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PMC:2806624 / 1533-1821 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1296 0-10 JJ denotes Regulatory
T1297 11-12 NN denotes T
T1298 13-14 -LRB- denotes (
T1299 14-15 NN denotes T
T1300 16-19 NN denotes reg
T1301 19-20 -RRB- denotes )
T1302 21-26 NN denotes cells
T1303 27-37 VB denotes expressing
T1304 38-41 DT denotes the
T1305 42-55 NN denotes transcription
T1306 56-62 NN denotes factor
T1307 63-71 NN denotes forkhead
T1308 72-75 NN denotes box
T1309 76-78 NN denotes P3
T1310 79-80 -LRB- denotes (
T1311 80-85 NN denotes FOXP3
T1312 85-86 -COMMA- denotes ,
T1313 87-92 JJ denotes human
T1314 92-93 -COLON- denotes ;
T1315 94-99 NN denotes Foxp3
T1316 99-100 -COMMA- denotes ,
T1317 101-106 NN denotes mouse
T1318 106-107 -RRB- denotes )
T1319 108-112 VB denotes play
T1320 113-115 DT denotes an
T1321 116-125 JJ denotes essential
T1322 126-130 NN denotes role
T1323 131-133 IN denotes in
T1324 134-145 VB denotes controlling
T1325 146-152 JJ denotes immune
T1326 153-162 NN denotes responses
T1327 163-165 TO denotes to
T1328 166-178 NN denotes autoantigens
T1329 178-179 -COMMA- denotes ,
T1330 180-189 NN denotes allergens
T1331 189-190 -COMMA- denotes ,
T1332 191-196 NN denotes tumor
T1333 197-205 NN denotes antigens
T1334 205-206 -COMMA- denotes ,
T1335 207-222 NN denotes transplantation
T1336 223-231 NN denotes antigens
T1337 231-232 -COMMA- denotes ,
T1338 233-236 CC denotes and
T1339 237-247 JJ denotes infectious
T1340 248-254 NN denotes agents
T1341 255-256 -LRB- denotes (
T1342 256-260 NNP denotes Hori
T1343 261-263 FW denotes et
T1344 264-267 FW denotes al.
T1345 267-268 -COMMA- denotes ,
T1346 269-273 CD denotes 2003
T1347 273-274 -COLON- denotes ;
T1348 275-280 NNP denotes Akdis
T1349 280-281 -COMMA- denotes ,
T1350 282-286 CD denotes 2006
T1351 286-287 -RRB- denotes )
R878 T1297 T1296 arg1Of T,Regulatory
R879 T1297 T1298 arg1Of T,(
R880 T1300 T1298 arg2Of reg,(
R881 T1300 T1299 arg1Of reg,T
R882 T1301 T1298 arg3Of ),(
R883 T1302 T1297 arg1Of cells,T
R884 T1302 T1303 arg1Of cells,expressing
R885 T1302 T1310 arg1Of cells,(
R886 T1302 T1319 arg1Of cells,play
R887 T1302 T1324 arg1Of cells,controlling
R888 T1309 T1303 arg2Of P3,expressing
R889 T1309 T1304 arg1Of P3,the
R890 T1309 T1305 arg1Of P3,transcription
R891 T1309 T1306 arg1Of P3,factor
R892 T1309 T1307 arg1Of P3,forkhead
R893 T1309 T1308 arg1Of P3,box
R894 T1311 T1310 arg2Of FOXP3,(
R895 T1311 T1312 arg1Of FOXP3,","
R896 T1311 T1316 arg1Of FOXP3,","
R897 T1313 T1314 arg1Of human,;
R898 T1314 T1312 arg2Of ;,","
R899 T1315 T1314 arg2Of Foxp3,;
R900 T1317 T1316 arg2Of mouse,","
R901 T1318 T1310 arg3Of ),(
R902 T1319 T1323 arg1Of play,in
R903 T1322 T1319 arg2Of role,play
R904 T1322 T1320 arg1Of role,an
R905 T1322 T1321 arg1Of role,essential
R906 T1324 T1323 arg2Of controlling,in
R907 T1326 T1324 arg2Of responses,controlling
R908 T1326 T1325 arg1Of responses,immune
R909 T1326 T1327 arg1Of responses,to
R910 T1328 T1329 arg1Of autoantigens,","
R911 T1329 T1331 arg1Of ",",","
R912 T1330 T1329 arg2Of allergens,","
R913 T1331 T1334 arg1Of ",",","
R914 T1333 T1331 arg2Of antigens,","
R915 T1333 T1332 arg1Of antigens,tumor
R916 T1334 T1338 arg1Of ",",and
R917 T1336 T1334 arg2Of antigens,","
R918 T1336 T1335 arg1Of antigens,transplantation
R919 T1338 T1327 arg2Of and,to
R920 T1338 T1337 arg1Of and,","
R921 T1340 T1338 arg2Of agents,and
R922 T1340 T1339 arg1Of agents,infectious
R923 T1340 T1341 arg1Of agents,(
R924 T1342 T1341 arg2Of Hori,(
R925 T1342 T1343 arg1Of Hori,et
R926 T1342 T1344 arg1Of Hori,al.
R927 T1342 T1345 arg1Of Hori,","
R928 T1342 T1347 arg1Of Hori,;
R929 T1346 T1345 arg2Of 2003,","
R930 T1348 T1347 arg2Of Akdis,;
R931 T1348 T1349 arg1Of Akdis,","
R932 T1350 T1349 arg2Of 2006,","
