
PMC:2800179 / 25567-25762
Annnotations
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17417 | 26-28 | http://purl.obolibrary.org/obo/GO_0003964 | denotes | RT |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17414 | 131-139 | http://purl.obolibrary.org/obo/GO_0009056 | denotes | degraded |
T17416 | 26-28 | http://purl.obolibrary.org/obo/GO_0003964 | denotes | RT |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17333 | 0-14 | JJ | denotes | Representative |
T17334 | 15-22 | NN | denotes | samples |
T17335 | 23-25 | IN | denotes | of |
T17336 | 26-32 | NN | denotes | RT-PCR |
T17337 | 33-41 | NN | denotes | analysis |
T17338 | 42-49 | VB | denotes | showing |
T17339 | 50-54 | IN | denotes | over |
T17340 | 55-65 | NN | denotes | expression |
T17341 | 66-68 | IN | denotes | of |
T17342 | 69-75 | NN | denotes | ICAM-1 |
T17343 | 76-79 | CC | denotes | and |
T17344 | 80-85 | NN | denotes | TNF-α |
T17345 | 86-91 | IN | denotes | after |
T17346 | 92-103 | NN | denotes | stimulation |
T17347 | 104-106 | IN | denotes | of |
T17348 | 107-116 | NN | denotes | monocytes |
T17349 | 117-121 | IN | denotes | with |
T17350 | 122-123 | CD | denotes | 1 |
T17351 | 124-127 | NN | denotes | g/l |
T17352 | 128-130 | IN | denotes | of |
T17353 | 131-139 | VB | denotes | degraded |
T17354 | 140-144 | NNP | denotes | CGN. |
T17355 | 145-152 | NN | denotes | β-actin |
T17356 | 153-163 | NN | denotes | expression |
T17357 | 164-167 | VB | denotes | was |
T17358 | 168-172 | VB | denotes | used |
T17359 | 173-175 | IN | denotes | as |
T17360 | 176-189 | NN | denotes | normalization |
T17361 | 190-194 | NN | denotes | gene |
R14837 | T17334 | T17333 | arg1Of | samples,Representative |
R14838 | T17334 | T17335 | arg1Of | samples,of |
R14839 | T17334 | T17357 | arg1Of | samples,was |
R14840 | T17334 | T17358 | arg2Of | samples,used |
R14841 | T17337 | T17335 | arg2Of | analysis,of |
R14842 | T17337 | T17336 | arg1Of | analysis,RT-PCR |
R14843 | T17337 | T17338 | arg1Of | analysis,showing |
R14844 | T17338 | T17339 | arg1Of | showing,over |
R14845 | T17338 | T17345 | arg1Of | showing,after |
R14846 | T17340 | T17339 | arg2Of | expression,over |
R14847 | T17340 | T17341 | arg1Of | expression,of |
R14848 | T17342 | T17343 | arg1Of | ICAM-1,and |
R14849 | T17343 | T17341 | arg2Of | and,of |
R14850 | T17344 | T17343 | arg2Of | TNF-α,and |
R14851 | T17346 | T17345 | arg2Of | stimulation,after |
R14852 | T17346 | T17347 | arg1Of | stimulation,of |
R14853 | T17346 | T17349 | arg1Of | stimulation,with |
R14854 | T17348 | T17347 | arg2Of | monocytes,of |
R14855 | T17351 | T17349 | arg2Of | g/l,with |
R14856 | T17351 | T17350 | arg1Of | g/l,1 |
R14857 | T17351 | T17352 | arg1Of | g/l,of |
R14858 | T17356 | T17352 | arg2Of | expression,of |
R14859 | T17356 | T17353 | arg2Of | expression,degraded |
R14860 | T17356 | T17354 | arg1Of | expression,CGN. |
R14861 | T17356 | T17355 | arg1Of | expression,β-actin |
R14862 | T17358 | T17357 | arg2Of | used,was |
R14863 | T17358 | T17359 | arg1Of | used,as |
R14864 | T17361 | T17359 | arg2Of | gene,as |
R14865 | T17361 | T17360 | arg1Of | gene,normalization |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17380 | 0-14 | NNP | denotes | Representative |
T17381 | 15-22 | NNS | denotes | samples |
T17382 | 23-25 | IN | denotes | of |
T17383 | 26-32 | NN | denotes | RT-PCR |
T17384 | 33-41 | NN | denotes | analysis |
T17385 | 42-49 | VBG | denotes | showing |
T17386 | 50-54 | IN | denotes | over |
T17387 | 55-65 | NN | denotes | expression |
T17388 | 66-68 | IN | denotes | of |
T17389 | 69-75 | NNP | denotes | ICAM-1 |
T17390 | 76-79 | CC | denotes | and |
T17391 | 80-85 | NNP | denotes | TNF-α |
T17392 | 86-91 | IN | denotes | after |
T17393 | 92-103 | NN | denotes | stimulation |
T17394 | 104-106 | IN | denotes | of |
T17395 | 107-116 | NNS | denotes | monocytes |
T17396 | 117-121 | IN | denotes | with |
T17397 | 122-123 | CD | denotes | 1 |
T17398 | 124-127 | NN | denotes | g/l |
T17399 | 128-130 | IN | denotes | of |
T17400 | 131-139 | JJ | denotes | degraded |
T17401 | 140-143 | NNP | denotes | CGN |
T17402 | 143-144 | . | denotes | . |
T17403 | 145-152 | JJ | denotes | β-actin |
T17404 | 153-163 | NN | denotes | expression |
T17405 | 164-167 | VBD | denotes | was |
T17406 | 168-172 | VBN | denotes | used |
T17407 | 173-175 | IN | denotes | as |
T17408 | 176-189 | NN | denotes | normalization |
T17409 | 190-194 | NN | denotes | gene |
T17410 | 194-195 | . | denotes | . |
R14877 | T17380 | T17380 | ROOT | Representative,Representative |
