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PMC:2806624 / 0-419 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T222 0-13 NN denotes Transcription
T223 14-21 NN denotes factors
T224 22-27 NN denotes RUNX1
T225 28-31 CC denotes and
T226 32-37 NN denotes RUNX3
T227 38-40 IN denotes in
T228 41-44 DT denotes the
T229 45-54 NN denotes induction
T230 55-58 CC denotes and
T231 59-70 JJ denotes suppressive
T232 71-79 NN denotes function
T233 80-82 IN denotes of
T234 83-99 JJ denotes Foxp3+ inducible
T235 100-110 JJ denotes regulatory
T236 111-112 NN denotes T
T237 113-118 NN denotes cells
T238 189-197 NN denotes Forkhead
T239 198-201 NN denotes box
T240 202-204 NN denotes P3
T241 205-206 -LRB- denotes (
T242 206-211 NN denotes FOXP3
T243 211-212 -RRB- denotes )
T244 212-222 CC denotes +CD4+CD25+
T245 223-232 JJ denotes inducible
T246 233-243 JJ denotes regulatory
T247 244-245 NN denotes T
T248 246-247 -LRB- denotes (
T249 247-249 NN denotes iT
T250 250-253 NN denotes reg
T251 253-254 -RRB- denotes )
T252 255-260 NN denotes cells
T253 261-265 VB denotes play
T254 266-268 DT denotes an
T255 269-278 JJ denotes important
T256 279-283 NN denotes role
T257 284-286 IN denotes in
T258 287-293 JJ denotes immune
T259 294-303 NN denotes tolerance
T260 304-307 CC denotes and
T261 308-319 NN denotes homeostasis
T262 321-323 IN denotes In
T263 324-328 DT denotes this
T264 329-334 NN denotes study
T265 334-335 -COMMA- denotes ,
T266 336-338 PRP denotes we
T267 339-343 VB denotes show
T268 344-348 IN denotes that
T269 349-352 DT denotes the
T270 353-365 VB denotes transforming
T271 366-372 NN denotes growth
T272 373-381 NN denotes factor-β
T273 382-383 -LRB- denotes (
T274 383-388 NN denotes TGF-β
T275 388-389 -RRB- denotes )
T276 390-397 VB denotes induces
T277 398-401 DT denotes the
T278 402-412 NN denotes expression
T279 413-415 IN denotes of
T280 416-419 DT denotes the
R83 T224 T225 arg1Of RUNX1,and
R84 T225 T222 arg1Of and,Transcription
R85 T225 T223 arg1Of and,factors
R86 T225 T227 arg1Of and,in
R87 T225 T230 arg1Of and,and
R88 T226 T225 arg2Of RUNX3,and
R89 T229 T227 arg2Of induction,in
R90 T229 T228 arg1Of induction,the
R91 T232 T230 arg2Of function,and
R92 T232 T231 arg1Of function,suppressive
R93 T232 T233 arg1Of function,of
R94 T237 T233 arg2Of cells,of
R95 T237 T234 arg1Of cells,Foxp3+ inducible
R96 T237 T235 arg1Of cells,regulatory
R97 T237 T236 arg1Of cells,T
R98 T240 T238 arg1Of P3,Forkhead
R99 T240 T239 arg1Of P3,box
R100 T240 T241 arg1Of P3,(
R101 T240 T244 arg1Of P3,+CD4+CD25+
R102 T242 T241 arg2Of FOXP3,(
R103 T243 T241 arg3Of ),(
R104 T244 T253 arg1Of +CD4+CD25+,play
R105 T249 T248 arg2Of iT,(
R106 T249 T250 arg1Of iT,reg
R107 T251 T248 arg3Of ),(
R108 T252 T244 arg2Of cells,+CD4+CD25+
R109 T252 T245 arg1Of cells,inducible
R110 T252 T246 arg1Of cells,regulatory
R111 T252 T247 arg1Of cells,T
R112 T252 T248 arg1Of cells,(
R113 T253 T257 arg1Of play,in
R114 T256 T253 arg2Of role,play
R115 T256 T254 arg1Of role,an
R116 T256 T255 arg1Of role,important
R117 T259 T260 arg1Of tolerance,and
R118 T260 T257 arg2Of and,in
R119 T260 T258 arg1Of and,immune
R120 T261 T260 arg2Of homeostasis,and
R121 T264 T262 arg2Of study,In
R122 T264 T263 arg1Of study,this
R123 T266 T267 arg1Of we,show
R124 T267 T262 arg1Of show,In
R125 T267 T265 arg1Of show,","
R126 T272 T269 arg1Of factor-β,the
R127 T272 T270 arg1Of factor-β,transforming
R128 T272 T271 arg1Of factor-β,growth
R129 T272 T273 arg1Of factor-β,(
R130 T272 T276 arg1Of factor-β,induces
R131 T274 T273 arg2Of TGF-β,(
R132 T275 T273 arg3Of ),(
R133 T276 T267 arg2Of induces,show
R134 T276 T268 arg1Of induces,that
R135 T278 T276 arg2Of expression,induces
R136 T278 T277 arg1Of expression,the
R137 T278 T279 arg1Of expression,of

