PMC:2800179 / 25160-25296 JSONTXT

Annnotations TAB JSON ListView MergeView

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T9779","span":{"begin":46,"end":62},"obj":"http://purl.obolibrary.org/obo/GO_0032680"},{"id":"T9780","span":{"begin":46,"end":62},"obj":"http://purl.obolibrary.org/obo/GO_0032640"}],"text":"The increase in surface ICAM-1 expression and TNF-α production by monocytes correlated with an upregulation of mRNA for these molecules."}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T9646","span":{"begin":0,"end":3},"obj":"DT"},{"id":"T9647","span":{"begin":4,"end":12},"obj":"NN"},{"id":"T9648","span":{"begin":13,"end":15},"obj":"IN"},{"id":"T9649","span":{"begin":16,"end":23},"obj":"NN"},{"id":"T9650","span":{"begin":24,"end":30},"obj":"NN"},{"id":"T9651","span":{"begin":31,"end":41},"obj":"NN"},{"id":"T9652","span":{"begin":42,"end":45},"obj":"CC"},{"id":"T9653","span":{"begin":46,"end":51},"obj":"NN"},{"id":"T9654","span":{"begin":52,"end":62},"obj":"NN"},{"id":"T9655","span":{"begin":63,"end":65},"obj":"IN"},{"id":"T9656","span":{"begin":66,"end":75},"obj":"NN"},{"id":"T9657","span":{"begin":76,"end":86},"obj":"VB"},{"id":"T9658","span":{"begin":87,"end":91},"obj":"IN"},{"id":"T9659","span":{"begin":92,"end":94},"obj":"DT"},{"id":"T9660","span":{"begin":95,"end":107},"obj":"NN"},{"id":"T9661","span":{"begin":108,"end":110},"obj":"IN"},{"id":"T9662","span":{"begin":111,"end":115},"obj":"NN"},{"id":"T9663","span":{"begin":116,"end":119},"obj":"IN"},{"id":"T9664","span":{"begin":120,"end":125},"obj":"DT"},{"id":"T9665","span":{"begin":126,"end":135},"obj":"NN"}],"relations":[{"id":"R8456","pred":"arg1Of","subj":"T9647","obj":"T9646"},{"id":"R8457","pred":"arg1Of","subj":"T9647","obj":"T9648"},{"id":"R8458","pred":"arg1Of","subj":"T9647","obj":"T9657"},{"id":"R8459","pred":"arg1Of","subj":"T9651","obj":"T9649"},{"id":"R8460","pred":"arg1Of","subj":"T9651","obj":"T9650"},{"id":"R8461","pred":"arg1Of","subj":"T9651","obj":"T9652"},{"id":"R8462","pred":"arg2Of","subj":"T9652","obj":"T9648"},{"id":"R8463","pred":"arg1Of","subj":"T9652","obj":"T9655"},{"id":"R8464","pred":"arg2Of","subj":"T9654","obj":"T9652"},{"id":"R8465","pred":"arg1Of","subj":"T9654","obj":"T9653"},{"id":"R8466","pred":"arg2Of","subj":"T9656","obj":"T9655"},{"id":"R8467","pred":"arg1Of","subj":"T9657","obj":"T9658"},{"id":"R8468","pred":"arg2Of","subj":"T9660","obj":"T9658"},{"id":"R8469","pred":"arg1Of","subj":"T9660","obj":"T9659"},{"id":"R8470","pred":"arg1Of","subj":"T9660","obj":"T9661"},{"id":"R8471","pred":"arg2Of","subj":"T9662","obj":"T9661"},{"id":"R8472","pred":"arg1Of","subj":"T9662","obj":"T9663"},{"id":"R8473","pred":"arg2Of","subj":"T9665","obj":"T9663"},{"id":"R8474","pred":"arg1Of","subj":"T9665","obj":"T9664"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"The increase in surface ICAM-1 expression and TNF-α production by monocytes correlated with an upregulation of mRNA for these molecules."}