R14878 | T17381 | T17380 | dobj | samples,Representative |
R14879 | T17382 | T17381 | prep | of,samples |
R14880 | T17383 | T17384 | amod | RT-PCR,analysis |
R14881 | T17384 | T17382 | pobj | analysis,of |
R14882 | T17385 | T17384 | acl | showing,analysis |
R14883 | T17386 | T17385 | prep | over,showing |
R14884 | T17387 | T17386 | pobj | expression,over |
R14885 | T17388 | T17387 | prep | of,expression |
R14886 | T17389 | T17388 | pobj | ICAM-1,of |
R14887 | T17390 | T17389 | cc | and,ICAM-1 |
R14888 | T17391 | T17389 | conj | TNF-α,ICAM-1 |
R14889 | T17392 | T17385 | prep | after,showing |
R14890 | T17393 | T17392 | pobj | stimulation,after |
R14891 | T17394 | T17393 | prep | of,stimulation |
R14892 | T17395 | T17394 | pobj | monocytes,of |
R14893 | T17396 | T17380 | prep | with,Representative |
R14894 | T17397 | T17398 | nummod | 1,g/l |
R14895 | T17398 | T17396 | pobj | g/l,with |
R14896 | T17399 | T17398 | prep | of,g/l |
R14897 | T17400 | T17401 | amod | degraded,CGN |
R14898 | T17401 | T17399 | pobj | CGN,of |
R14899 | T17402 | T17380 | punct | .,Representative |
R14900 | T17403 | T17404 | amod | β-actin,expression |
R14901 | T17404 | T17406 | nsubjpass | expression,used |
R14902 | T17405 | T17406 | auxpass | was,used |
R14903 | T17406 | T17406 | ROOT | used,used |
R14904 | T17407 | T17406 | prep | as,used |
R14905 | T17408 | T17409 | compound | normalization,gene |
R14906 | T17409 | T17407 | pobj | gene,as |
R14907 | T17410 | T17406 | punct | .,used |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17322 | 0-195 | Sentence | denotes | Representative samples of RT-PCR analysis showing over expression of ICAM-1 and TNF-α after stimulation of monocytes with 1 g/l of degraded CGN. β-actin expression was used as normalization gene. |
T225 | 0-195 | Sentence | denotes | Representative samples of RT-PCR analysis showing over expression of ICAM-1 and TNF-α after stimulation of monocytes with 1 g/l of degraded CGN. β-actin expression was used as normalization gene. |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17448 | 55-65 | Gene_expression | denotes | expression |
T17449 | 55-65 | Gene_expression | denotes | expression |
T17450 | 69-75 | Protein | denotes | ICAM-1 |
T17451 | 80-85 | Protein | denotes | TNF-α |
T17452 | 145-152 | Protein | denotes | β-actin |
T17453 | 153-163 | Gene_expression | denotes | expression |
R14926 | T17450 | T17448 | themeOf | ICAM-1,expression |
R14927 | T17451 | T17449 | themeOf | TNF-α,expression |
R14928 | T17452 | T17453 | themeOf | β-actin,expression |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17462 | 69-75 | Protein | denotes | ICAM-1 |
T17463 | 80-85 | Protein | denotes | TNF-α |
T17464 | 140-143 | Protein | denotes | CGN |
T17465 | 145-152 | Protein | denotes | β-actin |
T17466 | 55-65 | Gene_expression | denotes | expression |
T17467 | 55-65 | Gene_expression | denotes | expression |
T17468 | 153-163 | Gene_expression | denotes | expression |
T17469 | 153-163 | Gene_expression | denotes | expression |
R14936 | T17462 | T17466 | themeOf | ICAM-1,expression |
R14937 | T17463 | T17467 | themeOf | TNF-α,expression |
R14938 | T17464 | T17468 | themeOf | CGN,expression |
R14939 | T17465 | T17469 | themeOf | β-actin,expression |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17315 | 55-65 | Gene_expression | denotes | expression |
T17316 | 55-65 | Gene_expression | denotes | expression |
T17317 | 69-75 | Protein | denotes | ICAM-1 |
T17318 | 80-85 | Protein | denotes | TNF-α |
T17319 | 145-152 | Protein | denotes | β-actin |
T17320 | 153-163 | Gene_expression | denotes | expression |
R14825 | T17317 | T17315 | themeOf | ICAM-1,expression |
R14826 | T17318 | T17316 | themeOf | TNF-α,expression |
R14827 | T17319 | T17320 | themeOf | β-actin,expression |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17365 | 69-75 | P05362 | denotes | ICAM-1 |
T17366 | 80-83 | P01375 | denotes | TNF |
T17367 | 80-85 | P01375 | denotes | TNF-α |
T17368 | 145-152 | P60709 | denotes | β-actin |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17304 | 55-65 | Gene_expression | denotes | expression |
T17305 | 69-75 | Protein | denotes | ICAM-1 |
T17306 | 80-85 | Protein | denotes | TNF-α |
T17307 | 145-152 | Protein | denotes | β-actin |
T17308 | 153-163 | Gene_expression | denotes | expression |
R14818 | T17305 | T17304 | themeOf | ICAM-1,expression |
R14819 | T17306 | T17304 | themeOf | TNF-α,expression |
R14820 | T17307 | T17308 | themeOf | β-actin,expression |