PMC:2806624 / 12260-12382
Annnotations
pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T6141","span":{"begin":0,"end":2},"obj":"TO"},{"id":"T6142","span":{"begin":3,"end":9},"obj":"VB"},{"id":"T6143","span":{"begin":10,"end":13},"obj":"DT"},{"id":"T6144","span":{"begin":14,"end":22},"obj":"JJ"},{"id":"T6145","span":{"begin":23,"end":30},"obj":"VB"},{"id":"T6146","span":{"begin":31,"end":36},"obj":"NN"},{"id":"T6147","span":{"begin":37,"end":39},"obj":"IN"},{"id":"T6148","span":{"begin":40,"end":43},"obj":"DT"},{"id":"T6149","span":{"begin":44,"end":49},"obj":"NN"},{"id":"T6150","span":{"begin":50,"end":58},"obj":"NN"},{"id":"T6151","span":{"begin":58,"end":59},"obj":"-COMMA-"},{"id":"T6152","span":{"begin":60,"end":62},"obj":"PRP"},{"id":"T6153","span":{"begin":63,"end":74},"obj":"RB"},{"id":"T6154","span":{"begin":75,"end":86},"obj":"VB"},{"id":"T6155","span":{"begin":87,"end":94},"obj":"NN"},{"id":"T6156","span":{"begin":95,"end":100},"obj":"NN"},{"id":"T6157","span":{"begin":101,"end":105},"obj":"IN"},{"id":"T6158","span":{"begin":106,"end":111},"obj":"NN"},{"id":"T6159","span":{"begin":112,"end":115},"obj":"CC"},{"id":"T6160","span":{"begin":116,"end":121},"obj":"NN"}],"relations":[{"id":"R4876","pred":"arg1Of","subj":"T6142","obj":"T6141"},{"id":"R4877","pred":"arg2Of","subj":"T6146","obj":"T6142"},{"id":"R4878","pred":"arg1Of","subj":"T6146","obj":"T6143"},{"id":"R4879","pred":"arg1Of","subj":"T6146","obj":"T6144"},{"id":"R4880","pred":"arg1Of","subj":"T6146","obj":"T6145"},{"id":"R4881","pred":"arg1Of","subj":"T6146","obj":"T6147"},{"id":"R4882","pred":"arg2Of","subj":"T6150","obj":"T6147"},{"id":"R4883","pred":"arg1Of","subj":"T6150","obj":"T6148"},{"id":"R4884","pred":"arg1Of","subj":"T6150","obj":"T6149"},{"id":"R4885","pred":"arg1Of","subj":"T6152","obj":"T6142"},{"id":"R4886","pred":"arg1Of","subj":"T6152","obj":"T6154"},{"id":"R4887","pred":"modOf","subj":"T6154","obj":"T6141"},{"id":"R4888","pred":"arg1Of","subj":"T6154","obj":"T6151"},{"id":"R4889","pred":"arg1Of","subj":"T6154","obj":"T6153"},{"id":"R4890","pred":"arg1Of","subj":"T6154","obj":"T6157"},{"id":"R4891","pred":"arg2Of","subj":"T6156","obj":"T6154"},{"id":"R4892","pred":"arg1Of","subj":"T6156","obj":"T6155"},{"id":"R4893","pred":"arg1Of","subj":"T6158","obj":"T6159"},{"id":"R4894","pred":"arg2Of","subj":"T6159","obj":"T6157"},{"id":"R4895","pred":"arg2Of","subj":"T6160","obj":"T6159"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"To verify the putative binding sites in the FOXP3 promoter, we transiently transfected HEK293T cells with RUNX1 and RUNX3."