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PMC:2806624 / 1079-1374 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T392 2-9 JJ denotes CD4-cre
T393 10-15 NN denotes mouse
T394 16-17 NN denotes T
T395 18-21 NN denotes reg
T396 22-27 NN denotes cells
T397 28-34 VB denotes showed
T398 35-45 VB denotes diminished
T399 46-57 JJ denotes suppressive
T400 58-66 NN denotes function
T401 67-69 FW denotes in
T402 70-75 FW denotes vitro
T403 77-88 VB denotes Circulating
T404 89-94 JJ denotes human
T405 95-99 JJ denotes CD4+
T406 100-108 NN denotes CD25high
T407 109-115 NN denotes CD127−
T408 116-117 NN denotes T
T409 118-121 NN denotes reg
T410 122-127 NN denotes cells
T411 128-141 RB denotes significantly
T412 142-151 VB denotes expressed
T413 152-158 JJ denotes higher
T414 159-165 NN denotes levels
T415 166-168 IN denotes of
T416 169-174 NN denotes RUNX3
T417 174-175 -COMMA- denotes ,
T418 176-181 NN denotes FOXP3
T419 181-182 -COMMA- denotes ,
T420 183-186 CC denotes and
T421 187-192 NN denotes TGF-β
T422 193-197 NN denotes mRNA
T423 198-206 VB denotes compared
T424 207-211 IN denotes with
T425 212-221 NN denotes CD4+CD25−
T426 222-227 NN denotes cells
T427 229-240 RB denotes Furthermore
T428 240-241 -COMMA- denotes ,
T429 242-247 NN denotes FOXP3
T430 248-251 CC denotes and
T431 252-257 NN denotes RUNX3
T432 258-262 VB denotes were
T433 263-274 VB denotes colocalized
T434 275-277 IN denotes in
T435 278-283 JJ denotes human
T436 284-290 NN denotes tonsil
T437 291-292 NN denotes T
R251 T396 T392 arg1Of cells,CD4-cre
R252 T396 T393 arg1Of cells,mouse
R253 T396 T394 arg1Of cells,T
R254 T396 T395 arg1Of cells,reg
R255 T397 T402 arg1Of showed,vitro
R256 T400 T397 arg2Of function,showed
R257 T400 T398 arg2Of function,diminished
R258 T400 T399 arg1Of function,suppressive
R259 T402 T401 arg1Of vitro,in
R260 T410 T403 arg1Of cells,Circulating
R261 T410 T404 arg1Of cells,human
R262 T410 T405 arg1Of cells,CD4+
R263 T410 T406 arg1Of cells,CD25high
R264 T410 T407 arg1Of cells,CD127−
R265 T410 T408 arg1Of cells,T
R266 T410 T409 arg1Of cells,reg
R267 T410 T412 arg1Of cells,expressed
R268 T412 T411 arg1Of expressed,significantly
R269 T414 T412 arg2Of levels,expressed
R270 T414 T413 arg1Of levels,higher
R271 T414 T415 arg1Of levels,of
R272 T416 T417 arg1Of RUNX3,","
R273 T417 T420 arg1Of ",",and
R274 T418 T417 arg2Of FOXP3,","
R275 T420 T415 arg2Of and,of
R276 T420 T419 arg1Of and,","
R277 T420 T423 arg1Of and,compared
R278 T422 T420 arg2Of mRNA,and
R279 T422 T421 arg1Of mRNA,TGF-β
R280 T424 T423 arg2Of with,compared
R281 T426 T424 arg2Of cells,with
R282 T426 T425 arg1Of cells,CD4+CD25−
R283 T429 T430 arg1Of FOXP3,and
R284 T430 T432 arg1Of and,were
R285 T430 T433 arg2Of and,colocalized
R286 T431 T430 arg2Of RUNX3,and
R287 T433 T427 arg1Of colocalized,Furthermore
R288 T433 T428 arg1Of colocalized,","
R289 T433 T432 arg2Of colocalized,were
R290 T433 T434 arg1Of colocalized,in