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T521 0-13 NNP denotes Transcription
T522 14-21 NNS denotes factors
T523 22-27 NNP denotes RUNX1
T524 28-31 CC denotes and
T525 32-37 NNP denotes RUNX3
T526 38-40 IN denotes in
T527 41-44 DT denotes the
T528 45-54 NN denotes induction
T529 55-58 CC denotes and
T530 59-70 JJ denotes suppressive
T531 71-79 NN denotes function
T532 80-82 IN denotes of
T533 83-88 JJ denotes Foxp3
T534 88-89 NN denotes +
T535 90-99 JJ denotes inducible
T536 100-110 JJ denotes regulatory
T537 111-112 NNP denotes T
T538 113-118 NNS denotes cells
T539 189-197 NNP denotes Forkhead
T540 198-201 NN denotes box
T541 202-204 NN denotes P3
T542 205-206 -LRB- denotes (
T543 206-211 CD denotes FOXP3
T544 211-212 -RRB- denotes )
T545 212-213 FW denotes +
T546 213-216 FW denotes CD4
T547 216-217 FW denotes +
T548 217-221 FW denotes CD25
T549 221-222 FW denotes +
T550 223-232 FW denotes inducible
T551 233-243 JJ denotes regulatory
T552 244-245 NNP denotes T
T553 246-247 -LRB- denotes (
T554 247-249 NNP denotes iT
T555 250-253 NN denotes reg
T556 253-254 -RRB- denotes )
T557 255-260 NNS denotes cells
T558 261-265 VBP denotes play
T559 266-268 DT denotes an
T560 269-278 JJ denotes important
T561 279-283 NN denotes role
T562 284-286 IN denotes in
T563 287-293 JJ denotes immune
T564 294-303 NN denotes tolerance
T565 304-307 CC denotes and
T566 308-319 NN denotes homeostasis
T567 319-320 . denotes .
T568 321-323 IN denotes In
T569 324-328 DT denotes this
T570 329-334 NN denotes study
T571 334-335 , denotes ,
T572 336-338 PRP denotes we
T573 339-343 VBP denotes show
T574 344-348 IN denotes that
T575 349-352 DT denotes the
T576 353-365 VBG denotes transforming
T577 366-372 NN denotes growth
T578 373-381 NN denotes factor-β
T579 382-383 -LRB- denotes (
T580 383-388 NNP denotes TGF-β
T581 388-389 -RRB- denotes )
T582 390-397 VBZ denotes induces
T583 398-401 DT denotes the
T584 402-412 NN denotes expression
T585 413-415 IN denotes of
T586 416-419 DT denotes the
R316 T521 T522 compound Transcription,factors
R317 T522 T558 nsubj factors,play
R318 T523 T552 nmod RUNX1,T
R319 T524 T523 cc and,RUNX1
R320 T525 T523 conj RUNX3,RUNX1
R321 T526 T523 prep in,RUNX1
R322 T527 T528 det the,induction
R323 T528 T531 nmod induction,function
R324 T529 T528 cc and,induction
R325 T530 T531 amod suppressive,function
R326 T531 T526 pobj function,in
R327 T532 T531 prep of,function
R328 T533 T538 amod Foxp3,cells
R329 T534 T538 nmod +,cells
R330 T535 T538 amod inducible,cells
R331 T536 T538 amod regulatory,cells
R332 T537 T538 compound T,cells
R333 T538 T532 pobj cells,of
R334 T539 T541 nmod Forkhead,P3
R335 T540 T541 compound box,P3
R336 T541 T523 conj P3,RUNX1
R337 T542 T541 punct (,P3
R338 T543 T541 appos FOXP3,P3
R339 T544 T541 punct ),P3
R340 T545 T552 nmod +,T
R341 T546 T552 nmod CD4,T
R342 T547 T552 nmod +,T
R343 T548 T552 nmod CD25,T
R344 T549 T550 nmod +,inducible
R345 T550 T552 nmod inducible,T
R346 T551 T552 amod regulatory,T
R347 T552 T557 nmod T,cells
R348 T553 T555 punct (,reg
R349 T554 T555 compound iT,reg
R350 T555 T552 appos reg,T
R351 T556 T557 punct ),cells
R352 T557 T558 nsubj cells,play
R353 T558 T558 ROOT play,play
R354 T559 T561 det an,role
R355 T560 T561 amod important,role
R356 T561 T558 dobj role,play
R357 T562 T558 prep in,play
R358 T563 T564 amod immune,tolerance
R359 T564 T562 pobj tolerance,in
R360 T565 T564 cc and,tolerance
R361 T566 T564 conj homeostasis,tolerance
R362 T567 T558 punct .,play
R363 T568 T573 prep In,show
R364 T569 T570 det this,study
R365 T570 T568 pobj study,In
R366 T571 T573 punct ",",show
R367 T572 T573 nsubj we,show
R368 T573 T573 ROOT show,show
R369 T574 T582 mark that,induces
R370 T575 T578 det the,factor-β
R371 T576 T578 amod transforming,factor-β
R372 T577 T578 compound growth,factor-β
R373 T578 T582 nsubj factor-β,induces
R374 T579 T580 punct (,TGF-β
R375 T580 T578 appos TGF-β,factor-β
R376 T581 T578 punct ),factor-β
R377 T582 T573 ccomp induces,show
R378 T583 T584 det the,expression
R379 T584 T582 dobj expression,induces
R380 T585 T584 prep of,expression

