PMC:2806624 / 28808-28970 JSONTXT

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    2_test

    {"project":"2_test","denotations":[{"id":"19917773-15809351-59851504","span":{"begin":128,"end":132},"obj":"15809351"},{"id":"19917773-17525753-59851505","span":{"begin":156,"end":160},"obj":"17525753"}],"text":"It was shown that TGF-β is mandatory for the maintenance of peripheral T reg cells and their expression of Foxp3 (Marie et al., 2005; Rubtsov and Rudensky, 2007)."}

    pmc-enju-pas

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    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T15815","span":{"begin":0,"end":2},"obj":"PRP"},{"id":"T15816","span":{"begin":3,"end":6},"obj":"VBD"},{"id":"T15817","span":{"begin":7,"end":12},"obj":"VBN"},{"id":"T15818","span":{"begin":13,"end":17},"obj":"IN"},{"id":"T15819","span":{"begin":18,"end":23},"obj":"NNP"},{"id":"T15820","span":{"begin":24,"end":26},"obj":"VBZ"},{"id":"T15821","span":{"begin":27,"end":36},"obj":"JJ"},{"id":"T15822","span":{"begin":37,"end":40},"obj":"IN"},{"id":"T15823","span":{"begin":41,"end":44},"obj":"DT"},{"id":"T15824","span":{"begin":45,"end":56},"obj":"NN"},{"id":"T15825","span":{"begin":57,"end":59},"obj":"IN"},{"id":"T15826","span":{"begin":60,"end":70},"obj":"JJ"},{"id":"T15827","span":{"begin":71,"end":72},"obj":"NNP"},{"id":"T15828","span":{"begin":73,"end":76},"obj":"NN"},{"id":"T15829","span":{"begin":77,"end":82},"obj":"NNS"},{"id":"T15830","span":{"begin":83,"end":86},"obj":"CC"},{"id":"T15831","span":{"begin":87,"end":92},"obj":"PRP$"},{"id":"T15832","span":{"begin":93,"end":103},"obj":"NN"},{"id":"T15833","span":{"begin":104,"end":106},"obj":"IN"},{"id":"T15834","span":{"begin":107,"end":112},"obj":"NNP"},{"id":"T15835","span":{"begin":113,"end":114},"obj":"-LRB-"},{"id":"T15836","span":{"begin":114,"end":119},"obj":"NNP"},{"id":"T15837","span":{"begin":120,"end":122},"obj":"FW"},{"id":"T15838","span":{"begin":123,"end":126},"obj":"FW"},{"id":"T15839","span":{"begin":126,"end":127},"obj":","},{"id":"T15840","span":{"begin":128,"end":132},"obj":"CD"},{"id":"T15841","span":{"begin":132,"end":133},"obj":":"},{"id":"T15842","span":{"begin":134,"end":141},"obj":"NNP"},{"id":"T15843","span":{"begin":142,"end":145},"obj":"CC"},{"id":"T15844","span":{"begin":146,"end":154},"obj":"NNP"},{"id":"T15845","span":{"begin":154,"end":155},"obj":","},{"id":"T15846","span":{"begin":156,"end":160},"obj":"CD"},{"id":"T15847","span":{"begin":160,"end":161},"obj":"-RRB-"},{"id":"T15848","span":{"begin":161,"end":162},"obj":"."}],"relations":[{"id":"R12279","pred":"nsubjpass","subj":"T15815","obj":"T15817"},{"id":"R12282","pred":"auxpass","subj":"T15816","obj":"T15817"},{"id":"R12284","pred":"ROOT","subj":"T15817","obj":"T15817"},{"id":"R12285","pred":"mark","subj":"T15818","obj":"T15820"},{"id":"R12287","pred":"nsubj","subj":"T15819","obj":"T15820"},{"id":"R12288","pred":"ccomp","subj":"T15820","obj":"T15817"},{"id":"R12289","pred":"acomp","subj":"T15821","obj":"T15820"},{"id":"R12291","pred":"prep","subj":"T15822","obj":"T15821"},{"id":"R12292","pred":"det","subj":"T15823","obj":"T15824"},{"id":"R12294","pred":"pobj","subj":"T15824","obj":"T15822"},{"id":"R12295","pred":"prep","subj":"T15825","obj":"T15824"},{"id":"R12296","pred":"amod","subj":"T15826","obj":"T15829"},{"id":"R12298","pred":"compound","subj":"T15827","obj":"T15829"},{"id":"R12299","pred":"compound","subj":"T15828","obj":"T15829"},{"id":"R12301","pred":"pobj","subj":"T15829","obj":"T15825"},{"id":"R12302","pred":"cc","subj":"T15830","obj":"T15824"},{"id":"R12303","pred":"poss","subj":"T15831","obj":"T15832"},{"id":"R12305","pred":"conj","subj":"T15832","obj":"T15824"},{"id":"R12306","pred":"prep","subj":"T15833","obj":"T15832"},{"id":"R12307","pred":"pobj","subj":"T15834","obj":"T15833"},{"id":"R12309","pred":"punct","subj":"T15835","obj":"T15834"},{"id":"R12310","pred":"compound","subj":"T15836","obj":"T15838"},{"id":"R12312","pred":"nmod","subj":"T15837","obj":"T15838"},{"id":"R12313","pred":"appos","subj":"T15838","obj":"T15834"},{"id":"R12314","pred":"punct","subj":"T15839","obj":"T15838"},{"id":"R12315","pred":"appos","subj":"T15840","obj":"T15838"},{"id":"R12316","pred":"punct","subj":"T15841","obj":"T15817"},{"id":"R12317","pred":"ROOT","subj":"T15842","obj":"T15842"},{"id":"R12318","pred":"cc","subj":"T15843","obj":"T15842"},{"id":"R12320","pred":"conj","subj":"T15844","obj":"T15842"},{"id":"R12321","pred":"punct","subj":"T15845","obj":"T15844"},{"id":"R12324","pred":"npadvmod","subj":"T15846","obj":"T15844"},{"id":"R12325","pred":"punct","subj":"T15847","obj":"T15844"},{"id":"R12326","pred":"punct","subj":"T15848","obj":"T15817"}],"text":"It was shown that TGF-β is mandatory for the maintenance of peripheral T reg cells and their expression of Foxp3 (Marie et al., 2005; Rubtsov and Rudensky, 2007)."}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T17701","span":{"begin":77,"end":82},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"It was shown that TGF-β is mandatory for the maintenance of peripheral T reg cells and their expression of Foxp3 (Marie et al., 2005; Rubtsov and Rudensky, 2007)."}

