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PMC:2806624 / 321-534 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T262 0-2 IN denotes In
T263 3-7 DT denotes this
T264 8-13 NN denotes study
T265 13-14 -COMMA- denotes ,
T266 15-17 PRP denotes we
T267 18-22 VB denotes show
T268 23-27 IN denotes that
T269 28-31 DT denotes the
T270 32-44 VB denotes transforming
T271 45-51 NN denotes growth
T272 52-60 NN denotes factor-β
T273 61-62 -LRB- denotes (
T274 62-67 NN denotes TGF-β
T275 67-68 -RRB- denotes )
T276 69-76 VB denotes induces
T277 77-80 DT denotes the
T278 81-91 NN denotes expression
T279 92-94 IN denotes of
T280 95-98 DT denotes the
T281 99-111 JJ denotes Runt-related
T282 112-125 NN denotes transcription
T283 126-133 NN denotes factors
T284 134-139 NN denotes RUNX1
T285 140-143 CC denotes and
T286 144-149 NN denotes RUNX3
T287 150-152 IN denotes in
T288 153-157 JJ denotes CD4+
T289 158-159 NN denotes T
T290 160-165 NN denotes cells
T291 167-171 DT denotes This
T292 172-181 NN denotes induction
T293 182-187 VB denotes seems
T294 188-190 TO denotes to
T295 191-193 VB denotes be
T296 194-195 DT denotes a
T297 196-208 NN denotes prerequisite
T298 209-212 IN denotes for
R121 T264 T262 arg2Of study,In
R122 T264 T263 arg1Of study,this
R123 T266 T267 arg1Of we,show
R124 T267 T262 arg1Of show,In
R125 T267 T265 arg1Of show,","
R126 T272 T269 arg1Of factor-β,the
R127 T272 T270 arg1Of factor-β,transforming
R128 T272 T271 arg1Of factor-β,growth
R129 T272 T273 arg1Of factor-β,(
R130 T272 T276 arg1Of factor-β,induces
R131 T274 T273 arg2Of TGF-β,(
R132 T275 T273 arg3Of ),(
R133 T276 T267 arg2Of induces,show
R134 T276 T268 arg1Of induces,that
R135 T278 T276 arg2Of expression,induces
R136 T278 T277 arg1Of expression,the
R137 T278 T279 arg1Of expression,of
R138 T278 T287 arg1Of expression,in
R139 T283 T281 arg1Of factors,Runt-related
R140 T283 T282 arg1Of factors,transcription
R141 T284 T285 arg1Of RUNX1,and
R142 T285 T279 arg2Of and,of
R143 T285 T280 arg1Of and,the
R144 T285 T283 arg1Of and,factors
R145 T286 T285 arg2Of RUNX3,and
R146 T290 T287 arg2Of cells,in
R147 T290 T288 arg1Of cells,CD4+
R148 T290 T289 arg1Of cells,T
R149 T292 T291 arg1Of induction,This
R150 T292 T293 arg1Of induction,seems
R151 T292 T295 arg1Of induction,be
R152 T295 T293 arg2Of be,seems
R153 T295 T294 arg1Of be,to
R154 T297 T295 arg2Of prerequisite,be
R155 T297 T296 arg1Of prerequisite,a
R156 T297 T298 arg1Of prerequisite,for

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T568 0-2 IN denotes In
T569 3-7 DT denotes this
T570 8-13 NN denotes study
T571 13-14 , denotes ,
T572 15-17 PRP denotes we
T573 18-22 VBP denotes show
T574 23-27 IN denotes that
T575 28-31 DT denotes the
T576 32-44 VBG denotes transforming
T577 45-51 NN denotes growth
T578 52-60 NN denotes factor-β
T579 61-62 -LRB- denotes (
T580 62-67 NNP denotes TGF-β
T581 67-68 -RRB- denotes )
T582 69-76 VBZ denotes induces
T583 77-80 DT denotes the
T584 81-91 NN denotes expression
T585 92-94 IN denotes of
T586 95-98 DT denotes the
T587 99-111 JJ denotes Runt-related
T588 112-125 NN denotes transcription
T589 126-133 NNS denotes factors
T590 134-139 NNP denotes RUNX1
T591 140-143 CC denotes and
T592 144-149 NNP denotes RUNX3
T593 150-152 IN denotes in
T594 153-156 NNP denotes CD4
T595 156-157 NNP denotes +
T596 158-159 NNP denotes T
T597 160-165 NNS denotes cells
T598 165-166 . denotes .
T599 167-171 DT denotes This
T600 172-181 NN denotes induction
T601 182-187 VBZ denotes seems
T602 188-190 TO denotes to
T603 191-193 VB denotes be
T604 194-195 DT denotes a
T605 196-208 NN denotes prerequisite
T606 209-212 IN denotes for
R363 T568 T573 prep In,show
R364 T569 T570 det this,study
R365 T570 T568 pobj study,In
R366 T571 T573 punct ",",show
R367 T572 T573 nsubj we,show
R368 T573 T573 ROOT show,show
R369 T574 T582 mark that,induces
R370 T575 T578 det the,factor-β
R371 T576 T578 amod transforming,factor-β
R372 T577 T578 compound growth,factor-β
R373 T578 T582 nsubj factor-β,induces
R374 T579 T580 punct (,TGF-β
R375 T580 T578 appos TGF-β,factor-β
R376 T581 T578 punct ),factor-β
R377 T582 T573 ccomp induces,show
R378 T583 T584 det the,expression
R379 T584 T582 dobj expression,induces
R380 T585 T584 prep of,expression
R381 T586 T589 det the,factors
R382 T587 T589 amod Runt-related,factors
R383 T588 T589 compound transcription,factors
R384 T589 T585 pobj factors,of
R385 T590 T597 nmod RUNX1,cells
R386 T591 T590 cc and,RUNX1
R387 T592 T590 conj RUNX3,RUNX1
R388 T593 T590 prep in,RUNX1
R389 T594 T593 pobj CD4,in
R390 T595 T597 compound +,cells
R391 T596 T597 compound T,cells
R392 T597 T584 conj cells,expression
R393 T598 T573 punct .,show
R394 T599 T600 det This,induction
R395 T600 T601 nsubj induction,seems
R396 T601 T601 ROOT seems,seems
R397 T602 T603 aux to,be
R398 T603 T601 xcomp be,seems
R399 T604 T605 det a,prerequisite
R400 T605 T603 attr prerequisite,be
R401 T606 T605 prep for,prerequisite

