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PMC:2806624 / 1156-1307 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T403 0-11 VB denotes Circulating
T404 12-17 JJ denotes human
T405 18-22 JJ denotes CD4+
T406 23-31 NN denotes CD25high
T407 32-38 NN denotes CD127−
T408 39-40 NN denotes T
T409 41-44 NN denotes reg
T410 45-50 NN denotes cells
T411 51-64 RB denotes significantly
T412 65-74 VB denotes expressed
T413 75-81 JJ denotes higher
T414 82-88 NN denotes levels
T415 89-91 IN denotes of
T416 92-97 NN denotes RUNX3
T417 97-98 -COMMA- denotes ,
T418 99-104 NN denotes FOXP3
T419 104-105 -COMMA- denotes ,
T420 106-109 CC denotes and
T421 110-115 NN denotes TGF-β
T422 116-120 NN denotes mRNA
T423 121-129 VB denotes compared
T424 130-134 IN denotes with
T425 135-144 NN denotes CD4+CD25−
T426 145-150 NN denotes cells
R260 T410 T403 arg1Of cells,Circulating
R261 T410 T404 arg1Of cells,human
R262 T410 T405 arg1Of cells,CD4+
R263 T410 T406 arg1Of cells,CD25high
R264 T410 T407 arg1Of cells,CD127−
R265 T410 T408 arg1Of cells,T
R266 T410 T409 arg1Of cells,reg
R267 T410 T412 arg1Of cells,expressed
R268 T412 T411 arg1Of expressed,significantly
R269 T414 T412 arg2Of levels,expressed
R270 T414 T413 arg1Of levels,higher
R271 T414 T415 arg1Of levels,of
R272 T416 T417 arg1Of RUNX3,","
R273 T417 T420 arg1Of ",",and
R274 T418 T417 arg2Of FOXP3,","
R275 T420 T415 arg2Of and,of
R276 T420 T419 arg1Of and,","
R277 T420 T423 arg1Of and,compared
R278 T422 T420 arg2Of mRNA,and
R279 T422 T421 arg1Of mRNA,TGF-β
R280 T424 T423 arg2Of with,compared
R281 T426 T424 arg2Of cells,with
R282 T426 T425 arg1Of cells,CD4+CD25−

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T721 0-11 VBG denotes Circulating
T722 12-17 JJ denotes human
T723 18-21 NNP denotes CD4
T724 21-22 NNP denotes +
T725 23-31 NNP denotes CD25high
T726 32-37 NNP denotes CD127
T727 37-38 VBD denotes −
T728 39-40 NNP denotes T
T729 41-44 NN denotes reg
T730 45-50 NNS denotes cells
T731 51-64 RB denotes significantly
T732 65-74 VBD denotes expressed
T733 75-81 JJR denotes higher
T734 82-88 NNS denotes levels
T735 89-91 IN denotes of
T736 92-97 NNP denotes RUNX3
T737 97-98 , denotes ,
T738 99-104 NNP denotes FOXP3
T739 104-105 , denotes ,
T740 106-109 CC denotes and
T741 110-115 NNP denotes TGF-β
T742 116-120 NNP denotes mRNA
T743 121-129 VBN denotes compared
T744 130-134 IN denotes with
T745 135-138 CD denotes CD4
T746 138-139 CD denotes +
T747 139-143 NNS denotes CD25
T748 143-144 VBP denotes −
T749 145-150 NNS denotes cells
T750 150-151 . denotes .
R516 T721 T732 nsubj Circulating,expressed
R517 T722 T726 amod human,CD127
R518 T723 T724 compound CD4,+
R519 T724 T726 compound +,CD127
R520 T725 T726 compound CD25high,CD127
R521 T726 T727 nsubj CD127,−
R522 T727 T732 dep −,expressed
R523 T728 T730 compound T,cells
R524 T729 T730 compound reg,cells
R525 T730 T727 dobj cells,−
R526 T731 T732 advmod significantly,expressed
R527 T732 T732 ROOT expressed,expressed
R528 T733 T734 amod higher,levels
R529 T734 T732 dobj levels,expressed
R530 T735 T734 prep of,levels
R531 T736 T735 pobj RUNX3,of
R532 T737 T736 punct ",",RUNX3
R533 T738 T736 conj FOXP3,RUNX3
R534 T739 T738 punct ",",FOXP3
R535 T740 T738 cc and,FOXP3
R536 T741 T742 compound TGF-β,mRNA
R537 T742 T738 conj mRNA,FOXP3
R538 T743 T732 prep compared,expressed
R539 T744 T743 prep with,compared
R540 T745 T748 punct CD4,−
R541 T746 T747 nummod +,CD25
R542 T747 T748 nsubj CD25,−
R543 T748 T749 amod −,cells
R544 T749 T744 pobj cells,with
R545 T750 T732 punct .,expressed