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T709 2-9 NNP denotes CD4-cre
T710 10-15 NN denotes mouse
T711 16-17 NNP denotes T
T712 18-21 NN denotes reg
T713 22-27 NNS denotes cells
T714 28-34 VBD denotes showed
T715 35-45 JJ denotes diminished
T716 46-57 JJ denotes suppressive
T717 58-66 NN denotes function
T718 67-69 IN denotes in
T719 70-75 NN denotes vitro
T720 75-76 . denotes .
T721 77-88 VBG denotes Circulating
T722 89-94 JJ denotes human
T723 95-98 NNP denotes CD4
T724 98-99 NNP denotes +
T725 100-108 NNP denotes CD25high
T726 109-114 NNP denotes CD127
T727 114-115 VBD denotes −
T728 116-117 NNP denotes T
T729 118-121 NN denotes reg
T730 122-127 NNS denotes cells
T731 128-141 RB denotes significantly
T732 142-151 VBD denotes expressed
T733 152-158 JJR denotes higher
T734 159-165 NNS denotes levels
T735 166-168 IN denotes of
T736 169-174 NNP denotes RUNX3
T737 174-175 , denotes ,
T738 176-181 NNP denotes FOXP3
T739 181-182 , denotes ,
T740 183-186 CC denotes and
T741 187-192 NNP denotes TGF-β
T742 193-197 NNP denotes mRNA
T743 198-206 VBN denotes compared
T744 207-211 IN denotes with
T745 212-215 CD denotes CD4
T746 215-216 CD denotes +
T747 216-220 NNS denotes CD25
T748 220-221 VBP denotes −
T749 222-227 NNS denotes cells
T750 227-228 . denotes .
T751 229-240 RB denotes Furthermore
T752 240-241 , denotes ,
T753 242-247 CD denotes FOXP3
T754 248-251 CC denotes and
T755 252-257 CD denotes RUNX3
T756 258-262 VBD denotes were
T757 263-274 VBN denotes colocalized
T758 275-277 IN denotes in
T759 278-283 JJ denotes human
T760 284-290 NN denotes tonsil
T761 291-292 NNP denotes T
R504 T709 T713 compound CD4-cre,cells
R505 T710 T711 compound mouse,T
R506 T711 T713 compound T,cells
R507 T712 T713 compound reg,cells
R510 T715 T717 amod diminished,function
R511 T716 T717 compound suppressive,function
R512 T717 T714 dobj function,showed
R513 T718 T717 prep in,function
R514 T719 T718 pobj vitro,in
R515 T720 T714 punct .,showed
R516 T721 T732 nsubj Circulating,expressed
R517 T722 T726 amod human,CD127
R518 T723 T724 compound CD4,+
R519 T724 T726 compound +,CD127
R520 T725 T726 compound CD25high,CD127
R521 T726 T727 nsubj CD127,−
R522 T727 T732 dep −,expressed
R523 T728 T730 compound T,cells
R524 T729 T730 compound reg,cells
R525 T730 T727 dobj cells,−
R526 T731 T732 advmod significantly,expressed
R527 T732 T732 ROOT expressed,expressed
R528 T733 T734 amod higher,levels
R529 T734 T732 dobj levels,expressed
R530 T735 T734 prep of,levels
R531 T736 T735 pobj RUNX3,of
R532 T737 T736 punct ",",RUNX3
R533 T738 T736 conj FOXP3,RUNX3
R534 T739 T738 punct ",",FOXP3
R535 T740 T738 cc and,FOXP3
R536 T741 T742 compound TGF-β,mRNA
R537 T742 T738 conj mRNA,FOXP3
R538 T743 T732 prep compared,expressed
R539 T744 T743 prep with,compared
R540 T745 T748 punct CD4,−
R541 T746 T747 nummod +,CD25
R542 T747 T748 nsubj CD25,−
R543 T748 T749 amod −,cells
R544 T749 T744 pobj cells,with
R545 T750 T732 punct .,expressed
R546 T751 T757 advmod Furthermore,colocalized
R547 T752 T757 punct ",",colocalized
R548 T753 T757 nsubjpass FOXP3,colocalized
R549 T754 T753 cc and,FOXP3
R550 T755 T753 conj RUNX3,FOXP3
R551 T756 T757 auxpass were,colocalized
R552 T757 T757 ROOT colocalized,colocalized
R553 T758 T757 prep in,colocalized
R554 T759 T760 amod human,tonsil
R555 T760 T761 compound tonsil,T

