PMC:2806624 / 2940-3235
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1545 | 4-9 | VB | denotes | binds |
T1546 | 10-12 | TO | denotes | to |
T1547 | 13-31 | NN | denotes | the FOXP3 promoter |
T1548 | 32-35 | CC | denotes | and |
T1549 | 36-39 | MD | denotes | can |
T1550 | 40-47 | VB | denotes | repress |
T1551 | 48-51 | DT | denotes | the |
T1552 | 52-57 | NN | denotes | FOXP3 |
T1553 | 58-74 | NN | denotes | trans-activation |
T1554 | 75-82 | NN | denotes | process |
T1555 | 83-91 | RB | denotes | directly |
T1556 | 92-94 | IN | denotes | in |
T1557 | 95-98 | NN | denotes | Th2 |
T1558 | 99-104 | NN | denotes | cells |
T1559 | 105-106 | -LRB- | denotes | ( |
T1560 | 106-112 | NNP | denotes | Mantel |
T1561 | 113-115 | FW | denotes | et |
T1562 | 116-119 | FW | denotes | al. |
T1563 | 119-120 | -COMMA- | denotes | , |
T1564 | 121-125 | CD | denotes | 2007 |
T1565 | 125-126 | -RRB- | denotes | ) |
T1566 | 128-130 | PRP | denotes | It |
T1567 | 131-134 | VB | denotes | was |
T1568 | 135-142 | RB | denotes | further |
T1569 | 143-155 | VB | denotes | demonstrated |
T1570 | 156-160 | IN | denotes | that |
T1571 | 161-165 | CC | denotes | both |
T1572 | 166-169 | NN | denotes | Th1 |
T1573 | 170-173 | CC | denotes | and |
T1574 | 174-177 | NN | denotes | Th2 |
T1575 | 178-191 | NN | denotes | transcription |
T1576 | 192-199 | NN | denotes | factors |
T1577 | 200-205 | NN | denotes | T-bet |
T1578 | 206-209 | CC | denotes | and |
T1579 | 210-215 | NN | denotes | GATA3 |
T1580 | 216-222 | VB | denotes | oppose |
T1581 | 223-233 | JJ | denotes | peripheral |
T1582 | 234-243 | NN | denotes | induction |
T1583 | 244-246 | IN | denotes | of |
T1584 | 247-255 | NN | denotes | Foxp3+ T |
T1585 | 256-259 | NN | denotes | reg |
T1586 | 260-265 | NN | denotes | cells |
T1587 | 266-268 | IN | denotes | in |
T1588 | 269-273 | NN | denotes | mice |
T1589 | 274-281 | IN | denotes | through |
T1590 | 282-288 | NN | denotes | STAT1- |
T1591 | 288-289 | -COMMA- | denotes | , |
R1131 | T1545 | T1546 | arg1Of | binds,to |
R1132 | T1545 | T1548 | arg1Of | binds,and |
R1133 | T1547 | T1546 | arg2Of | the FOXP3 promoter,to |
R1134 | T1550 | T1548 | arg2Of | repress,and |
R1135 | T1550 | T1549 | arg2Of | repress,can |
R1136 | T1550 | T1555 | arg1Of | repress,directly |
R1137 | T1550 | T1556 | arg1Of | repress,in |
R1138 | T1554 | T1550 | arg2Of | process,repress |
R1139 | T1554 | T1551 | arg1Of | process,the |
R1140 | T1554 | T1552 | arg1Of | process,FOXP3 |
R1141 | T1554 | T1553 | arg1Of | process,trans-activation |
R1142 | T1558 | T1556 | arg2Of | cells,in |
R1143 | T1558 | T1557 | arg1Of | cells,Th2 |
R1144 | T1558 | T1559 | arg1Of | cells,( |
R1145 | T1560 | T1559 | arg2Of | Mantel,( |
R1146 | T1560 | T1561 | arg1Of | Mantel,et |
R1147 | T1560 | T1562 | arg1Of | Mantel,al. |
R1148 | T1560 | T1563 | arg1Of | Mantel,"," |
R1149 | T1564 | T1563 | arg2Of | 2007,"," |
R1150 | T1565 | T1559 | arg3Of | ),( |
R1151 | T1569 | T1568 | arg1Of | demonstrated,further |
R1152 | T1572 | T1573 | arg1Of | Th1,and |
R1153 | T1574 | T1573 | arg2Of | Th2,and |
R1154 | T1577 | T1578 | arg1Of | T-bet,and |
R1155 | T1578 | T1571 | arg1Of | and,both |
R1156 | T1578 | T1572 | arg1Of | and,Th1 |
R1157 | T1578 | T1574 | arg1Of | and,Th2 |
R1158 | T1578 | T1575 | arg1Of | and,transcription |
R1159 | T1578 | T1576 | arg1Of | and,factors |
R1160 | T1578 | T1580 | arg1Of | and,oppose |
R1161 | T1579 | T1578 | arg2Of | GATA3,and |
R1162 | T1580 | T1569 | arg2Of | oppose,demonstrated |