}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T6612","span":{"begin":0,"end":2},"obj":"TO"},{"id":"T6613","span":{"begin":3,"end":9},"obj":"VB"},{"id":"T6614","span":{"begin":10,"end":13},"obj":"DT"},{"id":"T6615","span":{"begin":14,"end":22},"obj":"JJ"},{"id":"T6616","span":{"begin":23,"end":30},"obj":"JJ"},{"id":"T6617","span":{"begin":31,"end":36},"obj":"NNS"},{"id":"T6618","span":{"begin":37,"end":39},"obj":"IN"},{"id":"T6619","span":{"begin":40,"end":43},"obj":"DT"},{"id":"T6620","span":{"begin":44,"end":49},"obj":"CD"},{"id":"T6621","span":{"begin":50,"end":58},"obj":"NN"},{"id":"T6622","span":{"begin":58,"end":59},"obj":","},{"id":"T6623","span":{"begin":60,"end":62},"obj":"PRP"},{"id":"T6624","span":{"begin":63,"end":74},"obj":"RB"},{"id":"T6625","span":{"begin":75,"end":86},"obj":"VBD"},{"id":"T6626","span":{"begin":87,"end":94},"obj":"CD"},{"id":"T6627","span":{"begin":95,"end":100},"obj":"NNS"},{"id":"T6628","span":{"begin":101,"end":105},"obj":"IN"},{"id":"T6629","span":{"begin":106,"end":111},"obj":"NNP"},{"id":"T6630","span":{"begin":112,"end":115},"obj":"CC"},{"id":"T6631","span":{"begin":116,"end":121},"obj":"NNP"},{"id":"T6632","span":{"begin":121,"end":122},"obj":"."}],"relations":[{"id":"R5294","pred":"aux","subj":"T6612","obj":"T6613"},{"id":"R5295","pred":"advcl","subj":"T6613","obj":"T6625"},{"id":"R5296","pred":"det","subj":"T6614","obj":"T6617"},{"id":"R5297","pred":"amod","subj":"T6615","obj":"T6617"},{"id":"R5298","pred":"amod","subj":"T6616","obj":"T6617"},{"id":"R5299","pred":"dobj","subj":"T6617","obj":"T6613"},{"id":"R5300","pred":"prep","subj":"T6618","obj":"T6617"},{"id":"R5301","pred":"det","subj":"T6619","obj":"T6621"},{"id":"R5302","pred":"nummod","subj":"T6620","obj":"T6621"},{"id":"R5303","pred":"pobj","subj":"T6621","obj":"T6618"},{"id":"R5304","pred":"punct","subj":"T6622","obj":"T6625"},{"id":"R5305","pred":"nsubj","subj":"T6623","obj":"T6625"},{"id":"R5306","pred":"advmod","subj":"T6624","obj":"T6625"},{"id":"R5307","pred":"ROOT","subj":"T6625","obj":"T6625"},{"id":"R5308","pred":"nummod","subj":"T6626","obj":"T6627"},{"id":"R5309","pred":"dobj","subj":"T6627","obj":"T6625"},{"id":"R5310","pred":"prep","subj":"T6628","obj":"T6625"},{"id":"R5311","pred":"pobj","subj":"T6629","obj":"T6628"},{"id":"R5312","pred":"cc","subj":"T6630","obj":"T6629"},{"id":"R5313","pred":"conj","subj":"T6631","obj":"T6629"},{"id":"R5314","pred":"punct","subj":"T6632","obj":"T6625"}],"text":"To verify the putative binding sites in the FOXP3 promoter, we transiently transfected HEK293T cells with RUNX1 and RUNX3."}
GO-MF
{"project":"GO-MF","denotations":[{"id":"T7065","span":{"begin":23,"end":30},"obj":"http://purl.obolibrary.org/obo/GO_0005488"}],"text":"To verify the putative binding sites in the FOXP3 promoter, we transiently transfected HEK293T cells with RUNX1 and RUNX3."}
GO-CC
{"project":"GO-CC","denotations":[{"id":"T7082","span":{"begin":95,"end":100},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"To verify the putative binding sites in the FOXP3 promoter, we transiently transfected HEK293T cells with RUNX1 and RUNX3."}
sentences
{"project":"sentences","denotations":[{"id":"T6070","span":{"begin":0,"end":122},"obj":"Sentence"},{"id":"T85","span":{"begin":0,"end":122},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"To verify the putative binding sites in the FOXP3 promoter, we transiently transfected HEK293T cells with RUNX1 and RUNX3."}