UBERON-AE

Id Subject Object Predicate Lexical cue
T137 284-290 http://purl.obolibrary.org/obo/UBERON_0002372 denotes tonsil

GO-CC

Id Subject Object Predicate Lexical cue
T880 22-27 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T881 122-127 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T882 222-227 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T145 77-228 Sentence denotes Circulating human CD4+ CD25high CD127− T reg cells significantly expressed higher levels of RUNX3, FOXP3, and TGF-β mRNA compared with CD4+CD25− cells.
T9 77-228 Sentence denotes Circulating human CD4+ CD25high CD127− T reg cells significantly expressed higher levels of RUNX3, FOXP3, and TGF-β mRNA compared with CD4+CD25− cells.

events-check-again

Id Subject Object Predicate Lexical cue
T1010 2-5 Protein denotes CD4
T1011 6-9 Protein denotes cre
T1012 95-98 Protein denotes CD4
T1013 100-104 Protein denotes CD25
T1014 109-114 Protein denotes CD127
T1015 142-151 Transcription denotes expressed
T1016 142-151 Transcription denotes expressed
T1017 142-151 Transcription denotes expressed
T1018 169-174 Protein denotes RUNX3
T1019 176-181 Protein denotes FOXP3
T1020 187-192 Protein denotes TGF-β
T1021 212-215 Protein denotes CD4
T1022 216-220 Protein denotes CD25
T1023 242-247 Protein denotes FOXP3
T1024 252-257 Protein denotes RUNX3
T1025 263-274 Localization denotes colocalized
T1026 263-274 Localization denotes colocalized
R697 T1018 T1015 themeOf RUNX3,expressed
R698 T1019 T1016 themeOf FOXP3,expressed
R699 T1020 T1017 themeOf TGF-β,expressed
R700 T1023 T1025 themeOf FOXP3,colocalized
R701 T1024 T1026 themeOf RUNX3,colocalized

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T160 142-151 Transcription denotes expressed
T161 142-151 Transcription denotes expressed
T162 142-151 Transcription denotes expressed
T163 263-274 Localization denotes colocalized
T164 263-274 Localization denotes colocalized
T205 176-181 Protein denotes FOXP3
T206 187-192 Protein denotes TGF-β
T207 212-215 Protein denotes CD4
T209 216-220 Protein denotes CD25
T210 242-247 Protein denotes FOXP3
T211 252-257 Protein denotes RUNX3
T199 2-5 Protein denotes CD4
T200 6-9 Protein denotes cre
T201 95-98 Protein denotes CD4
T202 100-104 Protein denotes CD25
T203 109-114 Protein denotes CD127
T204 169-174 Protein denotes RUNX3
R67 T205 T161 themeOf FOXP3,expressed
R68 T206 T162 themeOf TGF-β,expressed
R69 T210 T163 themeOf FOXP3,colocalized
R70 T211 T164 themeOf RUNX3,colocalized
R741 T204 T160 themeOf RUNX3,expressed

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T495 2-5 P01730 denotes CD4
T496 6-9 P06956 denotes cre
T497 95-98 P01730 denotes CD4
T498 109-114 P16871 denotes CD127
T499 169-174 Q13761 denotes RUNX3
T500 176-181 Q9BZS1 denotes FOXP3
T501 187-192 P01137 denotes TGF-β
T502 212-215 P01730 denotes CD4
T503 216-220 P01589 denotes CD25
T504 242-247 Q9BZS1 denotes FOXP3
T505 252-257 Q13761 denotes RUNX3

test2

Id Subject Object Predicate Lexical cue
T123 142-151 Gene_expression denotes expressed
T124 169-174 Protein denotes RUNX3
T125 176-181 Protein denotes FOXP3
T126 187-192 Protein denotes TGF-β
T127 212-215 Protein denotes CD4
T128 216-220 Protein denotes CD25
T129 242-247 Protein denotes FOXP3
T130 252-257 Protein denotes RUNX3
T118 2-5 Protein denotes CD4
T119 6-9 Protein denotes cre
T120 95-98 Protein denotes CD4
T121 100-108 Protein denotes CD25high
T122 109-114 Protein denotes CD127
R43 T124 T123 themeOf RUNX3,expressed
R44 T125 T123 themeOf FOXP3,expressed
R45 T126 T123 themeOf TGF-β,expressed