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PMC:2800179 / 35927-36121
Annnotations
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15110 | 117-124 | http://purl.obolibrary.org/obo/GO_0005634 | denotes | nucleus |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15044 | 21-37 | http://purl.obolibrary.org/obo/GO_0051092 | denotes | NF-κB activation |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T12776 | 0-6 | RB | denotes | Indeed |
T12777 | 6-7 | -COMMA- | denotes | , |
T12778 | 8-12 | NN | denotes | dCGN |
T12779 | 13-20 | VB | denotes | induced |
T12780 | 21-26 | NN | denotes | NF-κB |
T12781 | 27-37 | NN | denotes | activation |
T12782 | 38-40 | IN | denotes | as |
T12783 | 41-46 | VB | denotes | shown |
T12784 | 47-49 | IN | denotes | by |
T12785 | 50-61 | NN | denotes | degradation |
T12786 | 62-64 | IN | denotes | of |
T12787 | 65-69 | NN | denotes | IκBα |
T12788 | 69-70 | -COMMA- | denotes | , |
T12789 | 71-84 | NN | denotes | translocation |
T12790 | 85-87 | IN | denotes | of |
T12791 | 88-91 | NN | denotes | p65 |
T12792 | 92-95 | CC | denotes | and |
T12793 | 96-99 | NN | denotes | p50 |
T12794 | 100-109 | NN | denotes | sub-units |
T12795 | 110-112 | TO | denotes | to |
T12796 | 113-116 | DT | denotes | the |
T12797 | 117-124 | NN | denotes | nucleus |
T12798 | 125-128 | CC | denotes | and |
T12799 | 129-131 | IN | denotes | by |
T12800 | 132-142 | NN | denotes | activation |
T12801 | 143-145 | IN | denotes | of |
T12802 | 146-148 | DT | denotes | an |
T12803 | 149-165 | JJ | denotes | NF-κB-responsive |
T12804 | 166-176 | NN | denotes | luciferase |
T12805 | 177-185 | NN | denotes | reporter |
T12806 | 186-193 | NN | denotes | plasmid |
R10950 | T12778 | T12779 | arg1Of | dCGN,induced |
R10951 | T12779 | T12776 | arg1Of | induced,Indeed |
R10952 | T12779 | T12777 | arg1Of | induced,"," |
R10953 | T12779 | T12782 | arg1Of | induced,as |
R10954 | T12781 | T12779 | arg2Of | activation,induced |
R10955 | T12781 | T12780 | arg1Of | activation,NF-κB |
R10956 | T12783 | T12782 | arg2Of | shown,as |
R10957 | T12785 | T12783 | arg1Of | degradation,shown |
R10958 | T12785 | T12784 | arg2Of | degradation,by |
R10959 | T12785 | T12786 | arg1Of | degradation,of |
R10960 | T12785 | T12799 | arg1Of | degradation,by |
R10961 | T12786 | T12798 | arg1Of | of,and |
R10962 | T12787 | T12788 | arg1Of | IκBα,"," |
R10963 | T12788 | T12786 | arg2Of | ",",of |
R10964 | T12789 | T12788 | arg2Of | translocation,"," |
R10965 | T12789 | T12790 | arg1Of | translocation,of |
R10966 | T12789 | T12795 | arg1Of | translocation,to |
R10967 | T12791 | T12792 | arg1Of | p65,and |
R10968 | T12793 | T12792 | arg2Of | p50,and |
R10969 | T12794 | T12790 | arg2Of | sub-units,of |
R10970 | T12794 | T12791 | arg1Of | sub-units,p65 |
R10971 | T12794 | T12793 | arg1Of | sub-units,p50 |
R10972 | T12797 | T12795 | arg2Of | nucleus,to |
R10973 | T12797 | T12796 | arg1Of | nucleus,the |
R10974 | T12799 | T12798 | arg2Of | by,and |
R10975 | T12800 | T12799 | arg2Of | activation,by |
R10976 | T12800 | T12801 | arg1Of | activation,of |
R10977 | T12806 | T12801 | arg2Of | plasmid,of |
R10978 | T12806 | T12802 | arg1Of | plasmid,an |
R10979 | T12806 | T12803 | arg1Of | plasmid,NF-κB-responsive |
R10980 | T12806 | T12804 | arg1Of | plasmid,luciferase |
R10981 | T12806 | T12805 | arg1Of | plasmid,reporter |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14457 | 0-6 | RB | denotes | Indeed |
T14458 | 6-7 | , | denotes | , |
T14459 | 8-12 | NNP | denotes | dCGN |
T14460 | 13-20 | VBD | denotes | induced |
T14461 | 21-26 | NNP | denotes | NF-κB |
T14462 | 27-37 | NN | denotes | activation |
T14463 | 38-40 | IN | denotes | as |
T14464 | 41-46 | VBN | denotes | shown |
T14465 | 47-49 | IN | denotes | by |
T14466 | 50-61 | NN | denotes | degradation |
T14467 | 62-64 | IN | denotes | of |
T14468 | 65-69 | NNP | denotes | IκBα |
