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PMC:2806624 / 32675-32859 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
19917773-12402038-59851516 178-182 12402038 denotes 2002

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T14204 0-1 DT denotes A
T14205 2-10 NN denotes mutation
T14206 11-13 IN denotes in
T14207 14-17 DT denotes the
T14208 18-23 NN denotes RUNX1
T14209 24-31 NN denotes binding
T14210 32-36 NN denotes site
T14211 37-39 IN denotes in
T14212 40-43 DT denotes the
T14213 44-52 NN denotes promoter
T14214 53-55 IN denotes of
T14215 56-66 VB denotes programmed
T14216 67-71 NN denotes cell
T14217 72-77 NN denotes death
T14218 78-79 CD denotes 1
T14219 80-84 NN denotes gene
T14220 85-86 -LRB- denotes (
T14221 86-92 NN denotes PDCD-1
T14222 92-93 -RRB- denotes )
T14223 94-97 VB denotes has
T14224 98-102 VB denotes been
T14225 103-113 VB denotes implicated
T14226 114-116 IN denotes in
T14227 117-125 JJ denotes systemic
T14228 126-131 NN denotes lupus
T14229 132-145 NN denotes erythematosus
T14230 146-158 NN denotes pathogenesis
T14231 159-160 -LRB- denotes (
T14232 160-169 NNP denotes Prokunina
T14233 170-172 FW denotes et
T14234 173-176 FW denotes al.
T14235 176-177 -COMMA- denotes ,
T14236 178-182 CD denotes 2002
T14237 182-183 -RRB- denotes )
R11007 T14205 T14204 arg1Of mutation,A
R11008 T14205 T14206 arg1Of mutation,in
R11009 T14205 T14211 arg1Of mutation,in
R11010 T14205 T14223 arg1Of mutation,has
R11011 T14205 T14224 arg1Of mutation,been
R11012 T14205 T14225 arg2Of mutation,implicated
R11013 T14210 T14206 arg2Of site,in
R11014 T14210 T14207 arg1Of site,the
R11015 T14210 T14208 arg1Of site,RUNX1
R11016 T14210 T14209 arg1Of site,binding
R11017 T14213 T14211 arg2Of promoter,in
R11018 T14213 T14212 arg1Of promoter,the
R11019 T14213 T14214 arg1Of promoter,of
R11020 T14219 T14214 arg2Of gene,of
R11021 T14219 T14215 arg2Of gene,programmed
R11022 T14219 T14216 arg1Of gene,cell
R11023 T14219 T14217 arg1Of gene,death
R11024 T14219 T14218 arg1Of gene,1
R11025 T14219 T14220 arg1Of gene,(
R11026 T14221 T14220 arg2Of PDCD-1,(
R11027 T14222 T14220 arg3Of ),(
R11028 T14225 T14223 arg2Of implicated,has
R11029 T14225 T14224 arg2Of implicated,been
R11030 T14225 T14226 arg1Of implicated,in
R11031 T14225 T14231 arg1Of implicated,(
R11032 T14230 T14226 arg2Of pathogenesis,in
R11033 T14230 T14227 arg1Of pathogenesis,systemic
R11034 T14230 T14228 arg1Of pathogenesis,lupus
R11035 T14230 T14229 arg1Of pathogenesis,erythematosus
R11036 T14232 T14231 arg2Of Prokunina,(
R11037 T14232 T14233 arg1Of Prokunina,et
R11038 T14232 T14234 arg1Of Prokunina,al.
R11039 T14232 T14235 arg1Of Prokunina,","
R11040 T14236 T14235 arg2Of 2002,","
R11041 T14237 T14231 arg3Of ),(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T16528 0-1 DT denotes A
T16529 2-10 NN denotes mutation
T16530 11-13 IN denotes in
T16531 14-17 DT denotes the
T16532 18-23 NNP denotes RUNX1
T16533 24-31 JJ denotes binding
T16534 32-36 NN denotes site
T16535 37-39 IN denotes in
T16536 40-43 DT denotes the
T16537 44-52 NN denotes promoter
T16538 53-55 IN denotes of
T16539 56-66 JJ denotes programmed
T16540 67-71 NN denotes cell
T16541 72-77 NN denotes death
T16542 78-79 CD denotes 1
T16543 80-84 NN denotes gene
T16544 85-86 -LRB- denotes (
T16545 86-92 NN denotes PDCD-1
T16546 92-93 -RRB- denotes )
T16547 94-97 VBZ denotes has
T16548 98-102 VBN denotes been
T16549 103-113 VBN denotes implicated
T16550 114-116 IN denotes in
T16551 117-125 JJ denotes systemic
T16552 126-131 NN denotes lupus
T16553 132-145 VBZ denotes erythematosus
T16554 146-158 NN denotes pathogenesis
T16555 159-160 -LRB- denotes (
T16556 160-169 NNP denotes Prokunina
T16557 170-172 FW denotes et
T16558 173-176 FW denotes al.
T16559 176-177 , denotes ,
T16560 178-182 CD denotes 2002
T16561 182-183 -RRB- denotes )
T16562 183-184 . denotes .
R13009 T16528 T16529 det A,mutation
R13010 T16529 T16549 nsubjpass mutation,implicated
R13011 T16530 T16529 prep in,mutation
R13014 T16531 T16534 det the,site
R13016 T16532 T16534 nmod RUNX1,site
R13017 T16533 T16534 amod binding,site
R13018 T16534 T16530 pobj site,in
R13019 T16535 T16529 prep in,mutation
R13020 T16536 T16537 det the,promoter
R13022 T16537 T16535 pobj promoter,in
R13023 T16538 T16537 prep of,promoter
R13024 T16539 T16541 amod programmed,death
R13026 T16540 T16541 compound cell,death
R13027 T16541 T16538 pobj death,of
R13028 T16542 T16543 nummod 1,gene
R13030 T16543 T16549 nsubjpass gene,implicated
R13031 T16544 T16543 punct (,gene
R13032 T16545 T16543 appos PDCD-1,gene
R13034 T16546 T16543 punct ),gene
R13035 T16547 T16549 aux has,implicated
R13036 T16548 T16549 auxpass been,implicated
R13038 T16549 T16553 csubj implicated,erythematosus
R13039 T16550 T16549 prep in,implicated
R13040 T16551 T16552 amod systemic,lupus
R13042 T16552 T16550 pobj lupus,in
R13043 T16553 T16553 ROOT erythematosus,erythematosus
R13045 T16554 T16553 dobj pathogenesis,erythematosus
R13046 T16555 T16558 punct (,al.
R13049 T16556 T16558 compound Prokunina,al.
R13050 T16557 T16558 nmod et,al.
R13052 T16558 T16553 parataxis al.,erythematosus
R13053 T16559 T16558 punct ",",al.
R13054 T16560 T16558 npadvmod 2002,al.
R13056 T16561 T16558 punct ),al.
R13057 T16562 T16553 punct .,erythematosus