GO-CC

Id Subject Object Predicate Lexical cue
T881 45-50 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T882 145-150 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T145 0-151 Sentence denotes Circulating human CD4+ CD25high CD127− T reg cells significantly expressed higher levels of RUNX3, FOXP3, and TGF-β mRNA compared with CD4+CD25− cells.
T9 0-151 Sentence denotes Circulating human CD4+ CD25high CD127− T reg cells significantly expressed higher levels of RUNX3, FOXP3, and TGF-β mRNA compared with CD4+CD25− cells.

events-check-again

Id Subject Object Predicate Lexical cue
T1012 18-21 Protein denotes CD4
T1013 23-27 Protein denotes CD25
T1014 32-37 Protein denotes CD127
T1015 65-74 Transcription denotes expressed
T1016 65-74 Transcription denotes expressed
T1017 65-74 Transcription denotes expressed
T1018 92-97 Protein denotes RUNX3
T1019 99-104 Protein denotes FOXP3
T1020 110-115 Protein denotes TGF-β
T1021 135-138 Protein denotes CD4
T1022 139-143 Protein denotes CD25
R697 T1018 T1015 themeOf RUNX3,expressed
R698 T1019 T1016 themeOf FOXP3,expressed
R699 T1020 T1017 themeOf TGF-β,expressed

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T160 65-74 Transcription denotes expressed
T161 65-74 Transcription denotes expressed
T162 65-74 Transcription denotes expressed
T205 99-104 Protein denotes FOXP3
T206 110-115 Protein denotes TGF-β
T207 135-138 Protein denotes CD4
T209 139-143 Protein denotes CD25
T201 18-21 Protein denotes CD4
T202 23-27 Protein denotes CD25
T203 32-37 Protein denotes CD127
T204 92-97 Protein denotes RUNX3
R67 T205 T161 themeOf FOXP3,expressed
R68 T206 T162 themeOf TGF-β,expressed
R741 T204 T160 themeOf RUNX3,expressed

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T497 18-21 P01730 denotes CD4
T498 32-37 P16871 denotes CD127
T499 92-97 Q13761 denotes RUNX3
T500 99-104 Q9BZS1 denotes FOXP3
T501 110-115 P01137 denotes TGF-β
T502 135-138 P01730 denotes CD4
T503 139-143 P01589 denotes CD25

test2

Id Subject Object Predicate Lexical cue
T123 65-74 Gene_expression denotes expressed
T124 92-97 Protein denotes RUNX3
T125 99-104 Protein denotes FOXP3
T126 110-115 Protein denotes TGF-β
T127 135-138 Protein denotes CD4
T128 139-143 Protein denotes CD25
T120 18-21 Protein denotes CD4
T121 23-31 Protein denotes CD25high
T122 32-37 Protein denotes CD127
R43 T124 T123 themeOf RUNX3,expressed
R44 T125 T123 themeOf FOXP3,expressed
R45 T126 T123 themeOf TGF-β,expressed