R933 T1351 T1341 arg3Of ),(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2115 0-10 NNP denotes Regulatory
T2116 11-12 NNP denotes T
T2117 13-14 -LRB- denotes (
T2118 14-15 NNP denotes T
T2119 16-19 NN denotes reg
T2120 19-20 -RRB- denotes )
T2121 21-26 NNS denotes cells
T2122 27-37 VBG denotes expressing
T2123 38-41 DT denotes the
T2124 42-55 NN denotes transcription
T2125 56-62 NN denotes factor
T2126 63-71 NN denotes forkhead
T2127 72-75 NN denotes box
T2128 76-78 NN denotes P3
T2129 79-80 -LRB- denotes (
T2130 80-85 CD denotes FOXP3
T2131 85-86 , denotes ,
T2132 87-92 JJ denotes human
T2133 92-93 : denotes ;
T2134 94-99 NNP denotes Foxp3
T2135 99-100 , denotes ,
T2136 101-106 NN denotes mouse
T2137 106-107 -RRB- denotes )
T2138 108-112 VBP denotes play
T2139 113-115 DT denotes an
T2140 116-125 JJ denotes essential
T2141 126-130 NN denotes role
T2142 131-133 IN denotes in
T2143 134-145 VBG denotes controlling
T2144 146-152 JJ denotes immune
T2145 153-162 NNS denotes responses
T2146 163-165 TO denotes to
T2147 166-178 NNS denotes autoantigens
T2148 178-179 , denotes ,
T2149 180-189 NNS denotes allergens
T2150 189-190 , denotes ,
T2151 191-196 NN denotes tumor
T2152 197-205 NNS denotes antigens
T2153 205-206 , denotes ,
T2154 207-222 NN denotes transplantation
T2155 223-231 NNS denotes antigens
T2156 231-232 , denotes ,
T2157 233-236 CC denotes and
T2158 237-247 JJ denotes infectious
T2159 248-254 NNS denotes agents
T2160 255-256 -LRB- denotes (
T2161 256-260 NNP denotes Hori
T2162 261-263 FW denotes et
T2163 264-267 FW denotes al.
T2164 267-268 , denotes ,
T2165 269-273 CD denotes 2003
T2166 273-274 : denotes ;
T2167 275-280 NNP denotes Akdis
T2168 280-281 , denotes ,
T2169 282-286 CD denotes 2006
T2170 286-287 -RRB- denotes )
T2171 287-288 . denotes .
R1616 T2115 T2116 compound Regulatory,T
R1617 T2116 T2121 compound T,cells
R1618 T2117 T2119 punct (,reg
R1619 T2118 T2119 compound T,reg
R1620 T2119 T2116 appos reg,T
R1621 T2120 T2119 punct ),reg
R1622 T2121 T2138 ccomp cells,play
R1623 T2122 T2121 acl expressing,cells
R1624 T2123 T2125 det the,factor
R1625 T2124 T2125 compound transcription,factor
R1626 T2125 T2122 dobj factor,expressing
R1627 T2126 T2128 compound forkhead,P3
R1628 T2127 T2128 compound box,P3
R1629 T2128 T2125 appos P3,factor
R1630 T2129 T2128 punct (,P3
R1631 T2130 T2128 appos FOXP3,P3
R1632 T2131 T2128 punct ",",P3
R1633 T2150 T2149 punct ",",allergens
R1634 T2132 T2128 amod human,P3
R1635 T2151 T2152 compound tumor,antigens
R1636 T2152 T2149 conj antigens,allergens
R1637 T2133 T2138 punct ;,play
R1638 T2153 T2152 punct ",",antigens
R1639 T2154 T2155 compound transplantation,antigens
R1640 T2134 T2138 nsubj Foxp3,play
R1641 T2135 T2134 punct ",",Foxp3
R1642 T2155 T2152 conj antigens,antigens
R1643 T2136 T2134 appos mouse,Foxp3
R1644 T2156 T2155 punct ",",antigens
R1645 T2137 T2134 punct ),Foxp3
R1646 T2138 T2138 ROOT play,play
R1647 T2139 T2141 det an,role
R1648 T2157 T2155 cc and,antigens
R1649 T2140 T2141 amod essential,role
R1650 T2158 T2159 amod infectious,agents
R1651 T2141 T2138 dobj role,play
R1652 T2159 T2155 conj agents,antigens
R1653 T2160 T2163 punct (,al.
R1654 T2142 T2141 prep in,role
R1655 T2161 T2163 compound Hori,al.
R1656 T2162 T2163 nmod et,al.
R1657 T2163 T2167 compound al.,Akdis
R1658 T2164 T2163 punct ",",al.
R1659 T2165 T2163 npadvmod 2003,al.
R1660 T2166 T2163 punct ;,al.
R1661 T2143 T2142 pcomp controlling,in
R1662 T2167 T2155 conj Akdis,antigens
R1663 T2168 T2167 punct ",",Akdis
R1664 T2169 T2167 npadvmod 2006,Akdis
R1665 T2170 T2167 punct ),Akdis
R1666 T2144 T2145 amod immune,responses
R1667 T2171 T2138 punct .,play
R1669 T2145 T2143 dobj responses,controlling
R1673 T2146 T2145 prep to,responses
R1677 T2147 T2146 pobj autoantigens,to
R1678 T2148 T2147 punct ",",autoantigens
R1681 T2149 T2147 conj allergens,autoantigens

