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PMC:2806624 / 17939-18103 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T7741 0-2 DT denotes No
T7742 3-12 NN denotes reduction
T7743 13-15 IN denotes in
T7744 16-26 NN denotes luciferase
T7745 27-35 NN denotes activity
T7746 36-39 VB denotes was
T7747 40-48 VB denotes observed
T7748 49-53 WRB denotes when
T7749 54-57 DT denotes the
T7750 58-61 NN denotes −53
T7751 62-66 NN denotes site
T7752 67-70 VB denotes was
T7753 71-78 VB denotes mutated
T7754 79-82 CC denotes and
T7755 83-87 RB denotes only
T7756 88-89 DT denotes a
T7757 90-96 JJ denotes slight
T7758 97-106 NN denotes reduction
T7759 107-111 WRB denotes when
T7760 112-118 CC denotes either
T7761 119-122 DT denotes the
T7762 123-127 CD denotes −287
T7763 128-130 CC denotes or
T7764 131-135 CD denotes −333
T7765 136-140 NN denotes site
T7766 141-144 VB denotes was
T7767 145-152 VB denotes mutated
T7768 153-154 -LRB- denotes (
T7769 154-158 NN denotes Fig.
T7770 159-160 CD denotes 4
T7771 161-162 NN denotes B
T7772 162-163 -RRB- denotes )
R6218 T7742 T7741 arg1Of reduction,No
R6219 T7742 T7743 arg1Of reduction,in
R6220 T7742 T7746 arg1Of reduction,was
R6221 T7742 T7747 arg2Of reduction,observed
R6222 T7745 T7743 arg2Of activity,in
R6223 T7745 T7744 arg1Of activity,luciferase
R6224 T7747 T7746 arg2Of observed,was
R6225 T7747 T7748 arg1Of observed,when
R6226 T7747 T7759 arg1Of observed,when
R6227 T7751 T7749 arg1Of site,the
R6228 T7751 T7750 arg1Of site,−53
R6229 T7751 T7752 arg1Of site,was
R6230 T7751 T7753 arg2Of site,mutated
R6231 T7753 T7748 arg2Of mutated,when
R6232 T7753 T7752 arg2Of mutated,was
R6233 T7753 T7754 arg1Of mutated,and
R6234 T7758 T7747 arg3Of reduction,observed
R6235 T7758 T7755 arg1Of reduction,only
R6236 T7758 T7756 arg1Of reduction,a
R6237 T7758 T7757 arg1Of reduction,slight
R6238 T7762 T7763 arg1Of −287,or
R6239 T7764 T7763 arg2Of −333,or
R6240 T7765 T7760 arg1Of site,either
R6241 T7765 T7761 arg1Of site,the
R6242 T7765 T7762 arg1Of site,−287
R6243 T7765 T7764 arg1Of site,−333
R6244 T7765 T7766 arg1Of site,was
R6245 T7765 T7767 arg2Of site,mutated
R6246 T7767 T7759 arg2Of mutated,when
R6247 T7767 T7766 arg2Of mutated,was
R6248 T7767 T7768 arg1Of mutated,(
R6249 T7771 T7768 arg2Of B,(
R6250 T7771 T7769 arg1Of B,Fig.
R6251 T7771 T7770 arg1Of B,4
R6252 T7772 T7768 arg3Of ),(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T8167 0-2 DT denotes No
T8168 3-12 NN denotes reduction
T8169 13-15 IN denotes in
T8170 16-26 NN denotes luciferase
T8171 27-35 NN denotes activity
T8172 36-39 VBD denotes was
T8173 40-48 VBN denotes observed
T8174 49-53 WRB denotes when
T8175 54-57 DT denotes the
T8176 58-59 NN denotes −
T8177 59-61 CD denotes 53
T8178 62-66 NN denotes site
T8179 67-70 VBD denotes was
T8180 71-78 VBN denotes mutated
T8181 79-82 CC denotes and
T8182 83-87 RB denotes only
T8183 88-89 DT denotes a
T8184 90-96 JJ denotes slight
T8185 97-106 NN denotes reduction
T8186 107-111 WRB denotes when
T8187 112-118 CC denotes either
T8188 119-122 DT denotes the
T8189 123-124 NN denotes −
T8190 124-127 CD denotes 287
T8191 128-130 CC denotes or
T8192 131-132 CD denotes −
T8193 132-135 CD denotes 333
T8194 136-140 NN denotes site
T8195 141-144 VBD denotes was
T8196 145-152 VBN denotes mutated
T8197 153-154 -LRB- denotes (
T8198 154-158 NN denotes Fig.
T8199 159-160 CD denotes 4
T8200 161-162 NNP denotes B
T8201 162-163 -RRB- denotes )
T8202 163-164 . denotes .
R6582 T8167 T8168 det No,reduction
R6583 T8168 T8173 nsubjpass reduction,observed
R6584 T8169 T8168 prep in,reduction
R6585 T8170 T8171 compound luciferase,activity
R6586 T8171 T8169 pobj activity,in
R6587 T8172 T8173 auxpass was,observed
R6588 T8173 T8173 ROOT observed,observed
R6589 T8174 T8180 advmod when,mutated
R6590 T8175 T8178 det the,site
R6591 T8176 T8178 nmod −,site
R6592 T8177 T8178 nummod 53,site
R6593 T8178 T8180 nsubjpass site,mutated
R6594 T8179 T8180 auxpass was,mutated
R6595 T8180 T8173 advcl mutated,observed
R6596 T8181 T8180 cc and,mutated
R6597 T8182 T8185 advmod only,reduction
R6598 T8183 T8185 det a,reduction
R6599 T8184 T8185 amod slight,reduction
R6600 T8185 T8180 conj reduction,mutated
R6601 T8186 T8196 advmod when,mutated
R6602 T8187 T8189 preconj either,−
R6603 T8188 T8189 det the,−
R6604 T8189 T8194 nmod −,site
R6605 T8190 T8189 nummod 287,−
R6606 T8191 T8190 cc or,287
R6607 T8192 T8190 conj −,287
R6608 T8193 T8194 nummod 333,site
R6609 T8194 T8196 nsubjpass site,mutated
R6610 T8195 T8196 auxpass was,mutated
R6611 T8196 T8185 relcl mutated,reduction
R6612 T8197 T8200 punct (,B
R6613 T8198 T8200 nmod Fig.,B
R6614 T8199 T8198 nummod 4,Fig.
R6615 T8200 T8196 oprd B,mutated
R6616 T8201 T8185 punct ),reduction
R6617 T8202 T8173 punct .,observed