events-check-again
{"project":"events-check-again","denotations":[{"id":"T7238","span":{"begin":44,"end":49},"obj":"Protein"},{"id":"T7239","span":{"begin":75,"end":86},"obj":"Gene_expression"},{"id":"T7240","span":{"begin":75,"end":86},"obj":"Gene_expression"},{"id":"T7241","span":{"begin":106,"end":111},"obj":"Protein"},{"id":"T7242","span":{"begin":116,"end":121},"obj":"Protein"}],"relations":[{"id":"R5812","pred":"themeOf","subj":"T7241","obj":"T7240"},{"id":"R5813","pred":"themeOf","subj":"T7242","obj":"T7239"}],"text":"To verify the putative binding sites in the FOXP3 promoter, we transiently transfected HEK293T cells with RUNX1 and RUNX3."}
bionlp-st-ge-2016-reference-tees
{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T7097","span":{"begin":44,"end":58},"obj":"Protein"},{"id":"T7098","span":{"begin":106,"end":111},"obj":"Protein"},{"id":"T7099","span":{"begin":116,"end":121},"obj":"Protein"},{"id":"T7100","span":{"begin":75,"end":86},"obj":"Gene_expression"},{"id":"T7101","span":{"begin":75,"end":86},"obj":"Gene_expression"}],"relations":[{"id":"R5724","pred":"themeOf","subj":"T7098","obj":"T7100"},{"id":"R5725","pred":"themeOf","subj":"T7099","obj":"T7101"}],"text":"To verify the putative binding sites in the FOXP3 promoter, we transiently transfected HEK293T cells with RUNX1 and RUNX3."}
bionlp-st-ge-2016-reference
{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T5994","span":{"begin":44,"end":49},"obj":"Protein"},{"id":"T5995","span":{"begin":75,"end":86},"obj":"Gene_expression"},{"id":"T5996","span":{"begin":75,"end":86},"obj":"Gene_expression"},{"id":"T5997","span":{"begin":106,"end":111},"obj":"Protein"},{"id":"T5998","span":{"begin":116,"end":121},"obj":"Protein"}],"relations":[{"id":"R4766","pred":"themeOf","subj":"T5997","obj":"T5996"},{"id":"R4767","pred":"themeOf","subj":"T5998","obj":"T5995"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"To verify the putative binding sites in the FOXP3 promoter, we transiently transfected HEK293T cells with RUNX1 and RUNX3."}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T6496","span":{"begin":44,"end":49},"obj":"Q9BZS1"},{"id":"T6497","span":{"begin":106,"end":111},"obj":"Q01196"},{"id":"T6498","span":{"begin":116,"end":121},"obj":"Q13761"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"To verify the putative binding sites in the FOXP3 promoter, we transiently transfected HEK293T cells with RUNX1 and RUNX3."}
test2
{"project":"test2","denotations":[{"id":"T5933","span":{"begin":23,"end":36},"obj":"Entity"},{"id":"T5934","span":{"begin":44,"end":49},"obj":"Protein"},{"id":"T5935","span":{"begin":106,"end":111},"obj":"Protein"},{"id":"T5936","span":{"begin":116,"end":121},"obj":"Protein"}],"relations":[{"id":"R4731","pred":"partOf","subj":"T5933","obj":"T5934"}],"attributes":[{"id":"M192","pred":"Speculation","subj":"T5933","obj":"true"}],"text":"To verify the putative binding sites in the FOXP3 promoter, we transiently transfected HEK293T cells with RUNX1 and RUNX3."}