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PMC:2806624 / 1173-1413 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T405 1-5 JJ denotes CD4+
T406 6-14 NN denotes CD25high
T407 15-21 NN denotes CD127−
T408 22-23 NN denotes T
T409 24-27 NN denotes reg
T410 28-33 NN denotes cells
T411 34-47 RB denotes significantly
T412 48-57 VB denotes expressed
T413 58-64 JJ denotes higher
T414 65-71 NN denotes levels
T415 72-74 IN denotes of
T416 75-80 NN denotes RUNX3
T417 80-81 -COMMA- denotes ,
T418 82-87 NN denotes FOXP3
T419 87-88 -COMMA- denotes ,
T420 89-92 CC denotes and
T421 93-98 NN denotes TGF-β
T422 99-103 NN denotes mRNA
T423 104-112 VB denotes compared
T424 113-117 IN denotes with
T425 118-127 NN denotes CD4+CD25−
T426 128-133 NN denotes cells
T427 135-146 RB denotes Furthermore
T428 146-147 -COMMA- denotes ,
T429 148-153 NN denotes FOXP3
T430 154-157 CC denotes and
T431 158-163 NN denotes RUNX3
T432 164-168 VB denotes were
T433 169-180 VB denotes colocalized
T434 181-183 IN denotes in
T435 184-189 JJ denotes human
T436 190-196 NN denotes tonsil
T437 197-198 NN denotes T
T438 199-202 NN denotes reg
T439 203-208 NN denotes cells
T440 210-215 DT denotes These
T441 216-220 NN denotes data
T442 221-232 VB denotes demonstrate
T443 233-237 NN denotes Runx
R262 T410 T405 arg1Of cells,CD4+
R263 T410 T406 arg1Of cells,CD25high
R264 T410 T407 arg1Of cells,CD127−
R265 T410 T408 arg1Of cells,T
R266 T410 T409 arg1Of cells,reg
R267 T410 T412 arg1Of cells,expressed
R268 T412 T411 arg1Of expressed,significantly
R269 T414 T412 arg2Of levels,expressed
R270 T414 T413 arg1Of levels,higher
R271 T414 T415 arg1Of levels,of
R272 T416 T417 arg1Of RUNX3,","
R273 T417 T420 arg1Of ",",and
R274 T418 T417 arg2Of FOXP3,","
R275 T420 T415 arg2Of and,of
R276 T420 T419 arg1Of and,","
R277 T420 T423 arg1Of and,compared
R278 T422 T420 arg2Of mRNA,and
R279 T422 T421 arg1Of mRNA,TGF-β
R280 T424 T423 arg2Of with,compared
R281 T426 T424 arg2Of cells,with
R282 T426 T425 arg1Of cells,CD4+CD25−
R283 T429 T430 arg1Of FOXP3,and
R284 T430 T432 arg1Of and,were
R285 T430 T433 arg2Of and,colocalized
R286 T431 T430 arg2Of RUNX3,and
R287 T433 T427 arg1Of colocalized,Furthermore
R288 T433 T428 arg1Of colocalized,","
R289 T433 T432 arg2Of colocalized,were
R290 T433 T434 arg1Of colocalized,in
R291 T439 T434 arg2Of cells,in
R292 T439 T435 arg1Of cells,human
R293 T439 T436 arg1Of cells,tonsil
R294 T439 T437 arg1Of cells,T
R295 T439 T438 arg1Of cells,reg
R296 T441 T440 arg1Of data,These
R297 T441 T442 arg1Of data,demonstrate

