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PMC:2800179 / 25567-25762 JSONTXT

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GO-MF

Id Subject Object Predicate Lexical cue
T17417 26-28 http://purl.obolibrary.org/obo/GO_0003964 denotes RT

GO-BP

Id Subject Object Predicate Lexical cue
T17414 131-139 http://purl.obolibrary.org/obo/GO_0009056 denotes degraded
T17416 26-28 http://purl.obolibrary.org/obo/GO_0003964 denotes RT

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T17333 0-14 JJ denotes Representative
T17334 15-22 NN denotes samples
T17335 23-25 IN denotes of
T17336 26-32 NN denotes RT-PCR
T17337 33-41 NN denotes analysis
T17338 42-49 VB denotes showing
T17339 50-54 IN denotes over
T17340 55-65 NN denotes expression
T17341 66-68 IN denotes of
T17342 69-75 NN denotes ICAM-1
T17343 76-79 CC denotes and
T17344 80-85 NN denotes TNF-α
T17345 86-91 IN denotes after
T17346 92-103 NN denotes stimulation
T17347 104-106 IN denotes of
T17348 107-116 NN denotes monocytes
T17349 117-121 IN denotes with
T17350 122-123 CD denotes 1
T17351 124-127 NN denotes g/l
T17352 128-130 IN denotes of
T17353 131-139 VB denotes degraded
T17354 140-144 NNP denotes CGN.
T17355 145-152 NN denotes β-actin
T17356 153-163 NN denotes expression
T17357 164-167 VB denotes was
T17358 168-172 VB denotes used
T17359 173-175 IN denotes as
T17360 176-189 NN denotes normalization
T17361 190-194 NN denotes gene
R14837 T17334 T17333 arg1Of samples,Representative
R14838 T17334 T17335 arg1Of samples,of
R14839 T17334 T17357 arg1Of samples,was
R14840 T17334 T17358 arg2Of samples,used
R14841 T17337 T17335 arg2Of analysis,of
R14842 T17337 T17336 arg1Of analysis,RT-PCR
R14843 T17337 T17338 arg1Of analysis,showing
R14844 T17338 T17339 arg1Of showing,over
R14845 T17338 T17345 arg1Of showing,after
R14846 T17340 T17339 arg2Of expression,over
R14847 T17340 T17341 arg1Of expression,of
R14848 T17342 T17343 arg1Of ICAM-1,and
R14849 T17343 T17341 arg2Of and,of
R14850 T17344 T17343 arg2Of TNF-α,and
R14851 T17346 T17345 arg2Of stimulation,after
R14852 T17346 T17347 arg1Of stimulation,of
R14853 T17346 T17349 arg1Of stimulation,with
R14854 T17348 T17347 arg2Of monocytes,of
R14855 T17351 T17349 arg2Of g/l,with
R14856 T17351 T17350 arg1Of g/l,1
R14857 T17351 T17352 arg1Of g/l,of
R14858 T17356 T17352 arg2Of expression,of
R14859 T17356 T17353 arg2Of expression,degraded
R14860 T17356 T17354 arg1Of expression,CGN.
R14861 T17356 T17355 arg1Of expression,β-actin
R14862 T17358 T17357 arg2Of used,was
R14863 T17358 T17359 arg1Of used,as
R14864 T17361 T17359 arg2Of gene,as
R14865 T17361 T17360 arg1Of gene,normalization

