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PMC:2806624 / 11997-12180 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T6091 0-13 NN denotes Transcription
T6092 14-21 NN denotes element
T6093 22-28 NN denotes search
T6094 29-35 NN denotes system
T6095 36-44 NN denotes analysis
T6096 45-47 IN denotes of
T6097 48-51 DT denotes the
T6098 52-57 JJ denotes human
T6099 58-63 NN denotes FOXP3
T6100 64-72 NN denotes promoter
T6101 73-82 VB denotes predicted
T6102 83-84 CD denotes 3
T6103 85-93 JJ denotes putative
T6104 94-98 NN denotes RUNX
T6105 99-106 NN denotes binding
T6106 107-112 NN denotes sites
T6107 113-115 IN denotes at
T6108 116-119 CD denotes 333
T6109 119-120 -COMMA- denotes ,
T6110 121-124 CD denotes 287
T6111 124-125 -COMMA- denotes ,
T6112 126-129 CC denotes and
T6113 130-132 CD denotes 53
T6114 133-135 NN denotes bp
T6115 136-144 RB denotes upstream
T6116 145-147 IN denotes of
T6117 148-151 DT denotes the
T6118 152-165 NN denotes transcription
T6119 166-171 NN denotes start
T6120 172-176 NN denotes site
T6121 177-178 -LRB- denotes (
T6122 178-181 NN denotes TSS
T6123 181-182 -RRB- denotes )
R4827 T6095 T6091 arg1Of analysis,Transcription
R4828 T6095 T6092 arg1Of analysis,element
R4829 T6095 T6093 arg1Of analysis,search
R4830 T6095 T6094 arg1Of analysis,system
R4831 T6095 T6096 arg1Of analysis,of
R4832 T6095 T6101 arg1Of analysis,predicted
R4833 T6100 T6096 arg2Of promoter,of
R4834 T6100 T6097 arg1Of promoter,the
R4835 T6100 T6098 arg1Of promoter,human
R4836 T6100 T6099 arg1Of promoter,FOXP3
R4837 T6101 T6107 arg1Of predicted,at
R4838 T6106 T6101 arg2Of sites,predicted
R4839 T6106 T6102 arg1Of sites,3
R4840 T6106 T6103 arg1Of sites,putative
R4841 T6106 T6104 arg1Of sites,RUNX
R4842 T6106 T6105 arg1Of sites,binding
R4843 T6108 T6109 arg1Of 333,","
R4844 T6109 T6112 arg1Of ",",and
R4845 T6110 T6109 arg2Of 287,","
R4846 T6112 T6107 arg2Of and,at
R4847 T6112 T6111 arg1Of and,","
R4848 T6112 T6115 arg1Of and,upstream
R4849 T6114 T6112 arg2Of bp,and
R4850 T6114 T6113 arg1Of bp,53
R4851 T6115 T6116 arg1Of upstream,of
R4852 T6120 T6116 arg2Of site,of
R4853 T6120 T6117 arg1Of site,the
R4854 T6120 T6118 arg1Of site,transcription
R4855 T6120 T6119 arg1Of site,start
R4856 T6120 T6121 arg1Of site,(
R4857 T6122 T6121 arg2Of TSS,(
R4858 T6123 T6121 arg3Of ),(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T6559 0-13 NNP denotes Transcription
T6560 14-21 NN denotes element
T6561 22-28 NN denotes search
T6562 29-35 NN denotes system
T6563 36-44 NN denotes analysis
T6564 45-47 IN denotes of
T6565 48-51 DT denotes the
T6566 52-57 JJ denotes human
T6567 58-63 CD denotes FOXP3
T6568 64-72 NN denotes promoter
T6569 73-82 VBD denotes predicted
T6570 83-84 CD denotes 3
T6571 85-93 JJ denotes putative
T6572 94-98 NNP denotes RUNX
T6573 99-106 JJ denotes binding
T6574 107-112 NNS denotes sites
T6575 113-115 IN denotes at
T6576 116-119 CD denotes 333
T6577 119-120 , denotes ,
T6578 121-124 CD denotes 287
T6579 124-125 , denotes ,
T6580 126-129 CC denotes and
T6581 130-132 CD denotes 53
T6582 133-135 NN denotes bp
T6583 136-144 RB denotes upstream
T6584 145-147 IN denotes of
T6585 148-151 DT denotes the
T6586 152-165 NN denotes transcription
T6587 166-171 VB denotes start
T6588 172-176 NN denotes site
T6589 177-178 -LRB- denotes (
T6590 178-181 NNP denotes TSS
T6591 181-182 -RRB- denotes )
T6592 182-183 . denotes .
R5241 T6559 T6562 compound Transcription,system
R5242 T6560 T6562 compound element,system
R5243 T6561 T6562 compound search,system
R5244 T6562 T6563 compound system,analysis
R5246 T6564 T6563 prep of,analysis
R5247 T6565 T6568 det the,promoter
R5248 T6566 T6568 amod human,promoter
R5249 T6567 T6568 nummod FOXP3,promoter
R5250 T6568 T6564 pobj promoter,of
R5251 T6569 T6569 ROOT predicted,predicted
R5252 T6570 T6574 nummod 3,sites
R5253 T6571 T6574 amod putative,sites
R5254 T6572 T6574 nmod RUNX,sites
R5255 T6573 T6574 amod binding,sites
R5256 T6574 T6569 dobj sites,predicted
R5257 T6575 T6574 prep at,sites
R5258 T6576 T6575 pobj 333,at
R5259 T6577 T6574 punct ",",sites
R5260 T6578 T6574 appos 287,sites
R5261 T6579 T6574 punct ",",sites
R5262 T6580 T6574 cc and,sites
R5263 T6581 T6583 nummod 53,upstream
R5264 T6582 T6583 compound bp,upstream
R5265 T6583 T6574 conj upstream,sites
R5266 T6584 T6583 prep of,upstream
R5267 T6585 T6586 det the,transcription
R5268 T6586 T6584 pobj transcription,of
R5269 T6587 T6569 conj start,predicted
R5270 T6588 T6587 dobj site,start
R5271 T6589 T6590 punct (,TSS
R5272 T6590 T6587 dep TSS,start
R5273 T6591 T6587 punct ),start
R5274 T6592 T6569 punct .,predicted

GO-BP

Id Subject Object Predicate Lexical cue
T7061 0-13 http://purl.obolibrary.org/obo/GO_0006351 denotes Transcription
T7062 152-165 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription

GO-MF

Id Subject Object Predicate Lexical cue
T7063 99-106 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

sentences

Id Subject Object Predicate Lexical cue
T6068 0-183 Sentence denotes Transcription element search system analysis of the human FOXP3 promoter predicted 3 putative RUNX binding sites at 333, 287, and 53 bp upstream of the transcription start site (TSS).
T83 0-183 Sentence denotes Transcription element search system analysis of the human FOXP3 promoter predicted 3 putative RUNX binding sites at 333, 287, and 53 bp upstream of the transcription start site (TSS).

events-check-again

Id Subject Object Predicate Lexical cue
T7237 58-63 Protein denotes FOXP3

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T7096 52-72 Protein denotes human FOXP3 promoter

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T5993 58-63 Protein denotes FOXP3

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T6492 58-63 Q9BZS1 denotes FOXP3
T6493 94-98 Q01196 denotes RUNX
T6494 94-98 Q13950 denotes RUNX
T6495 94-98 Q13761 denotes RUNX

test2

Id Subject Object Predicate Lexical cue Speculation
T5932 58-63 Protein denotes FOXP3 true