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T723 1-4 NNP denotes CD4
T724 4-5 NNP denotes +
T725 6-14 NNP denotes CD25high
T726 15-20 NNP denotes CD127
T727 20-21 VBD denotes −
T728 22-23 NNP denotes T
T729 24-27 NN denotes reg
T730 28-33 NNS denotes cells
T731 34-47 RB denotes significantly
T732 48-57 VBD denotes expressed
T733 58-64 JJR denotes higher
T734 65-71 NNS denotes levels
T735 72-74 IN denotes of
T736 75-80 NNP denotes RUNX3
T737 80-81 , denotes ,
T738 82-87 NNP denotes FOXP3
T739 87-88 , denotes ,
T740 89-92 CC denotes and
T741 93-98 NNP denotes TGF-β
T742 99-103 NNP denotes mRNA
T743 104-112 VBN denotes compared
T744 113-117 IN denotes with
T745 118-121 CD denotes CD4
T746 121-122 CD denotes +
T747 122-126 NNS denotes CD25
T748 126-127 VBP denotes −
T749 128-133 NNS denotes cells
T750 133-134 . denotes .
T751 135-146 RB denotes Furthermore
T752 146-147 , denotes ,
T753 148-153 CD denotes FOXP3
T754 154-157 CC denotes and
T755 158-163 CD denotes RUNX3
T756 164-168 VBD denotes were
T757 169-180 VBN denotes colocalized
T758 181-183 IN denotes in
T759 184-189 JJ denotes human
T760 190-196 NN denotes tonsil
T761 197-198 NNP denotes T
T762 199-202 NN denotes reg
T763 203-208 NNS denotes cells
T764 208-209 . denotes .
T765 210-215 DT denotes These
T766 216-220 NNS denotes data
T767 221-232 VBP denotes demonstrate
T768 233-237 NNP denotes Runx
R518 T723 T724 compound CD4,+
R519 T724 T726 compound +,CD127
R520 T725 T726 compound CD25high,CD127
R521 T726 T727 nsubj CD127,−
R522 T727 T732 dep −,expressed
R523 T728 T730 compound T,cells
R524 T729 T730 compound reg,cells
R525 T730 T727 dobj cells,−
R526 T731 T732 advmod significantly,expressed
R527 T732 T732 ROOT expressed,expressed
R528 T733 T734 amod higher,levels
R529 T734 T732 dobj levels,expressed
R530 T735 T734 prep of,levels
R531 T736 T735 pobj RUNX3,of
R532 T737 T736 punct ",",RUNX3
R533 T738 T736 conj FOXP3,RUNX3
R534 T739 T738 punct ",",FOXP3
R535 T740 T738 cc and,FOXP3
R536 T741 T742 compound TGF-β,mRNA
R537 T742 T738 conj mRNA,FOXP3
R538 T743 T732 prep compared,expressed
R539 T744 T743 prep with,compared
R540 T745 T748 punct CD4,−
R541 T746 T747 nummod +,CD25
R542 T747 T748 nsubj CD25,−
R543 T748 T749 amod −,cells
R544 T749 T744 pobj cells,with
R545 T750 T732 punct .,expressed
R546 T751 T757 advmod Furthermore,colocalized
R547 T752 T757 punct ",",colocalized
R548 T753 T757 nsubjpass FOXP3,colocalized
R549 T754 T753 cc and,FOXP3
R550 T755 T753 conj RUNX3,FOXP3
R551 T756 T757 auxpass were,colocalized
R552 T757 T757 ROOT colocalized,colocalized
R553 T758 T757 prep in,colocalized
R554 T759 T760 amod human,tonsil
R555 T760 T761 compound tonsil,T
R556 T761 T763 compound T,cells
R557 T762 T763 compound reg,cells
R558 T763 T758 pobj cells,in
R559 T764 T757 punct .,colocalized
R560 T765 T766 det These,data
R561 T766 T767 nsubj data,demonstrate
R562 T767 T767 ROOT demonstrate,demonstrate

UBERON-AE

Id Subject Object Predicate Lexical cue
T137 190-196 http://purl.obolibrary.org/obo/UBERON_0002372 denotes tonsil

GO-CC

Id Subject Object Predicate Lexical cue
T881 28-33 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T882 128-133 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T883 203-208 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T146 135-209 Sentence denotes Furthermore, FOXP3 and RUNX3 were colocalized in human tonsil T reg cells.
T10 135-209 Sentence denotes Furthermore, FOXP3 and RUNX3 were colocalized in human tonsil T reg cells.