GO-BP

Id Subject Object Predicate Lexical cue
T789 112-125 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T792 45-51 http://purl.obolibrary.org/obo/GO_0040007 denotes growth

GO-MF

Id Subject Object Predicate Lexical cue
T868 45-60 http://purl.obolibrary.org/obo/GO_0005160 denotes growth factor-β

GO-CC

Id Subject Object Predicate Lexical cue
T874 160-165 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T140 0-166 Sentence denotes In this study, we show that the transforming growth factor-β (TGF-β) induces the expression of the Runt-related transcription factors RUNX1 and RUNX3 in CD4+ T cells.
T4 0-166 Sentence denotes In this study, we show that the transforming growth factor-β (TGF-β) induces the expression of the Runt-related transcription factors RUNX1 and RUNX3 in CD4+ T cells.

events-check-again

Id Subject Object Predicate Lexical cue Speculation
T967 32-60 Protein denotes transforming growth factor-β
T968 62-67 Protein denotes TGF-β
T969 69-76 Positive_regulation denotes induces
T970 69-76 Positive_regulation denotes induces
T971 81-91 Gene_expression denotes expression
T972 81-91 Gene_expression denotes expression
T973 134-139 Protein denotes RUNX1
T974 144-149 Protein denotes RUNX3
T975 153-156 Protein denotes CD4
T976 196-208 Positive_regulation denotes prerequisite true
T977 196-208 Positive_regulation denotes prerequisite true
R668 T967 T968 equivalentTo transforming growth factor-β,TGF-β
R669 T968 T969 causeOf TGF-β,induces
R670 T968 T970 causeOf TGF-β,induces
R671 T971 T969 themeOf expression,induces
R672 T972 T970 themeOf expression,induces
R673 T973 T971 themeOf RUNX1,expression
R674 T974 T972 themeOf RUNX3,expression

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Speculation
T148 69-76 Positive_regulation denotes induces
T159 81-91 Gene_expression denotes expression
T168 69-76 Positive_regulation denotes induces
T169 81-91 Gene_expression denotes expression
T170 196-208 Positive_regulation denotes prerequisite true
T172 196-208 Positive_regulation denotes prerequisite true
T176 134-139 Protein denotes RUNX1
T177 144-149 Protein denotes RUNX3
T178 153-156 Protein denotes CD4
T219 32-60 Protein denotes transforming growth factor-β
T220 62-67 Protein denotes TGF-β
R57 T159 T148 themeOf expression,induces
R60 T169 T168 themeOf expression,induces
R64 T176 T159 themeOf RUNX1,expression
R65 T177 T169 themeOf RUNX3,expression
R79 T219 T220 equivalentTo transforming growth factor-β,TGF-β
R80 T220 T148 causeOf TGF-β,induces
R81 T220 T168 causeOf TGF-β,induces

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T467 32-60 P01137 denotes transforming growth factor-β
T468 62-67 P01137 denotes TGF-β
T469 99-133 Q13761 denotes Runt-related transcription factors
T470 99-133 Q01196 denotes Runt-related transcription factors
T471 99-133 Q13950 denotes Runt-related transcription factors
T472 134-139 Q01196 denotes RUNX1
T473 144-149 Q13761 denotes RUNX3
T474 153-156 P01730 denotes CD4

test2

Id Subject Object Predicate Lexical cue
T82 32-60 Protein denotes transforming growth factor-β
T83 62-67 Protein denotes TGF-β
T84 69-76 Positive_regulation denotes induces
T85 81-91 Gene_expression denotes expression
T86 134-139 Protein denotes RUNX1
T87 144-149 Protein denotes RUNX3
T88 153-156 Protein denotes CD4
T89 196-208 Positive_regulation denotes prerequisite
R710 T82 T83 equivalentTo transforming growth factor-β,TGF-β
R711 T82 T84 causeOf transforming growth factor-β,induces
R712 T83 T84 causeOf TGF-β,induces
R713 T85 T84 themeOf expression,induces
R714 T86 T85 themeOf RUNX1,expression
R715 T87 T85 themeOf RUNX3,expression