R1163 | T1580 | T1570 | arg1Of | oppose,that |
R1164 | T1582 | T1580 | arg2Of | induction,oppose |
R1165 | T1582 | T1581 | arg1Of | induction,peripheral |
R1166 | T1582 | T1583 | arg1Of | induction,of |
R1167 | T1582 | T1587 | arg1Of | induction,in |
R1168 | T1586 | T1583 | arg2Of | cells,of |
R1169 | T1586 | T1584 | arg1Of | cells,Foxp3+ T |
R1170 | T1586 | T1585 | arg1Of | cells,reg |
R1171 | T1588 | T1587 | arg2Of | mice,in |
R1172 | T1588 | T1589 | arg1Of | mice,through |
R1173 | T1590 | T1589 | arg2Of | STAT1-,through |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2370 | 4-9 | NNS | denotes | binds |
T2371 | 10-12 | TO | denotes | to |
T2372 | 13-31 | NNP | denotes | the FOXP3 promoter |
T2373 | 32-35 | CC | denotes | and |
T2374 | 36-39 | MD | denotes | can |
T2375 | 40-47 | VB | denotes | repress |
T2376 | 48-51 | DT | denotes | the |
T2377 | 52-57 | CD | denotes | FOXP3 |
T2378 | 58-74 | NN | denotes | trans-activation |
T2379 | 75-82 | NN | denotes | process |
T2380 | 83-91 | RB | denotes | directly |
T2381 | 92-94 | IN | denotes | in |
T2382 | 95-98 | JJ | denotes | Th2 |
T2383 | 99-104 | NNS | denotes | cells |
T2384 | 105-106 | -LRB- | denotes | ( |
T2385 | 106-112 | NNP | denotes | Mantel |
T2386 | 113-115 | FW | denotes | et |
T2387 | 116-119 | FW | denotes | al. |
T2388 | 119-120 | , | denotes | , |
T2389 | 121-125 | CD | denotes | 2007 |
T2390 | 125-126 | -RRB- | denotes | ) |
T2391 | 126-127 | . | denotes | . |
T2392 | 128-130 | PRP | denotes | It |
T2393 | 131-134 | VBD | denotes | was |
T2394 | 135-142 | JJ | denotes | further |
T2395 | 143-155 | VBD | denotes | demonstrated |
T2396 | 156-160 | IN | denotes | that |
T2397 | 161-165 | DT | denotes | both |
T2398 | 166-169 | CD | denotes | Th1 |
T2399 | 170-173 | CC | denotes | and |
T2400 | 174-177 | CD | denotes | Th2 |
T2401 | 178-191 | NN | denotes | transcription |
T2402 | 192-199 | NNS | denotes | factors |
T2403 | 200-205 | NNP | denotes | T-bet |
T2404 | 206-209 | CC | denotes | and |
T2405 | 210-215 | NNP | denotes | GATA3 |
T2406 | 216-222 | VBP | denotes | oppose |
T2407 | 223-233 | JJ | denotes | peripheral |
T2408 | 234-243 | NN | denotes | induction |
T2409 | 244-246 | IN | denotes | of |
T2410 | 247-252 | JJ | denotes | Foxp3 |
T2411 | 252-253 | NN | denotes | + |
T2412 | 254-255 | NNP | denotes | T |
T2413 | 256-259 | NN | denotes | reg |
T2414 | 260-265 | NNS | denotes | cells |
T2415 | 266-268 | IN | denotes | in |
T2416 | 269-273 | NNS | denotes | mice |
T2417 | 274-281 | IN | denotes | through |
T2418 | 282-287 | NNP | denotes | STAT1 |
T2419 | 287-288 | : | denotes | - |
T2420 | 288-289 | , | denotes | , |
T2421 | 290-295 | NNP | denotes | STAT4 |
R1812 | T2370 | T2375 | nsubj | binds,repress |
R1813 | T2371 | T2370 | prep | to,binds |
R1815 | T2372 | T2371 | pobj | the FOXP3 promoter,to |
R1816 | T2373 | T2370 | cc | and,binds |
R1817 | T2374 | T2375 | aux | can,repress |
R1819 | T2375 | T2375 | ROOT | repress,repress |
R1820 | T2376 | T2379 | det | the,process |
R1821 | T2377 | T2379 | nummod | FOXP3,process |
R1822 | T2378 | T2379 | compound | trans-activation,process |
R1824 | T2379 | T2375 | dobj | process,repress |
R1825 | T2380 | T2375 | advmod | directly,repress |
R1826 | T2381 | T2375 | prep | in,repress |
R1828 | T2382 | T2383 | amod | Th2,cells |
R1829 | T2383 | T2381 | pobj | cells,in |
R1831 | T2384 | T2387 | punct | (,al. |
R1832 | T2385 | T2387 | compound | Mantel,al. |
R1833 | T2386 | T2387 | nmod | et,al. |