GO-BP

Id Subject Object Predicate Lexical cue
T788 0-13 http://purl.obolibrary.org/obo/GO_0006351 denotes Transcription
T791 308-319 http://purl.obolibrary.org/obo/GO_0042592 denotes homeostasis
T792 366-372 http://purl.obolibrary.org/obo/GO_0040007 denotes growth

GO-MF

Id Subject Object Predicate Lexical cue
T868 366-381 http://purl.obolibrary.org/obo/GO_0005160 denotes growth factor-β

GO-CC

Id Subject Object Predicate Lexical cue
T872 113-118 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T873 255-260 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T138 0-118 Sentence denotes Transcription factors RUNX1 and RUNX3 in the induction and suppressive function of Foxp3+ inducible regulatory T cells
T139 189-320 Sentence denotes Forkhead box P3 (FOXP3)+CD4+CD25+ inducible regulatory T (iT reg) cells play an important role in immune tolerance and homeostasis.
T1 0-177 Sentence denotes Transcription factors RUNX1 and RUNX3 in the induction and suppressive function of Foxp3+ inducible regulatory T cells RUNX1 and RUNX3 in functional inducible T regulatory cells
T2 180-188 Sentence denotes Abstract
T3 189-320 Sentence denotes Forkhead box P3 (FOXP3)+CD4+CD25+ inducible regulatory T (iT reg) cells play an important role in immune tolerance and homeostasis.

events-check-again

Id Subject Object Predicate Lexical cue
T960 22-27 Protein denotes RUNX1
T961 32-37 Protein denotes RUNX3
T962 83-88 Protein denotes Foxp3
T963 189-204 Protein denotes Forkhead box P3
T964 206-211 Protein denotes FOXP3
T965 213-216 Protein denotes CD4
T966 217-221 Protein denotes CD25
T967 353-381 Protein denotes transforming growth factor-β
T968 383-388 Protein denotes TGF-β
T969 390-397 Positive_regulation denotes induces
T970 390-397 Positive_regulation denotes induces
T971 402-412 Gene_expression denotes expression
T972 402-412 Gene_expression denotes expression
R667 T964 T963 equivalentTo FOXP3,Forkhead box P3
R668 T967 T968 equivalentTo transforming growth factor-β,TGF-β
R669 T968 T969 causeOf TGF-β,induces
R670 T968 T970 causeOf TGF-β,induces
R671 T971 T969 themeOf expression,induces
R672 T972 T970 themeOf expression,induces

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T148 390-397 Positive_regulation denotes induces
T159 402-412 Gene_expression denotes expression
T168 390-397 Positive_regulation denotes induces
T169 402-412 Gene_expression denotes expression
T175 22-27 Protein denotes RUNX1
T208 189-204 Protein denotes Forkhead box P3
T214 206-211 Protein denotes FOXP3
T217 213-216 Protein denotes CD4
T218 217-221 Protein denotes CD25
T219 353-381 Protein denotes transforming growth factor-β
T220 383-388 Protein denotes TGF-β
T186 32-37 Protein denotes RUNX3
T197 83-88 Protein denotes Foxp3
R57 T159 T148 themeOf expression,induces
R60 T169 T168 themeOf expression,induces
R73 T214 T208 equivalentTo FOXP3,Forkhead box P3
R79 T219 T220 equivalentTo transforming growth factor-β,TGF-β
R80 T220 T148 causeOf TGF-β,induces
R81 T220 T168 causeOf TGF-β,induces

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T461 22-27 Q01196 denotes RUNX1
T462 32-37 Q13761 denotes RUNX3
T463 83-88 Q9BZS1 denotes Foxp3
T464 206-211 Q9BZS1 denotes FOXP3
T465 213-216 P01730 denotes CD4
T466 217-221 P01589 denotes CD25
T467 353-381 P01137 denotes transforming growth factor-β
T468 383-388 P01137 denotes TGF-β

test2

Id Subject Object Predicate Lexical cue Speculation
T75 22-27 Protein denotes RUNX1
T76 32-37 Protein denotes RUNX3
T77 83-88 Protein denotes Foxp3
T78 189-204 Protein denotes Forkhead box P3
T79 206-211 Protein denotes FOXP3 true
T80 213-216 Protein denotes CD4
T81 217-221 Protein denotes CD25 true
T82 353-381 Protein denotes transforming growth factor-β
T83 383-388 Protein denotes TGF-β
T84 390-397 Positive_regulation denotes induces
T85 402-412 Gene_expression denotes expression
R709 T79 T78 equivalentTo FOXP3,Forkhead box P3
R710 T82 T83 equivalentTo transforming growth factor-β,TGF-β
R711 T82 T84 causeOf transforming growth factor-β,induces
R712 T83 T84 causeOf TGF-β,induces
R713 T85 T84 themeOf expression,induces