events-check-again

Id Subject Object Predicate Lexical cue
T1012 1-4 Protein denotes CD4
T1013 6-10 Protein denotes CD25
T1014 15-20 Protein denotes CD127
T1015 48-57 Transcription denotes expressed
T1016 48-57 Transcription denotes expressed
T1017 48-57 Transcription denotes expressed
T1018 75-80 Protein denotes RUNX3
T1019 82-87 Protein denotes FOXP3
T1020 93-98 Protein denotes TGF-β
T1021 118-121 Protein denotes CD4
T1022 122-126 Protein denotes CD25
T1023 148-153 Protein denotes FOXP3
T1024 158-163 Protein denotes RUNX3
T1025 169-180 Localization denotes colocalized
T1026 169-180 Localization denotes colocalized
T1027 197-208 Entity denotes T reg cells
T1028 233-237 Protein denotes Runx
R697 T1018 T1015 themeOf RUNX3,expressed
R698 T1019 T1016 themeOf FOXP3,expressed
R699 T1020 T1017 themeOf TGF-β,expressed
R700 T1023 T1025 themeOf FOXP3,colocalized
R701 T1024 T1026 themeOf RUNX3,colocalized
R702 T1027 T1025 locationOf T reg cells,colocalized
R703 T1027 T1026 locationOf T reg cells,colocalized

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T160 48-57 Transcription denotes expressed
T161 48-57 Transcription denotes expressed
T162 48-57 Transcription denotes expressed
T163 169-180 Localization denotes colocalized
T164 169-180 Localization denotes colocalized
T205 82-87 Protein denotes FOXP3
T206 93-98 Protein denotes TGF-β
T207 118-121 Protein denotes CD4
T209 122-126 Protein denotes CD25
T210 148-153 Protein denotes FOXP3
T211 158-163 Protein denotes RUNX3
T212 233-237 Protein denotes Runx
T216 197-208 Entity denotes T reg cells
T201 1-4 Protein denotes CD4
T202 6-10 Protein denotes CD25
T203 15-20 Protein denotes CD127
T204 75-80 Protein denotes RUNX3
R67 T205 T161 themeOf FOXP3,expressed
R68 T206 T162 themeOf TGF-β,expressed
R69 T210 T163 themeOf FOXP3,colocalized
R70 T211 T164 themeOf RUNX3,colocalized
R77 T216 T163 locationOf T reg cells,colocalized
R78 T216 T164 locationOf T reg cells,colocalized
R741 T204 T160 themeOf RUNX3,expressed

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T497 1-4 P01730 denotes CD4
T498 15-20 P16871 denotes CD127
T499 75-80 Q13761 denotes RUNX3
T500 82-87 Q9BZS1 denotes FOXP3
T501 93-98 P01137 denotes TGF-β
T502 118-121 P01730 denotes CD4
T503 122-126 P01589 denotes CD25
T504 148-153 Q9BZS1 denotes FOXP3
T505 158-163 Q13761 denotes RUNX3
T506 233-237 Q13761 denotes Runx
T507 233-237 Q01196 denotes Runx
T508 233-237 Q13950 denotes Runx

test2

Id Subject Object Predicate Lexical cue
T123 48-57 Gene_expression denotes expressed
T124 75-80 Protein denotes RUNX3
T125 82-87 Protein denotes FOXP3
T126 93-98 Protein denotes TGF-β
T127 118-121 Protein denotes CD4
T128 122-126 Protein denotes CD25
T129 148-153 Protein denotes FOXP3
T130 158-163 Protein denotes RUNX3
T131 233-237 Protein denotes Runx
T120 1-4 Protein denotes CD4
T121 6-14 Protein denotes CD25high
T122 15-20 Protein denotes CD127
R43 T124 T123 themeOf RUNX3,expressed
R44 T125 T123 themeOf FOXP3,expressed
R45 T126 T123 themeOf TGF-β,expressed