R1835 | T2387 | T2375 | parataxis | al.,repress |
R1836 | T2388 | T2387 | punct | ",",al. |
R1838 | T2389 | T2387 | npadvmod | 2007,al. |
R1839 | T2390 | T2387 | punct | ),al. |
R1840 | T2391 | T2375 | punct | .,repress |
R1841 | T2392 | T2395 | nsubjpass | It,demonstrated |
R1845 | T2393 | T2395 | auxpass | was,demonstrated |
R1846 | T2394 | T2395 | advmod | further,demonstrated |
R1848 | T2395 | T2395 | ROOT | demonstrated,demonstrated |
R1850 | T2396 | T2406 | mark | that,oppose |
R1851 | T2397 | T2398 | det | both,Th1 |
R1853 | T2398 | T2406 | nsubj | Th1,oppose |
R1854 | T2399 | T2398 | cc | and,Th1 |
R1855 | T2400 | T2398 | conj | Th2,Th1 |
R1856 | T2401 | T2402 | compound | transcription,factors |
R1857 | T2402 | T2398 | conj | factors,Th1 |
R1858 | T2403 | T2402 | dobj | T-bet,factors |
R1859 | T2404 | T2403 | cc | and,T-bet |
R1861 | T2405 | T2403 | conj | GATA3,T-bet |
R1862 | T2406 | T2395 | ccomp | oppose,demonstrated |
R1863 | T2407 | T2408 | amod | peripheral,induction |
R1864 | T2408 | T2406 | dobj | induction,oppose |
R1865 | T2409 | T2408 | prep | of,induction |
R1866 | T2410 | T2414 | amod | Foxp3,cells |
R1868 | T2411 | T2414 | compound | +,cells |
R1869 | T2412 | T2414 | compound | T,cells |
R1871 | T2413 | T2414 | compound | reg,cells |
R1872 | T2414 | T2409 | pobj | cells,of |
R1873 | T2415 | T2408 | prep | in,induction |
R1875 | T2416 | T2415 | pobj | mice,in |
R1876 | T2417 | T2406 | prep | through,oppose |
R1877 | T2418 | T2417 | pobj | STAT1,through |
R1879 | T2419 | T2418 | punct | -,STAT1 |
R1880 | T2420 | T2418 | punct | ",",STAT1 |
R1881 | T2421 | T2418 | appos | STAT4,STAT1 |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2972 | 178-191 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcription |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3011 | 99-104 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T3012 | 260-265 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3221 | 4-9 | Binding | denotes | binds |
T3222 | 17-22 | Protein | denotes | FOXP3 |
T3223 | 23-31 | Entity | denotes | promoter |
T3224 | 40-47 | Negative_regulation | denotes | repress |
T3225 | 52-57 | Protein | denotes | FOXP3 |
T3226 | 58-74 | Positive_regulation | denotes | trans-activation |
T3227 | 200-205 | Protein | denotes | T-bet |
T3228 | 210-215 | Protein | denotes | GATA3 |
T3229 | 216-222 | Negative_regulation | denotes | oppose |
T3230 | 216-222 | Negative_regulation | denotes | oppose |
T3231 | 234-243 | Positive_regulation | denotes | induction |
T3232 | 247-252 | Protein | denotes | Foxp3 |
T3233 | 282-287 | Protein | denotes | STAT1 |
T3234 | 290-295 | Protein | denotes | STAT4 |
R2524 | T3221 | T3224 | causeOf | binds,repress |
R2526 | T3223 | T3221 | themeOf | promoter,binds |
R2527 | T3223 | T3222 | partOf | promoter,FOXP3 |
R2528 | T3225 | T3226 | themeOf | FOXP3,trans-activation |
R2532 | T3226 | T3224 | themeOf | trans-activation,repress |
R2535 | T3227 | T3229 | causeOf | T-bet,oppose |
R2537 | T3228 | T3230 | causeOf | GATA3,oppose |
R2546 | T3231 | T3229 | themeOf | induction,oppose |
R2547 | T3231 | T3230 | themeOf | induction,oppose |
R2549 | T3232 | T3231 | themeOf | Foxp3,induction |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3050 | 52-57 | Protein | denotes | FOXP3 |
T3051 | 4-9 | Binding | denotes | binds |
T3052 | 40-47 | Negative_regulation | denotes | repress |
T3053 | 166-169 | Protein | denotes | Th1 |
T3054 | 174-205 | Protein | denotes | Th2 transcription factors T-bet |