GO-BP

Id Subject Object Predicate Lexical cue
T17568 72-77 http://purl.obolibrary.org/obo/GO_0016265 denotes death
T17569 56-77 http://purl.obolibrary.org/obo/GO_0001781 denotes programmed cell death
T17570 56-77 http://purl.obolibrary.org/obo/GO_0006915 denotes programmed cell death
T17571 56-77 http://purl.obolibrary.org/obo/GO_0010623 denotes programmed cell death
T17572 56-77 http://purl.obolibrary.org/obo/GO_0034349 denotes programmed cell death
T17573 56-77 http://purl.obolibrary.org/obo/GO_0043067 denotes programmed cell death
T17574 56-77 http://purl.obolibrary.org/obo/GO_0048102 denotes programmed cell death
T17575 56-77 http://purl.obolibrary.org/obo/GO_0012502 denotes programmed cell death
T17576 56-77 http://purl.obolibrary.org/obo/GO_0043068 denotes programmed cell death
T17577 67-77 http://purl.obolibrary.org/obo/GO_0008219 denotes cell death
T17578 146-158 http://purl.obolibrary.org/obo/GO_0009405 denotes pathogenesis

GO-MF

Id Subject Object Predicate Lexical cue
T17678 24-31 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

sentences

Id Subject Object Predicate Lexical cue
T12885 0-184 Sentence denotes A mutation in the RUNX1 binding site in the promoter of programmed cell death 1 gene (PDCD-1) has been implicated in systemic lupus erythematosus pathogenesis (Prokunina et al., 2002).
T222 0-184 Sentence denotes A mutation in the RUNX1 binding site in the promoter of programmed cell death 1 gene (PDCD-1) has been implicated in systemic lupus erythematosus pathogenesis (Prokunina et al., 2002).

ICD10

Id Subject Object Predicate Lexical cue
T17658 117-145 http://purl.bioontology.org/ontology/ICD10/M32.9 denotes systemic lupus erythematosus
T17659 117-145 http://purl.bioontology.org/ontology/ICD10/M32 denotes systemic lupus erythematosus
T17660 126-145 http://purl.bioontology.org/ontology/ICD10/L93 denotes lupus erythematosus

events-check-again

Id Subject Object Predicate Lexical cue
T18452 56-79 Protein denotes programmed cell death 1
T18453 86-92 Protein denotes PDCD-1
R14522 T18453 T18452 equivalentTo PDCD-1,programmed cell death 1

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T13217 56-79 Protein denotes programmed cell death 1
T13218 86-92 Protein denotes PDCD-1
R10008 T13218 T13217 equivalentTo PDCD-1,programmed cell death 1

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T15316 18-23 Q01196 denotes RUNX1

test2

Id Subject Object Predicate Lexical cue
T12703 56-79 Protein denotes programmed cell death 1
T12704 86-92 Protein denotes PDCD-1
R9737 T12704 T12703 equivalentTo PDCD-1,programmed cell death 1