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PMC:2800179 / 7863-8102 JSONTXT

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GO-BP

Id Subject Object Predicate Lexical cue
T3634 152-164 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T3227 2-9 NN denotes content
T3228 10-13 VB denotes was
T3229 14-21 VB denotes removed
T3230 22-24 IN denotes by
T3231 25-34 NN denotes vortexing
T3232 36-39 DT denotes The
T3233 40-45 VB denotes fixed
T3234 46-53 NN denotes segment
T3235 54-57 VB denotes was
T3236 58-62 VB denotes kept
T3237 63-65 IN denotes in
T3238 66-68 CD denotes 10
T3239 68-69 NN denotes %
T3240 70-78 NN denotes formalin
T3241 79-81 IN denotes at
T3242 82-85 NN denotes 4°C
T3243 86-91 IN denotes until
T3244 92-95 DT denotes the
T3245 96-104 NN denotes paraffin
T3246 105-114 NN denotes embedding
T3247 115-124 NN denotes procedure
T3248 126-128 TO denotes To
T3249 129-137 VB denotes evaluate
T3250 138-141 DT denotes the
T3251 142-148 NN denotes degree
T3252 149-151 IN denotes of
T3253 152-164 NN denotes inflammation
T3254 164-165 -COMMA- denotes ,
T3255 166-170 DT denotes this
T3256 171-178 NN denotes segment
T3257 179-181 IN denotes of
T3258 182-187 NN denotes colon
T3259 188-191 VB denotes was
T3260 192-198 VB denotes opened
T3261 199-213 RB denotes longitudinally
T3262 214-217 CC denotes and
T3263 218-229 JJ denotes macroscopic
T3264 230-233 CC denotes and
R2869 T3227 T3228 arg1Of content,was
R2870 T3227 T3229 arg2Of content,removed
R2873 T3229 T3228 arg2Of removed,was
R2874 T3231 T3229 arg1Of vortexing,removed
R2875 T3231 T3230 arg2Of vortexing,by
R2876 T3234 T3232 arg1Of segment,The
R2877 T3234 T3233 arg2Of segment,fixed
R2878 T3234 T3235 arg1Of segment,was
R2879 T3234 T3236 arg2Of segment,kept
R2880 T3236 T3235 arg2Of kept,was
R2881 T3236 T3237 arg1Of kept,in
R2882 T3236 T3241 arg1Of kept,at
R2883 T3236 T3243 arg1Of kept,until
R2884 T3238 T3239 arg1Of 10,%
R2885 T3240 T3237 arg2Of formalin,in
R2886 T3240 T3238 arg1Of formalin,10
R2887 T3242 T3241 arg2Of 4°C,at
R2888 T3247 T3243 arg2Of procedure,until
R2889 T3247 T3244 arg1Of procedure,the
R2890 T3247 T3245 arg1Of procedure,paraffin
R2891 T3247 T3246 arg1Of procedure,embedding
R2892 T3249 T3248 arg1Of evaluate,To
R2893 T3251 T3249 arg2Of degree,evaluate
R2894 T3251 T3250 arg1Of degree,the
R2895 T3251 T3252 arg1Of degree,of
R2896 T3253 T3252 arg2Of inflammation,of
R2897 T3256 T3255 arg1Of segment,this
R2898 T3256 T3257 arg1Of segment,of
R2899 T3256 T3259 arg1Of segment,was
R2900 T3256 T3260 arg2Of segment,opened
R2901 T3258 T3257 arg2Of colon,of
R2902 T3260 T3259 arg2Of opened,was
R2903 T3260 T3261 arg1Of opened,longitudinally
R2904 T3263 T3264 arg1Of macroscopic,and

