary.org/obo/GO_0019013 denotes core

sentences

Id Subject Object Predicate Lexical cue
T1285 0-348 Sentence denotes The crucial role of TGF-β in their generation has been demonstrated. The RUNX gene family (Runt-related transcription factor, acute myeloid leukemia [AML], core-binding factor-α [CBFα], and polyoma enhancer-binding protein-2α [PEBP2α]) contains three members, RUNX1 (AML1/CBFA2/PEBP2αB), RUNX2 (AML3/CBFA1/ PEBP2αA), and RUNX3 (AML2/CBFA3/PEBP2αC).
T21 0-68 Sentence denotes The crucial role of TGF-β in their generation has been demonstrated.
T22 69-348 Sentence denotes The RUNX gene family (Runt-related transcription factor, acute myeloid leukemia [AML], core-binding factor-α [CBFα], and polyoma enhancer-binding protein-2α [PEBP2α]) contains three members, RUNX1 (AML1/CBFA2/PEBP2αB), RUNX2 (AML3/CBFA1/ PEBP2αA), and RUNX3 (AML2/CBFA3/PEBP2αC).

events-check-again

Id Subject Object Predicate Lexical cue
T3245 20-25 Protein denotes TGF-β
T3246 73-77 Protein denotes RUNX
T3247 260-265 Protein denotes RUNX1
T3248 267-271 Protein denotes AML1
T3249 272-277 Protein denotes CBFA2
T3250 278-285 Protein denotes PEBP2αB
T3251 288-293 Protein denotes RUNX2
T3252 295-299 Protein denotes AML3
T3253 300-305 Protein denotes CBFA1
T3254 307-314 Protein denotes PEBP2αA
T3255 321-326 Protein denotes RUNX3
R2568 T3248 T3247 equivalentTo AML1,RUNX1
R2577 T3249 T3247 equivalentTo CBFA2,RUNX1
R2578 T3250 T3247 equivalentTo PEBP2αB,RUNX1
R2579 T3252 T3251 equivalentTo AML3,RUNX2
R2580 T3253 T3251 equivalentTo CBFA1,RUNX2
R2581 T3254 T3251 equivalentTo PEBP2αA,RUNX2

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T3073 20-25 Protein denotes TGF-β
T3074 169-177 Protein denotes factor-α
T3075 179-183 Protein denotes CBFα
T3076 190-225 Protein denotes polyoma enhancer-binding protein-2α
T3077 260-265 Protein denotes RUNX1
T3078 267-271 Protein denotes AML1
T3079 272-277 Protein denotes CBFA2
T3080 278-285 Protein denotes PEBP2αB
T3081 288-293 Protein denotes RUNX2
T3082 295-299 Protein denotes AML3
T3083 300-305 Protein denotes CBFA1
T3084 307-314 Protein denotes PEBP2αA
T3085 321-326 Protein denotes RUNX3
T3086 328-332 Protein denotes AML2
T3087 333-338 Protein denotes CBFA3
T3088 339-346 Protein denotes PEBP2αC
T3089 226-233 Entity denotes [PEBP2α
R2451 T3076 T3089 partOf polyoma enhancer-binding protein-2α,[PEBP2α

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T1236 73-77 Protein denotes RUNX
T1237 260-265 Protein denotes RUNX1
T1238 267-271 Protein denotes AML1
T1239 272-277 Protein denotes CBFA2
T1240 278-285 Protein denotes PEBP2αB
T1241 288-293 Protein denotes RUNX2
T1242 295-299 Protein denotes AML3
T1243 300-305 Protein denotes CBFA1
T1244 307-314 Protein denotes PEBP2αA
T1245 321-326 Protein denotes RUNX3
T1235 20-25 Protein denotes TGF-β
R863 T1243 T1241 equivalentTo CBFA1,RUNX2
R862 T1242 T1241 equivalentTo AML3,RUNX2
R864 T1244 T1241 equivalentTo PEBP2αA,RUNX2
R859 T1238 T1237 equivalentTo AML1,RUNX1
R860 T1239 T1237 equivalentTo CBFA2,RUNX1
R861 T1240 T1237 equivalentTo PEBP2αB,RUNX1

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T2053 20-25 P01137 denotes TGF-β
T2054 73-77 Q13761 denotes RUNX
T2055 73-77 Q13950 denotes RUNX
T2056 73-77 Q01196 denotes RUNX
T2057 91-124 Q13761 denotes Runt-related transcription factor
T2058 91-124 Q13950 denotes Runt-related transcription factor
T2059 91-124 Q01196 denotes Runt-related transcription factor
T2060 260-265 Q01196 denotes RUNX1
T2061 267-271 Q01196 denotes AML1
T2062 272-277 Q01196 denotes CBFA2
T2063 288-293 Q13950 denotes RUNX2
T2064 295-299 Q13950 denotes AML3
T2065 300-305 Q13950 denotes CBFA1
T2066 321-326 Q13761 denotes RUNX3
T2067 328-332 Q13761 denotes AML2
T2068 333-338 Q13761 denotes CBFA3

test2

Id Subject Object Predicate Lexical cue
T1144 20-25 Protein denotes TGF-β
T1145 73-77 Protein denotes RUNX
T1146 260-265 Protein denotes RUNX1
T1147 267-271 Protein denotes AML1
T1148 272-277 Protein denotes CBFA2
T1149 278-285 Protein denotes PEBP2αB
T1150 288-293 Protein denotes RUNX2
T1151 295-299 Protein denotes AML3
T1152 300-305 Protein denotes CBFA1
T1153 307-314 Protein denotes PEBP2αA
T1154 321-326 Protein denotes RUNX3
R805 T1147 T1146 equivalentTo AML1,RUNX1
R806 T1148 T1146 equivalentTo CBFA2,RUNX1
R807 T1149 T1146 equivalentTo PEBP2αB,RUNX1
R808 T1151 T1150 equivalentTo AML3,RUNX2
R809 T1152 T1150 equivalentTo CBFA1,RUNX2
R810 T1153 T1150 equivalentTo PEBP2αA,RUNX2