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PMC:2806624 / 15277-15554 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T30427 0-4 NN denotes Bars
T30428 5-9 VB denotes show
T30429 10-14 JJ denotes mean
T30430 15-16 JJ denotes ±
T30431 17-19 NN denotes SE
T30432 20-22 IN denotes of
T30433 23-28 CD denotes three
T30434 29-40 JJ denotes independent
T30435 41-53 NN denotes experiments.
T30436 54-55 -LRB- denotes (
T30437 55-56 NN denotes C
T30438 56-57 -RRB- denotes )
T30439 58-67 NN denotes Chromatin
T30440 68-87 NN denotes immunoprecipitation
T30441 88-93 NN denotes assay
T30442 94-101 NN denotes results
T30443 102-106 VB denotes show
T30444 107-114 NN denotes binding
T30445 115-117 IN denotes of
T30446 118-123 NN denotes RUNX1
T30447 124-127 CC denotes and
T30448 128-133 NN denotes RUNX3
T30449 134-143 NN denotes complexes
T30450 144-154 VB denotes containing
T30451 155-159 NN denotes CBFβ
T30452 160-162 TO denotes to
T30453 163-166 DT denotes the
T30454 167-172 JJ denotes human
T30455 173-178 NN denotes FOXP3
T30456 179-187 NN denotes promoter
T30457 188-190 IN denotes in
T30458 191-196 JJ denotes naive
T30459 197-201 JJ denotes CD4+
T30460 202-203 NN denotes T
T30461 204-209 NN denotes cells
T30462 210-214 WDT denotes that
T30463 215-219 VB denotes were
T30464 220-228 VB denotes cultured
T30465 229-233 IN denotes with
T30466 234-238 NN denotes IL-2
T30467 239-247 RB denotes together
T30468 248-252 IN denotes with
T30469 253-266 JJ denotes anti-CD2/3/28
T30470 267-270 CC denotes and
T30471 271-276 NN denotes TGF-β
R23452 T30427 T30428 arg1Of Bars,show
R23453 T30431 T30429 arg1Of SE,mean
R23454 T30431 T30430 arg1Of SE,±
R23455 T30431 T30432 arg1Of SE,of
R23456 T30435 T30432 arg2Of experiments.,of
R23457 T30435 T30433 arg1Of experiments.,three
R23458 T30435 T30434 arg1Of experiments.,independent
R23459 T30435 T30436 arg1Of experiments.,(
R23460 T30437 T30436 arg2Of C,(
R23461 T30438 T30436 arg3Of ),(
R23462 T30442 T30431 arg1Of results,SE
R23463 T30442 T30439 arg1Of results,Chromatin
R23464 T30442 T30440 arg1Of results,immunoprecipitation
R23465 T30442 T30441 arg1Of results,assay
R23466 T30442 T30443 arg1Of results,show
R23467 T30443 T30428 arg2Of show,show
R23468 T30444 T30443 arg2Of binding,show
R23469 T30444 T30445 arg1Of binding,of
R23470 T30446 T30447 arg1Of RUNX1,and
R23471 T30448 T30447 arg2Of RUNX3,and
R23472 T30449 T30445 arg2Of complexes,of
R23473 T30449 T30446 arg1Of complexes,RUNX1
R23474 T30449 T30448 arg1Of complexes,RUNX3
R23475 T30449 T30450 arg1Of complexes,containing
R23476 T30451 T30450 arg2Of CBFβ,containing
R23477 T30451 T30452 arg1Of CBFβ,to
R23478 T30456 T30452 arg2Of promoter,to
R23479 T30456 T30453 arg1Of promoter,the
R23480 T30456 T30454 arg1Of promoter,human
R23481 T30456 T30455 arg1Of promoter,FOXP3
R23482 T30456 T30457 arg1Of promoter,in
R23483 T30461 T30457 arg2Of cells,in
R23484 T30461 T30458 arg1Of cells,naive
R23485 T30461 T30459 arg1Of cells,CD4+
R23486 T30461 T30460 arg1Of cells,T
R23487 T30461 T30462 arg1Of cells,that
R23488 T30461 T30463 arg1Of cells,were
R23489 T30461 T30464 arg2Of cells,cultured
R23490 T30464 T30463 arg2Of cultured,were
R23491 T30464 T30465 arg1Of cultured,with
R23492 T30464 T30467 arg1Of cultured,together
R23493 T30466 T30465 arg2Of IL-2,with
R23494 T30467 T30468 arg1Of together,with
R23495 T30469 T30470 arg1Of anti-CD2/3/28,and
R23496 T30470 T30468 arg2Of and,with
R23497 T30471 T30470 arg2Of TGF-β,and