T14469 | 69-70 | , | denotes | , |
T14470 | 71-84 | NN | denotes | translocation |
T14471 | 85-87 | IN | denotes | of |
T14472 | 88-91 | CD | denotes | p65 |
T14473 | 92-95 | CC | denotes | and |
T14474 | 96-99 | CD | denotes | p50 |
T14475 | 100-109 | NNS | denotes | sub-units |
T14476 | 110-112 | TO | denotes | to |
T14477 | 113-116 | DT | denotes | the |
T14478 | 117-124 | NN | denotes | nucleus |
T14479 | 125-128 | CC | denotes | and |
T14480 | 129-131 | IN | denotes | by |
T14481 | 132-142 | NN | denotes | activation |
T14482 | 143-145 | IN | denotes | of |
T14483 | 146-148 | DT | denotes | an |
T14484 | 149-165 | JJ | denotes | NF-κB-responsive |
T14485 | 166-176 | NN | denotes | luciferase |
T14486 | 177-185 | NN | denotes | reporter |
T14487 | 186-193 | NN | denotes | plasmid |
T14488 | 193-194 | . | denotes | . |
R12550 | T14457 | T14460 | advmod | Indeed,induced |
R12551 | T14458 | T14460 | punct | ",",induced |
R12553 | T14459 | T14460 | nsubj | dCGN,induced |
R12554 | T14460 | T14460 | ROOT | induced,induced |
R12555 | T14461 | T14462 | compound | NF-κB,activation |
R12557 | T14462 | T14460 | dobj | activation,induced |
R12558 | T14463 | T14464 | mark | as,shown |
R12559 | T14464 | T14460 | advcl | shown,induced |
R12561 | T14465 | T14464 | agent | by,shown |
R12562 | T14466 | T14465 | pobj | degradation,by |
R12564 | T14467 | T14466 | prep | of,degradation |
R12565 | T14468 | T14467 | pobj | IκBα,of |
R12566 | T14469 | T14468 | punct | ",",IκBα |
R12568 | T14470 | T14468 | appos | translocation,IκBα |
R12569 | T14471 | T14470 | prep | of,translocation |
R12571 | T14472 | T14471 | pobj | p65,of |
R12572 | T14473 | T14472 | cc | and,p65 |
R12573 | T14474 | T14472 | conj | p50,p65 |
R12574 | T14475 | T14471 | pobj | sub-units,of |
R12575 | T14476 | T14460 | prep | to,induced |
R12576 | T14477 | T14478 | det | the,nucleus |
R12578 | T14478 | T14476 | pobj | nucleus,to |
R12579 | T14479 | T14460 | cc | and,induced |
R12581 | T14480 | T14460 | agent | by,induced |
R12582 | T14481 | T14480 | pobj | activation,by |
R12585 | T14482 | T14481 | prep | of,activation |
R12586 | T14483 | T14487 | det | an,plasmid |
R12587 | T14484 | T14487 | amod | NF-κB-responsive,plasmid |
R12589 | T14485 | T14487 | compound | luciferase,plasmid |
R12590 | T14486 | T14487 | compound | reporter,plasmid |
R12591 | T14487 | T14482 | pobj | plasmid,of |
R12593 | T14488 | T14460 | punct | .,induced |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11623 | 0-194 | Sentence | denotes | Indeed, dCGN induced NF-κB activation as shown by degradation of IκBα, translocation of p65 and p50 sub-units to the nucleus and by activation of an NF-κB-responsive luciferase reporter plasmid. |
T310 | 0-194 | Sentence | denotes | Indeed, dCGN induced NF-κB activation as shown by degradation of IκBα, translocation of p65 and p50 sub-units to the nucleus and by activation of an NF-κB-responsive luciferase reporter plasmid. |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15396 | 50-61 | Protein_catabolism | denotes | degradation |
T15397 | 65-69 | Protein | denotes | IκBα |
T15398 | 71-84 | Localization | denotes | translocation |
T15399 | 71-84 | Localization | denotes | translocation |
T15400 | 88-91 | Protein | denotes | p65 |
T15401 | 96-99 | Protein | denotes | p50 |
T15402 | 117-124 | Entity | denotes | nucleus |
T15403 | 132-142 | Positive_regulation | denotes | activation |
T15404 | 155-165 | Regulation | denotes | responsive |
T15405 | 166-176 | Protein | denotes | luciferase |
R13246 | T15397 | T15396 | themeOf | IκBα,degradation |
R13250 | T15400 | T15399 | themeOf | p65,translocation |
R13252 | T15401 | T15398 | themeOf | p50,translocation |
R13253 | T15402 | T15399 | locationOf | nucleus,translocation |
R13254 | T15402 | T15398 | locationOf | nucleus,translocation |