T3055 | 210-215 | Protein | denotes | GATA3 |
T3056 | 247-252 | Protein | denotes | Foxp3 |
T3057 | 282-287 | Protein | denotes | STAT1 |
T3058 | 290-295 | Protein | denotes | STAT4 |
T3060 | 234-243 | Positive_regulation | denotes | induction |
T3062 | 216-222 | Negative_regulation | denotes | oppose |
T3063 | 216-222 | Negative_regulation | denotes | oppose |
T3064 | 216-222 | Negative_regulation | denotes | oppose |
T3065 | 216-222 | Negative_regulation | denotes | oppose |
R2456 | T3050 | T3052 | themeOf | FOXP3,repress |
R2457 | T3054 | T3062 | causeOf | Th2 transcription factors T-bet,oppose |
R2460 | T3055 | T3063 | causeOf | GATA3,oppose |
R2465 | T3056 | T3060 | themeOf | Foxp3,induction |
R2467 | T3057 | T3064 | causeOf | STAT1,oppose |
R2468 | T3058 | T3065 | causeOf | STAT4,oppose |
R2473 | T3060 | T3062 | themeOf | induction,oppose |
R2475 | T3060 | T3063 | themeOf | induction,oppose |
R2476 | T3060 | T3064 | themeOf | induction,oppose |
R2477 | T3060 | T3065 | themeOf | induction,oppose |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1211 | 4-9 | Binding | denotes | binds |
T1212 | 17-22 | Protein | denotes | FOXP3 |
T1213 | 23-31 | Entity | denotes | promoter |
T1214 | 40-47 | Negative_regulation | denotes | repress |
T1215 | 52-57 | Protein | denotes | FOXP3 |
T1216 | 58-74 | Positive_regulation | denotes | trans-activation |
T1217 | 200-205 | Protein | denotes | T-bet |
T1218 | 210-215 | Protein | denotes | GATA3 |
T1219 | 216-222 | Negative_regulation | denotes | oppose |
T1220 | 216-222 | Negative_regulation | denotes | oppose |
T1221 | 234-243 | Positive_regulation | denotes | induction |
T1222 | 247-252 | Protein | denotes | Foxp3 |
T1223 | 282-287 | Protein | denotes | STAT1 |
T1224 | 290-295 | Protein | denotes | STAT4 |
R836 | T1211 | T1214 | causeOf | binds,repress |
R837 | T1213 | T1211 | themeOf | promoter,binds |
R838 | T1213 | T1212 | partOf | promoter,FOXP3 |
R839 | T1215 | T1216 | themeOf | FOXP3,trans-activation |
R840 | T1216 | T1214 | themeOf | trans-activation,repress |
R841 | T1217 | T1219 | causeOf | T-bet,oppose |
R842 | T1218 | T1220 | causeOf | GATA3,oppose |
R849 | T1221 | T1219 | themeOf | induction,oppose |
R850 | T1221 | T1220 | themeOf | induction,oppose |
R851 | T1222 | T1221 | themeOf | Foxp3,induction |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2045 | 52-57 | Q9BZS1 | denotes | FOXP3 |
T2046 | 200-205 | Q9UL17 | denotes | T-bet |
T2047 | 210-215 | P23771 | denotes | GATA3 |
T2048 | 247-252 | Q9BZS1 | denotes | Foxp3 |
T2049 | 290-295 | Q14765 | denotes | STAT4 |
test2
Id | Subject | Object | Predicate | Lexical cue | Speculation |
---|---|---|---|---|---|
T1129 | 4-9 | Binding | denotes | binds | |
T1130 | 13-31 | Protein | denotes | the FOXP3 promoter | |
T1131 | 40-47 | Negative_regulation | denotes | repress | |
T1132 | 52-57 | Protein | denotes | FOXP3 | |
T1133 | 64-74 | Positive_regulation | denotes | activation | |
T1134 | 200-205 | Protein | denotes | T-bet | |
T1135 | 210-215 | Protein | denotes | GATA3 | |
T1136 | 234-243 | Positive_regulation | denotes | induction | true |
T1137 | 247-252 | Protein | denotes | Foxp3 | |
T1138 | 282-287 | Protein | denotes | STAT1 | true |
T1139 | 290-295 | Protein | denotes | STAT4 | |
R800 | T1129 | T1131 | causeOf | binds,repress | |
R801 | T1130 | T1129 | themeOf | the FOXP3 promoter,binds | |
R802 | T1133 | T1131 | themeOf | activation,repress | |
R803 | T1137 | T1136 | themeOf | Foxp3,induction |