    sentences

    {"project":"sentences","denotations":[{"id":"T12858","span":{"begin":0,"end":162},"obj":"Sentence"},{"id":"T195","span":{"begin":0,"end":162},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"It was shown that TGF-β is mandatory for the maintenance of peripheral T reg cells and their expression of Foxp3 (Marie et al., 2005; Rubtsov and Rudensky, 2007)."}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T18332","span":{"begin":18,"end":23},"obj":"Protein"},{"id":"T18333","span":{"begin":27,"end":36},"obj":"Positive_regulation"},{"id":"T18334","span":{"begin":93,"end":103},"obj":"Gene_expression"},{"id":"T18335","span":{"begin":107,"end":112},"obj":"Protein"}],"relations":[{"id":"R14453","pred":"causeOf","subj":"T18332","obj":"T18333"},{"id":"R14455","pred":"themeOf","subj":"T18334","obj":"T18333"},{"id":"R14456","pred":"themeOf","subj":"T18335","obj":"T18334"}],"text":"It was shown that TGF-β is mandatory for the maintenance of peripheral T reg cells and their expression of Foxp3 (Marie et al., 2005; Rubtsov and Rudensky, 2007)."}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T12956","span":{"begin":27,"end":36},"obj":"Positive_regulation"},{"id":"T12957","span":{"begin":93,"end":103},"obj":"Gene_expression"},{"id":"T13139","span":{"begin":18,"end":23},"obj":"Protein"},{"id":"T13140","span":{"begin":107,"end":112},"obj":"Protein"}],"relations":[{"id":"R9839","pred":"themeOf","subj":"T12957","obj":"T12956"},{"id":"R9949","pred":"causeOf","subj":"T13139","obj":"T12956"},{"id":"R9950","pred":"themeOf","subj":"T13140","obj":"T12957"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"It was shown that TGF-β is mandatory for the maintenance of peripheral T reg cells and their expression of Foxp3 (Marie et al., 2005; Rubtsov and Rudensky, 2007)."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T15224","span":{"begin":18,"end":23},"obj":"P01137"},{"id":"T15225","span":{"begin":107,"end":112},"obj":"Q9BZS1"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"It was shown that TGF-β is mandatory for the maintenance of peripheral T reg cells and their expression of Foxp3 (Marie et al., 2005; Rubtsov and Rudensky, 2007)."}

    test2

    {"project":"test2","denotations":[{"id":"T12592","span":{"begin":18,"end":23},"obj":"Protein"},{"id":"T12593","span":{"begin":93,"end":103},"obj":"Gene_expression"},{"id":"T12594","span":{"begin":107,"end":112},"obj":"Protein"}],"relations":[{"id":"R9683","pred":"themeOf","subj":"T12594","obj":"T12593"}],"text":"It was shown that TGF-β is mandatory for the maintenance of peripheral T reg cells and their expression of Foxp3 (Marie et al., 2005; Rubtsov and Rudensky, 2007)."}