R13256 | T15404 | T15403 | themeOf | responsive,activation |
R13257 | T15405 | T15404 | themeOf | luciferase,responsive |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15506 | 21-26 | Protein | denotes | NF-κB |
T15507 | 65-69 | Protein | denotes | IκBα |
T15508 | 88-91 | Protein | denotes | p65 |
T15509 | 96-99 | Protein | denotes | p50 |
T15510 | 149-151 | Protein | denotes | NF |
T15511 | 152-154 | Protein | denotes | κB |
T15512 | 166-176 | Protein | denotes | luciferase |
T15513 | 27-37 | Positive_regulation | denotes | activation |
T15514 | 50-61 | Protein_catabolism | denotes | degradation |
T15515 | 117-124 | Entity | denotes | nucleus |
T15516 | 132-142 | Positive_regulation | denotes | activation |
T15517 | 13-20 | Positive_regulation | denotes | induced |
T15518 | 71-84 | Localization | denotes | translocation |
T15519 | 71-84 | Localization | denotes | translocation |
T15520 | 71-84 | Localization | denotes | translocation |
T15521 | 132-142 | Positive_regulation | denotes | activation |
T15522 | 132-142 | Positive_regulation | denotes | activation |
T15523 | 132-142 | Positive_regulation | denotes | activation |
R13306 | T15506 | T15513 | themeOf | NF-κB,activation |
R13307 | T15507 | T15514 | themeOf | IκBα,degradation |
R13308 | T15507 | T15518 | themeOf | IκBα,translocation |
R13309 | T15508 | T15519 | themeOf | p65,translocation |
R13310 | T15509 | T15520 | themeOf | p50,translocation |
R13312 | T15512 | T15516 | themeOf | luciferase,activation |
R13313 | T15513 | T15517 | themeOf | activation,induced |
R13315 | T15515 | T15518 | locationOf | nucleus,translocation |
R13316 | T15515 | T15519 | locationOf | nucleus,translocation |
R13317 | T15515 | T15520 | locationOf | nucleus,translocation |
R13318 | T15518 | T15521 | themeOf | translocation,activation |
R13320 | T15519 | T15522 | themeOf | translocation,activation |
R13321 | T15520 | T15523 | themeOf | translocation,activation |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11537 | 50-61 | Protein_catabolism | denotes | degradation |
T11538 | 65-69 | Protein | denotes | IκBα |
T11539 | 71-84 | Localization | denotes | translocation |
T11540 | 71-84 | Localization | denotes | translocation |
T11541 | 88-91 | Protein | denotes | p65 |
T11542 | 96-99 | Protein | denotes | p50 |
T11543 | 117-124 | Entity | denotes | nucleus |
T11544 | 132-142 | Positive_regulation | denotes | activation |
T11545 | 155-165 | Regulation | denotes | responsive |
T11546 | 166-176 | Protein | denotes | luciferase |
R9764 | T11538 | T11537 | themeOf | IκBα,degradation |
R9765 | T11541 | T11540 | themeOf | p65,translocation |
R9766 | T11542 | T11539 | themeOf | p50,translocation |
R9767 | T11543 | T11540 | locationOf | nucleus,translocation |
R9768 | T11543 | T11539 | locationOf | nucleus,translocation |
R9769 | T11545 | T11544 | themeOf | responsive,activation |
R9770 | T11546 | T11545 | themeOf | luciferase,responsive |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T13261 | 65-69 | P25963 | denotes | IκBα |
T13262 | 88-91 | Q04206 | denotes | p65 |
T13263 | 88-91 | P21579 | denotes | p65 |
T13264 | 96-99 | P19838 | denotes | p50 |
T13265 | 166-176 | P08659 | denotes | luciferase |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11415 | 50-61 | Protein_catabolism | denotes | degradation |
T11416 | 65-69 | Protein | denotes | IκBα |
T11417 | 71-84 | Localization | denotes | translocation |
T11418 | 88-91 | Protein | denotes | p65 |
T11419 | 96-99 | Protein | denotes | p50 |
T11420 | 117-124 | Entity | denotes | nucleus |
T11421 | 132-142 | Positive_regulation | denotes | activation |
T11422 | 166-176 | Protein | denotes | luciferase |
R9705 | T11416 | T11415 | themeOf | IκBα,degradation |
R9706 | T11418 | T11417 | themeOf | p65,translocation |
R9707 | T11419 | T11417 | themeOf | p50,translocation |
R9708 | T11420 | T11417 | locationOf | nucleus,translocation |