PMC:2806624 / 353-474
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T270 | 0-12 | VB | denotes | transforming |
| T271 | 13-19 | NN | denotes | growth |
| T272 | 20-28 | NN | denotes | factor-β |
| T273 | 29-30 | -LRB- | denotes | ( |
| T274 | 30-35 | NN | denotes | TGF-β |
| T275 | 35-36 | -RRB- | denotes | ) |
| T276 | 37-44 | VB | denotes | induces |
| T277 | 45-48 | DT | denotes | the |
| T278 | 49-59 | NN | denotes | expression |
| T279 | 60-62 | IN | denotes | of |
| T280 | 63-66 | DT | denotes | the |
| T281 | 67-79 | JJ | denotes | Runt-related |
| T282 | 80-93 | NN | denotes | transcription |
| T283 | 94-101 | NN | denotes | factors |
| T284 | 102-107 | NN | denotes | RUNX1 |
| T285 | 108-111 | CC | denotes | and |
| T286 | 112-117 | NN | denotes | RUNX3 |
| T287 | 118-120 | IN | denotes | in |
| R127 | T272 | T270 | arg1Of | factor-β,transforming |
| R128 | T272 | T271 | arg1Of | factor-β,growth |
| R129 | T272 | T273 | arg1Of | factor-β,( |
| R130 | T272 | T276 | arg1Of | factor-β,induces |
| R131 | T274 | T273 | arg2Of | TGF-β,( |
| R132 | T275 | T273 | arg3Of | ),( |
| R135 | T278 | T276 | arg2Of | expression,induces |
| R136 | T278 | T277 | arg1Of | expression,the |
| R137 | T278 | T279 | arg1Of | expression,of |
| R138 | T278 | T287 | arg1Of | expression,in |
| R139 | T283 | T281 | arg1Of | factors,Runt-related |
| R140 | T283 | T282 | arg1Of | factors,transcription |
| R141 | T284 | T285 | arg1Of | RUNX1,and |
| R142 | T285 | T279 | arg2Of | and,of |
| R143 | T285 | T280 | arg1Of | and,the |
| R144 | T285 | T283 | arg1Of | and,factors |
| R145 | T286 | T285 | arg2Of | RUNX3,and |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T576 | 0-12 | VBG | denotes | transforming |
| T577 | 13-19 | NN | denotes | growth |
| T578 | 20-28 | NN | denotes | factor-β |
| T579 | 29-30 | -LRB- | denotes | ( |
| T580 | 30-35 | NNP | denotes | TGF-β |
| T581 | 35-36 | -RRB- | denotes | ) |
| T582 | 37-44 | VBZ | denotes | induces |
| T583 | 45-48 | DT | denotes | the |
| T584 | 49-59 | NN | denotes | expression |
| T585 | 60-62 | IN | denotes | of |
| T586 | 63-66 | DT | denotes | the |
| T587 | 67-79 | JJ | denotes | Runt-related |
| T588 | 80-93 | NN | denotes | transcription |
| T589 | 94-101 | NNS | denotes | factors |
| T590 | 102-107 | NNP | denotes | RUNX1 |
| T591 | 108-111 | CC | denotes | and |
| T592 | 112-117 | NNP | denotes | RUNX3 |
| T593 | 118-120 | IN | denotes | in |
| R371 | T576 | T578 | amod | transforming,factor-β |
| R372 | T577 | T578 | compound | growth,factor-β |
| R373 | T578 | T582 | nsubj | factor-β,induces |
| R374 | T579 | T580 | punct | (,TGF-β |
| R375 | T580 | T578 | appos | TGF-β,factor-β |
| R376 | T581 | T578 | punct | ),factor-β |
| R378 | T583 | T584 | det | the,expression |
| R379 | T584 | T582 | dobj | expression,induces |
| R380 | T585 | T584 | prep | of,expression |
| R381 | T586 | T589 | det | the,factors |
| R382 | T587 | T589 | amod | Runt-related,factors |
| R383 | T588 | T589 | compound | transcription,factors |
| R384 | T589 | T585 | pobj | factors,of |
| R386 | T591 | T590 | cc | and,RUNX1 |
| R387 | T592 | T590 | conj | RUNX3,RUNX1 |
| R388 | T593 | T590 | prep | in,RUNX1 |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T789 | 80-93 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcription |