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T3470 2-9 NN denotes content
T3471 10-13 VBD denotes was
T3472 14-21 VBN denotes removed
T3473 22-24 IN denotes by
T3474 25-34 VBG denotes vortexing
T3475 34-35 . denotes .
T3476 36-39 DT denotes The
T3477 40-45 VBN denotes fixed
T3478 46-53 NN denotes segment
T3479 54-57 VBD denotes was
T3480 58-62 VBN denotes kept
T3481 63-65 IN denotes in
T3482 66-68 CD denotes 10
T3483 68-69 NN denotes %
T3484 70-78 NN denotes formalin
T3485 79-81 IN denotes at
T3486 82-83 CD denotes 4
T3487 83-84 CD denotes °
T3488 84-85 NNP denotes C
T3489 86-91 IN denotes until
T3490 92-95 DT denotes the
T3491 96-104 NN denotes paraffin
T3492 105-114 NN denotes embedding
T3493 115-124 NN denotes procedure
T3494 124-125 . denotes .
T3495 126-128 TO denotes To
T3496 129-137 VB denotes evaluate
T3497 138-141 DT denotes the
T3498 142-148 NN denotes degree
T3499 149-151 IN denotes of
T3500 152-164 NN denotes inflammation
T3501 164-165 , denotes ,
T3502 166-170 DT denotes this
T3503 171-178 NN denotes segment
T3504 179-181 IN denotes of
T3505 182-187 NN denotes colon
T3506 188-191 VBD denotes was
T3507 192-198 VBN denotes opened
T3508 199-213 RB denotes longitudinally
T3509 214-217 CC denotes and
T3510 218-229 JJ denotes macroscopic
T3511 230-233 CC denotes and
R3114 T3470 T3472 nsubjpass content,removed
R3115 T3471 T3472 auxpass was,removed
R3116 T3472 T3472 ROOT removed,removed
R3117 T3473 T3472 agent by,removed
R3118 T3474 T3473 pobj vortexing,by
R3119 T3475 T3472 punct .,removed
R3120 T3476 T3478 det The,segment
R3121 T3477 T3478 amod fixed,segment
R3122 T3478 T3480 nsubjpass segment,kept
R3123 T3479 T3480 auxpass was,kept
R3124 T3480 T3480 ROOT kept,kept
R3125 T3481 T3480 oprd in,kept
R3126 T3482 T3483 nummod 10,%
R3127 T3483 T3484 compound %,formalin
R3128 T3484 T3481 pobj formalin,in
R3129 T3485 T3480 prep at,kept
R3130 T3486 T3487 nummod 4,°
R3131 T3487 T3488 nummod °,C
R3132 T3488 T3485 pobj C,at
R3133 T3489 T3480 prep until,kept
R3134 T3490 T3493 det the,procedure
R3135 T3491 T3492 compound paraffin,embedding
R3136 T3492 T3493 compound embedding,procedure
R3137 T3493 T3489 pobj procedure,until
R3138 T3494 T3480 punct .,kept
R3139 T3495 T3496 aux To,evaluate
R3140 T3496 T3507 advcl evaluate,opened
R3141 T3497 T3498 det the,degree
R3142 T3498 T3496 dobj degree,evaluate
R3143 T3499 T3498 prep of,degree
R3144 T3500 T3499 pobj inflammation,of
R3145 T3501 T3507 punct ",",opened
R3146 T3502 T3503 det this,segment
R3147 T3503 T3507 nsubjpass segment,opened
R3148 T3504 T3503 prep of,segment
R3149 T3505 T3504 pobj colon,of
R3150 T3506 T3507 auxpass was,opened
R3151 T3507 T3507 ROOT opened,opened
R3152 T3508 T3507 advmod longitudinally,opened
R3153 T3509 T3508 cc and,longitudinally
R3154 T3510 T3508 conj macroscopic,longitudinally
R3155 T3511 T3510 cc and,macroscopic

UBERON-AE

Id Subject Object Predicate Lexical cue
T3103 182-187 http://purl.obolibrary.org/obo/UBERON_0001155 denotes colon

sentences

Id Subject Object Predicate Lexical cue
T3124 36-125 Sentence denotes The fixed segment was kept in 10% formalin at 4°C until the paraffin embedding procedure.
T69 36-125 Sentence denotes The fixed segment was kept in 10% formalin at 4°C until the paraffin embedding procedure.