GO-BP

Id Subject Object Predicate Lexical cue
T8355 16-35 http://purl.obolibrary.org/obo/GO_0045289 denotes luciferase activity
T8358 16-35 http://purl.obolibrary.org/obo/GO_0047077 denotes luciferase activity
T8361 16-35 http://purl.obolibrary.org/obo/GO_0047712 denotes luciferase activity
T8364 16-35 http://purl.obolibrary.org/obo/GO_0050248 denotes luciferase activity
T8367 16-35 http://purl.obolibrary.org/obo/GO_0050397 denotes luciferase activity

GO-MF

Id Subject Object Predicate Lexical cue
T8466 16-35 http://purl.obolibrary.org/obo/GO_0045289 denotes luciferase activity
T8469 16-35 http://purl.obolibrary.org/obo/GO_0047077 denotes luciferase activity
T8472 16-35 http://purl.obolibrary.org/obo/GO_0047712 denotes luciferase activity
T8475 16-35 http://purl.obolibrary.org/obo/GO_0050248 denotes luciferase activity
T8478 16-35 http://purl.obolibrary.org/obo/GO_0050397 denotes luciferase activity

sentences

Id Subject Object Predicate Lexical cue
T7561 0-164 Sentence denotes No reduction in luciferase activity was observed when the −53 site was mutated and only a slight reduction when either the −287 or −333 site was mutated (Fig. 4 B).
T121 0-164 Sentence denotes No reduction in luciferase activity was observed when the −53 site was mutated and only a slight reduction when either the −287 or −333 site was mutated (Fig. 4 B).

events-check-again

Id Subject Object Predicate Lexical cue Negation
T8707 3-12 Negative_regulation denotes reduction true
T8708 16-26 Protein denotes luciferase
T8709 97-106 Negative_regulation denotes reduction
R6993 T8708 T8707 themeOf luciferase,reduction
R6994 T8708 T8709 themeOf luciferase,reduction

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T8533 16-26 Protein denotes luciferase
T8534 3-12 Negative_regulation denotes reduction
T8535 97-106 Negative_regulation denotes reduction
R6865 T8533 T8534 themeOf luciferase,reduction
R6866 T8533 T8535 themeOf luciferase,reduction

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Negation
T7527 3-12 Negative_regulation denotes reduction true
T7528 16-26 Protein denotes luciferase
T7529 97-106 Negative_regulation denotes reduction
R6020 T7528 T7527 themeOf luciferase,reduction
R6021 T7528 T7529 themeOf luciferase,reduction

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T7953 16-26 P08659 denotes luciferase

test2

Id Subject Object Predicate Lexical cue
T7440 3-12 Negative_regulation denotes reduction
T7441 16-26 Protein denotes luciferase
R5955 T7441 T7440 themeOf luciferase,reduction