GO-BP

Id Subject Object Predicate Lexical cue
T2969 42-55 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T2975 146-162 http://purl.obolibrary.org/obo/GO_0006955 denotes immune responses

GO-CC

Id Subject Object Predicate Lexical cue
T3007 21-26 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T1277 0-288 Sentence denotes Regulatory T (T reg) cells expressing the transcription factor forkhead box P3 (FOXP3, human; Foxp3, mouse) play an essential role in controlling immune responses to autoantigens, allergens, tumor antigens, transplantation antigens, and infectious agents (Hori et al., 2003; Akdis, 2006).
T12 0-288 Sentence denotes Regulatory T (T reg) cells expressing the transcription factor forkhead box P3 (FOXP3, human; Foxp3, mouse) play an essential role in controlling immune responses to autoantigens, allergens, tumor antigens, transplantation antigens, and infectious agents (Hori et al., 2003; Akdis, 2006).

events-check-again

Id Subject Object Predicate Lexical cue
T3206 27-37 Gene_expression denotes expressing
T3207 63-78 Protein denotes forkhead box P3
T3208 80-85 Protein denotes FOXP3
T3209 94-99 Protein denotes Foxp3
R2488 T3207 T3206 themeOf forkhead box P3,expressing
R2490 T3208 T3207 equivalentTo FOXP3,forkhead box P3
R2491 T3209 T3207 equivalentTo Foxp3,forkhead box P3

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T3023 42-78 Protein denotes transcription factor forkhead box P3
T3024 80-85 Protein denotes FOXP3
T3025 94-99 Protein denotes Foxp3
T3026 27-37 Gene_expression denotes expressing
T3027 27-37 Gene_expression denotes expressing
T3028 27-37 Gene_expression denotes expressing
R2440 T3025 T3028 themeOf Foxp3,expressing
R2442 T3023 T3026 themeOf transcription factor forkhead box P3,expressing
R2443 T3024 T3027 themeOf FOXP3,expressing

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T1196 27-37 Gene_expression denotes expressing
T1197 63-78 Protein denotes forkhead box P3
T1198 80-85 Protein denotes FOXP3
T1199 94-99 Protein denotes Foxp3
R827 T1197 T1196 themeOf forkhead box P3,expressing
R828 T1198 T1197 equivalentTo FOXP3,forkhead box P3
R829 T1199 T1197 equivalentTo Foxp3,forkhead box P3

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T2037 80-85 Q9BZS1 denotes FOXP3
T2038 94-99 Q9BZS1 denotes Foxp3

test2

Id Subject Object Predicate Lexical cue
T1115 27-37 Gene_expression denotes expressing
T1116 63-78 Protein denotes forkhead box P3
T1117 80-85 Protein denotes FOXP3
T1118 94-99 Protein denotes Foxp3
R793 T1116 T1115 themeOf forkhead box P3,expressing
R794 T1117 T1116 equivalentTo FOXP3,forkhead box P3
R795 T1118 T1116 equivalentTo Foxp3,forkhead box P3