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T17380 0-14 NNP denotes Representative
T17381 15-22 NNS denotes samples
T17382 23-25 IN denotes of
T17383 26-32 NN denotes RT-PCR
T17384 33-41 NN denotes analysis
T17385 42-49 VBG denotes showing
T17386 50-54 IN denotes over
T17387 55-65 NN denotes expression
T17388 66-68 IN denotes of
T17389 69-75 NNP denotes ICAM-1
T17390 76-79 CC denotes and
T17391 80-85 NNP denotes TNF-α
T17392 86-91 IN denotes after
T17393 92-103 NN denotes stimulation
T17394 104-106 IN denotes of
T17395 107-116 NNS denotes monocytes
T17396 117-121 IN denotes with
T17397 122-123 CD denotes 1
T17398 124-127 NN denotes g/l
T17399 128-130 IN denotes of
T17400 131-139 JJ denotes degraded
T17401 140-143 NNP denotes CGN
T17402 143-144 . denotes .
T17403 145-152 JJ denotes β-actin
T17404 153-163 NN denotes expression
T17405 164-167 VBD denotes was
T17406 168-172 VBN denotes used
T17407 173-175 IN denotes as
T17408 176-189 NN denotes normalization
T17409 190-194 NN denotes gene
T17410 194-195 . denotes .
R14877 T17380 T17380 ROOT Representative,Representative
R14878 T17381 T17380 dobj samples,Representative
R14879 T17382 T17381 prep of,samples
R14880 T17383 T17384 amod RT-PCR,analysis
R14881 T17384 T17382 pobj analysis,of
R14882 T17385 T17384 acl showing,analysis
R14883 T17386 T17385 prep over,showing
R14884 T17387 T17386 pobj expression,over
R14885 T17388 T17387 prep of,expression
R14886 T17389 T17388 pobj ICAM-1,of
R14887 T17390 T17389 cc and,ICAM-1
R14888 T17391 T17389 conj TNF-α,ICAM-1
R14889 T17392 T17385 prep after,showing
R14890 T17393 T17392 pobj stimulation,after
R14891 T17394 T17393 prep of,stimulation
R14892 T17395 T17394 pobj monocytes,of
R14893 T17396 T17380 prep with,Representative
R14894 T17397 T17398 nummod 1,g/l
R14895 T17398 T17396 pobj g/l,with
R14896 T17399 T17398 prep of,g/l
R14897 T17400 T17401 amod degraded,CGN
R14898 T17401 T17399 pobj CGN,of
R14899 T17402 T17380 punct .,Representative
R14900 T17403 T17404 amod β-actin,expression
R14901 T17404 T17406 nsubjpass expression,used
R14902 T17405 T17406 auxpass was,used
R14903 T17406 T17406 ROOT used,used
R14904 T17407 T17406 prep as,used
R14905 T17408 T17409 compound normalization,gene
R14906 T17409 T17407 pobj gene,as
R14907 T17410 T17406 punct .,used

sentences

Id Subject Object Predicate Lexical cue
T17322 0-195 Sentence denotes Representative samples of RT-PCR analysis showing over expression of ICAM-1 and TNF-α after stimulation of monocytes with 1 g/l of degraded CGN. β-actin expression was used as normalization gene.
T225 0-195 Sentence denotes Representative samples of RT-PCR analysis showing over expression of ICAM-1 and TNF-α after stimulation of monocytes with 1 g/l of degraded CGN. β-actin expression was used as normalization gene.

events-check-again

Id Subject Object Predicate Lexical cue
T17448 55-65 Gene_expression denotes expression
T17449 55-65 Gene_expression denotes expression
T17450 69-75 Protein denotes ICAM-1
T17451 80-85 Protein denotes TNF-α
T17452 145-152 Protein denotes β-actin
T17453 153-163 Gene_expression denotes expression
R14926 T17450 T17448 themeOf ICAM-1,expression
R14927 T17451 T17449 themeOf TNF-α,expression
R14928 T17452 T17453 themeOf β-actin,expression

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T17462 69-75 Protein denotes ICAM-1
T17463 80-85 Protein denotes TNF-α
T17464 140-143 Protein denotes CGN
T17465 145-152 Protein denotes β-actin
T17466 55-65 Gene_expression denotes expression
T17467 55-65 Gene_expression denotes expression
T17468 153-163 Gene_expression denotes expression
T17469 153-163 Gene_expression denotes expression
R14936 T17462 T17466 themeOf ICAM-1,expression
R14937 T17463 T17467 themeOf TNF-α,expression
R14938 T17464 T17468 themeOf CGN,expression
R14939 T17465 T17469 themeOf β-actin,expression

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T17315 55-65 Gene_expression denotes expression
T17316 55-65 Gene_expression denotes expression
T17317 69-75 Protein denotes ICAM-1
T17318 80-85 Protein denotes TNF-α
T17319 145-152 Protein denotes β-actin
T17320 153-163 Gene_expression denotes expression
R14825 T17317 T17315 themeOf ICAM-1,expression
R14826 T17318 T17316 themeOf TNF-α,expression
R14827 T17319 T17320 themeOf β-actin,expression

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T17365 69-75 P05362 denotes ICAM-1
T17366 80-83 P01375 denotes TNF
T17367 80-85 P01375 denotes TNF-α
T17368 145-152 P60709 denotes β-actin

test2

Id Subject Object Predicate Lexical cue
T17304 55-65 Gene_expression denotes expression
T17305 69-75 Protein denotes ICAM-1
T17306 80-85 Protein denotes TNF-α
T17307 145-152 Protein denotes β-actin
T17308 153-163 Gene_expression denotes expression
R14818 T17305 T17304 themeOf ICAM-1,expression
R14819 T17306 T17304 themeOf TNF-α,expression
R14820 T17307 T17308 themeOf β-actin,expression