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T30690 0-4 NNS denotes Bars
T30691 5-9 VBP denotes show
T30692 10-14 JJ denotes mean
T30693 15-16 NN denotes ±
T30694 17-19 NNP denotes SE
T30695 20-22 IN denotes of
T30696 23-28 CD denotes three
T30697 29-40 JJ denotes independent
T30698 41-52 NNS denotes experiments
T30699 52-53 . denotes .
T30700 54-55 -LRB- denotes (
T30701 55-56 NNP denotes C
T30702 56-57 -RRB- denotes )
T30703 58-67 NNP denotes Chromatin
T30704 68-87 NN denotes immunoprecipitation
T30705 88-93 NN denotes assay
T30706 94-101 NNS denotes results
T30707 102-106 VBP denotes show
T30708 107-114 JJ denotes binding
T30709 115-117 IN denotes of
T30710 118-123 NNP denotes RUNX1
T30711 124-127 CC denotes and
T30712 128-133 NNP denotes RUNX3
T30713 134-143 NNS denotes complexes
T30714 144-154 VBG denotes containing
T30715 155-159 NNP denotes CBFβ
T30716 160-162 TO denotes to
T30717 163-166 DT denotes the
T30718 167-172 JJ denotes human
T30719 173-178 CD denotes FOXP3
T30720 179-187 NN denotes promoter
T30721 188-190 IN denotes in
T30722 191-196 JJ denotes naive
T30723 197-200 NNP denotes CD4
T30724 200-201 CD denotes +
T30725 202-203 NNP denotes T
T30726 204-209 NNS denotes cells
T30727 210-214 WDT denotes that
T30728 215-219 VBD denotes were
T30729 220-228 VBN denotes cultured
T30730 229-233 IN denotes with
T30731 234-238 JJ denotes IL-2
T30732 239-247 RB denotes together
T30733 248-252 IN denotes with
T30734 253-261 JJ denotes anti-CD2
T30735 261-262 NN denotes /
T30736 262-266 CD denotes 3/28
T30737 267-270 CC denotes and
T30738 271-276 NNP denotes TGF-β
T30739 276-277 . denotes .
R23687 T30690 T30691 nsubj Bars,show
R23688 T30691 T30691 ROOT show,show
R23689 T30692 T30694 amod mean,SE
R23690 T30693 T30694 compound ±,SE
R23691 T30694 T30691 dobj SE,show
R23692 T30695 T30694 prep of,SE
R23693 T30696 T30698 nummod three,experiments
R23694 T30697 T30698 amod independent,experiments
R23695 T30698 T30695 pobj experiments,of
R23696 T30699 T30691 punct .,show
R23697 T30700 T30701 punct (,C
R23698 T30701 T30701 ROOT C,C
R23699 T30702 T30701 punct ),C
R23700 T30703 T30706 amod Chromatin,results
R23701 T30704 T30706 compound immunoprecipitation,results
R23702 T30705 T30706 compound assay,results
R23703 T30706 T30707 nsubj results,show
R23704 T30707 T30707 ROOT show,show
R23705 T30708 T30713 amod binding,complexes
R23706 T30709 T30708 prep of,binding
R23707 T30710 T30709 pobj RUNX1,of
R23708 T30711 T30710 cc and,RUNX1
R23709 T30712 T30710 conj RUNX3,RUNX1
R23710 T30713 T30707 dobj complexes,show
R23711 T30714 T30713 acl containing,complexes
R23712 T30715 T30714 dobj CBFβ,containing
R23713 T30716 T30714 prep to,containing
R23714 T30717 T30720 det the,promoter
R23715 T30718 T30720 amod human,promoter
R23716 T30719 T30720 nummod FOXP3,promoter
R23717 T30720 T30716 pobj promoter,to
R23718 T30721 T30720 prep in,promoter
R23719 T30722 T30726 amod naive,cells
R23720 T30723 T30726 compound CD4,cells
R23721 T30724 T30726 nummod +,cells
R23722 T30725 T30726 compound T,cells
R23723 T30726 T30721 pobj cells,in
R23724 T30727 T30729 nsubjpass that,cultured
R23725 T30728 T30729 auxpass were,cultured
R23726 T30729 T30726 relcl cultured,cells
R23727 T30730 T30729 prep with,cultured
R23728 T30731 T30730 pobj IL-2,with
R23729 T30732 T30733 advmod together,with
R23730 T30733 T30731 prep with,IL-2
R23731 T30734 T30735 compound anti-CD2,/
R23732 T30735 T30733 pobj /,with
R23733 T30736 T30735 nummod 3/28,/
R23734 T30737 T30735 cc and,/
R23735 T30738 T30735 conj TGF-β,/
R23736 T30739 T30707 punct .,show

GO-MF

Id Subject Object Predicate Lexical cue
T30802 107-114 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T30805 234-238 http://purl.obolibrary.org/obo/GO_0005134 denotes IL-2

GO-CC

Id Subject Object Predicate Lexical cue
T30807 204-209 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T30812 58-67 http://purl.obolibrary.org/obo/GO_0000785 denotes Chromatin

sentences

Id Subject Object Predicate Lexical cue
T30293 0-277 Sentence denotes Bars show mean ± SE of three independent experiments. (C) Chromatin immunoprecipitation assay results show binding of RUNX1 and RUNX3 complexes containing CBFβ to the human FOXP3 promoter in naive CD4+ T cells that were cultured with IL-2 together with anti-CD2/3/28 and TGF-β.
T105 0-277 Sentence denotes Bars show mean ± SE of three independent experiments. (C) Chromatin immunoprecipitation assay results show binding of RUNX1 and RUNX3 complexes containing CBFβ to the human FOXP3 promoter in naive CD4+ T cells that were cultured with IL-2 together with anti-CD2/3/28 and TGF-β.