| T792 | 13-19 | http://purl.obolibrary.org/obo/GO_0040007 | denotes | growth |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T868 | 13-28 | http://purl.obolibrary.org/obo/GO_0005160 | denotes | growth factor-β |
events-check-again
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T967 | 0-28 | Protein | denotes | transforming growth factor-β |
| T968 | 30-35 | Protein | denotes | TGF-β |
| T969 | 37-44 | Positive_regulation | denotes | induces |
| T970 | 37-44 | Positive_regulation | denotes | induces |
| T971 | 49-59 | Gene_expression | denotes | expression |
| T972 | 49-59 | Gene_expression | denotes | expression |
| T973 | 102-107 | Protein | denotes | RUNX1 |
| T974 | 112-117 | Protein | denotes | RUNX3 |
| R668 | T967 | T968 | equivalentTo | transforming growth factor-β,TGF-β |
| R669 | T968 | T969 | causeOf | TGF-β,induces |
| R670 | T968 | T970 | causeOf | TGF-β,induces |
| R671 | T971 | T969 | themeOf | expression,induces |
| R672 | T972 | T970 | themeOf | expression,induces |
| R673 | T973 | T971 | themeOf | RUNX1,expression |
| R674 | T974 | T972 | themeOf | RUNX3,expression |
bionlp-st-ge-2016-reference
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T148 | 37-44 | Positive_regulation | denotes | induces |
| T159 | 49-59 | Gene_expression | denotes | expression |
| T168 | 37-44 | Positive_regulation | denotes | induces |
| T169 | 49-59 | Gene_expression | denotes | expression |
| T176 | 102-107 | Protein | denotes | RUNX1 |
| T177 | 112-117 | Protein | denotes | RUNX3 |
| T219 | 0-28 | Protein | denotes | transforming growth factor-β |
| T220 | 30-35 | Protein | denotes | TGF-β |
| R57 | T159 | T148 | themeOf | expression,induces |
| R60 | T169 | T168 | themeOf | expression,induces |
| R64 | T176 | T159 | themeOf | RUNX1,expression |
| R65 | T177 | T169 | themeOf | RUNX3,expression |
| R79 | T219 | T220 | equivalentTo | transforming growth factor-β,TGF-β |
| R80 | T220 | T148 | causeOf | TGF-β,induces |
| R81 | T220 | T168 | causeOf | TGF-β,induces |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T467 | 0-28 | P01137 | denotes | transforming growth factor-β |
| T468 | 30-35 | P01137 | denotes | TGF-β |
| T469 | 67-101 | Q13761 | denotes | Runt-related transcription factors |
| T470 | 67-101 | Q01196 | denotes | Runt-related transcription factors |
| T471 | 67-101 | Q13950 | denotes | Runt-related transcription factors |
| T472 | 102-107 | Q01196 | denotes | RUNX1 |
| T473 | 112-117 | Q13761 | denotes | RUNX3 |
test2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T82 | 0-28 | Protein | denotes | transforming growth factor-β |
| T83 | 30-35 | Protein | denotes | TGF-β |
| T84 | 37-44 | Positive_regulation | denotes | induces |
| T85 | 49-59 | Gene_expression | denotes | expression |
| T86 | 102-107 | Protein | denotes | RUNX1 |
| T87 | 112-117 | Protein | denotes | RUNX3 |
| R710 | T82 | T83 | equivalentTo | transforming growth factor-β,TGF-β |
| R711 | T82 | T84 | causeOf | transforming growth factor-β,induces |
| R712 | T83 | T84 | causeOf | TGF-β,induces |
| R713 | T85 | T84 | themeOf | expression,induces |
| R714 | T86 | T85 | themeOf | RUNX1,expression |
| R715 | T87 | T85 | themeOf | RUNX3,expression |