events-check-again

Id Subject Object Predicate Lexical cue
T30892 107-114 Binding denotes binding
T30893 107-114 Binding denotes binding
T30894 107-114 Binding denotes binding
T30895 118-123 Protein denotes RUNX1
T30896 128-133 Protein denotes RUNX3
T30897 155-159 Protein denotes CBFβ
T30898 173-178 Protein denotes FOXP3
T30899 179-187 Entity denotes promoter
T30900 197-200 Protein denotes CD4
T30901 234-238 Protein denotes IL-2
T30902 258-261 Protein denotes CD2
T30903 262-263 Protein denotes 3
T30904 264-266 Protein denotes 28
T30905 271-276 Protein denotes TGF-β
R23842 T30895 T30893 themeOf RUNX1,binding
R23843 T30896 T30892 themeOf RUNX3,binding
R23844 T30897 T30894 themeOf CBFβ,binding
R23845 T30899 T30892 themeOf promoter,binding
R23846 T30899 T30894 themeOf promoter,binding
R23847 T30899 T30893 themeOf promoter,binding
R23848 T30899 T30898 partOf promoter,FOXP3

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T30848 118-123 Protein denotes RUNX1
T30849 128-143 Protein denotes RUNX3 complexes
T30850 155-159 Protein denotes CBFβ
T30851 167-187 Protein denotes human FOXP3 promoter
T30852 197-201 Protein denotes CD4+
T30853 271-276 Protein denotes TGF-β
T30854 107-114 Binding denotes binding
T30855 107-114 Binding denotes binding
T30856 144-154 Gene_expression denotes containing
T30857 144-154 Gene_expression denotes containing
T30858 144-154 Gene_expression denotes containing
R23818 T30848 T30854 themeOf RUNX1,binding
R23819 T30848 T30856 themeOf RUNX1,containing
R23820 T30849 T30855 themeOf RUNX3 complexes,binding
R23821 T30849 T30857 themeOf RUNX3 complexes,containing
R23822 T30850 T30858 themeOf CBFβ,containing
R23823 T30851 T30854 themeOf human FOXP3 promoter,binding
R23824 T30851 T30855 themeOf human FOXP3 promoter,binding

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T30273 107-114 Binding denotes binding
T30274 107-114 Binding denotes binding
T30275 107-114 Binding denotes binding
T30276 118-123 Protein denotes RUNX1
T30277 128-133 Protein denotes RUNX3
T30278 155-159 Protein denotes CBFβ
T30279 173-178 Protein denotes FOXP3
T30280 179-187 Entity denotes promoter
T30281 197-200 Protein denotes CD4
T30282 234-238 Protein denotes IL-2
T30283 258-261 Protein denotes CD2
T30284 262-263 Protein denotes 3
T30285 264-266 Protein denotes 28
T30286 271-276 Protein denotes TGF-β
R23310 T30276 T30274 themeOf RUNX1,binding
R23311 T30277 T30273 themeOf RUNX3,binding
R23312 T30278 T30275 themeOf CBFβ,binding
R23313 T30280 T30273 themeOf promoter,binding
R23314 T30280 T30275 themeOf promoter,binding
R23315 T30280 T30274 themeOf promoter,binding
R23316 T30280 T30279 partOf promoter,FOXP3

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T30533 118-123 Q01196 denotes RUNX1
T30534 128-133 Q13761 denotes RUNX3
T30535 155-159 Q13951 denotes CBFβ
T30536 173-178 Q9BZS1 denotes FOXP3
T30537 197-200 P01730 denotes CD4
T30538 234-238 P60568 denotes IL-2
T30539 258-261 P06729 denotes CD2
T30540 271-276 P01137 denotes TGF-β

test2

Id Subject Object Predicate Lexical cue
T30252 107-114 Binding denotes binding
T30253 118-123 Protein denotes RUNX1
T30254 128-133 Protein denotes RUNX3
T30255 155-159 Protein denotes CBFβ
T30256 173-178 Protein denotes FOXP3
T30257 179-187 Entity denotes promoter
T30258 197-200 Protein denotes CD4
T30259 234-238 Protein denotes IL-2
T30260 258-261 Protein denotes CD2
T30261 262-263 Protein denotes 3
T30262 264-266 Protein denotes 28
T30263 271-276 Protein denotes TGF-β
R23300 T30253 T30252 themeOf RUNX1,binding
R23301 T30254 T30252 themeOf RUNX3,binding
R23302 T30255 T30252 themeOf CBFβ,binding
R23303 T30257 T30256 partOf promoter,FOXP3
R23304 T30257 T30252 themeOf promoter,binding