    bionlp-st-ge-2016-coref

    {"project":"bionlp-st-ge-2016-coref","denotations":[{"id":"T9697","span":{"begin":120,"end":135},"obj":"Anaphor"},{"id":"T9698","span":{"begin":24,"end":30},"obj":"Antecedent"},{"id":"T9699","span":{"begin":46,"end":51},"obj":"Antecedent"}],"relations":[{"id":"R8507","pred":"boundBy","subj":"T9697","obj":"T9698"},{"id":"R8508","pred":"boundBy","subj":"T9697","obj":"T9699"}],"namespaces":[{"prefix":"_base","uri":"https://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"The increase in surface ICAM-1 expression and TNF-α production by monocytes correlated with an upregulation of mRNA for these molecules."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T9721","span":{"begin":0,"end":3},"obj":"NNP"},{"id":"T9722","span":{"begin":4,"end":12},"obj":"NN"},{"id":"T9723","span":{"begin":13,"end":15},"obj":"IN"},{"id":"T9724","span":{"begin":16,"end":23},"obj":"NN"},{"id":"T9725","span":{"begin":24,"end":30},"obj":"NN"},{"id":"T9726","span":{"begin":31,"end":41},"obj":"NN"},{"id":"T9727","span":{"begin":42,"end":45},"obj":"CC"},{"id":"T9728","span":{"begin":46,"end":51},"obj":"JJ"},{"id":"T9729","span":{"begin":52,"end":62},"obj":"NN"},{"id":"T9730","span":{"begin":63,"end":65},"obj":"IN"},{"id":"T9731","span":{"begin":66,"end":75},"obj":"NNS"},{"id":"T9732","span":{"begin":76,"end":86},"obj":"VBN"},{"id":"T9733","span":{"begin":87,"end":91},"obj":"IN"},{"id":"T9734","span":{"begin":92,"end":94},"obj":"DT"},{"id":"T9735","span":{"begin":95,"end":107},"obj":"NN"},{"id":"T9736","span":{"begin":108,"end":110},"obj":"IN"},{"id":"T9737","span":{"begin":111,"end":115},"obj":"NNP"},{"id":"T9738","span":{"begin":116,"end":119},"obj":"IN"},{"id":"T9739","span":{"begin":120,"end":125},"obj":"DT"},{"id":"T9740","span":{"begin":126,"end":135},"obj":"NNS"},{"id":"T9741","span":{"begin":135,"end":136},"obj":"."}],"relations":[{"id":"R8520","pred":"det","subj":"T9721","obj":"T9722"},{"id":"R8522","pred":"prep","subj":"T9723","obj":"T9722"},{"id":"R8523","pred":"nmod","subj":"T9724","obj":"T9726"},{"id":"R8524","pred":"compound","subj":"T9725","obj":"T9726"},{"id":"R8525","pred":"pobj","subj":"T9726","obj":"T9723"},{"id":"R8526","pred":"cc","subj":"T9727","obj":"T9726"},{"id":"R8527","pred":"amod","subj":"T9728","obj":"T9729"},{"id":"R8528","pred":"conj","subj":"T9729","obj":"T9726"},{"id":"R8529","pred":"prep","subj":"T9730","obj":"T9722"},{"id":"R8530","pred":"pobj","subj":"T9731","obj":"T9730"},{"id":"R8531","pred":"acl","subj":"T9732","obj":"T9731"},{"id":"R8532","pred":"prep","subj":"T9733","obj":"T9732"},{"id":"R8533","pred":"det","subj":"T9734","obj":"T9735"},{"id":"R8534","pred":"pobj","subj":"T9735","obj":"T9733"},{"id":"R8535","pred":"prep","subj":"T9736","obj":"T9735"},{"id":"R8536","pred":"pobj","subj":"T9737","obj":"T9736"},{"id":"R8537","pred":"prep","subj":"T9738","obj":"T9735"},{"id":"R8538","pred":"det","subj":"T9739","obj":"T9740"},{"id":"R8539","pred":"pobj","subj":"T9740","obj":"T9738"}],"text":"The increase in surface ICAM-1 expression and TNF-α production by monocytes correlated with an upregulation of mRNA for these molecules."}

    sentences

    {"project":"sentences","denotations":[{"id":"T9633","span":{"begin":0,"end":136},"obj":"Sentence"},{"id":"T222","span":{"begin":0,"end":136},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"The increase in surface ICAM-1 expression and TNF-α production by monocytes correlated with an upregulation of mRNA for these molecules."}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T9837","span":{"begin":4,"end":12},"obj":"Positive_regulation"},{"id":"T9838","span":{"begin":4,"end":12},"obj":"Positive_regulation"},{"id":"T9839","span":{"begin":24,"end":30},"obj":"Protein"},{"id":"T9840","span":{"begin":31,"end":41},"obj":"Gene_expression"},{"id":"T9841","span":{"begin":46,"end":51},"obj":"Protein"},{"id":"T9842","span":{"begin":52,"end":62},"obj":"Gene_expression"},{"id":"T9843","span":{"begin":95,"end":107},"obj":"Positive_regulation"},{"id":"T9844","span":{"begin":95,"end":107},"obj":"Positive_regulation"}],"relations":[{"id":"R8614","pred":"themeOf","subj":"T9839","obj":"T9840"},{"id":"R8615","pred":"themeOf","subj":"T9839","obj":"T9844"},{"id":"R8616","pred":"themeOf","subj":"T9840","obj":"T9838"},{"id":"R8617","pred":"themeOf","subj":"T9841","obj":"T9842"},{"id":"R8618","pred":"themeOf","subj":"T9841","obj":"T9843"},{"id":"R8619","pred":"themeOf","subj":"T9842","obj":"T9837"}],"text":"The increase in surface ICAM-1 expression and TNF-α production by monocytes correlated with an upregulation of mRNA for these molecules."}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T9859","span":{"begin":16,"end":30},"obj":"Protein"},{"id":"T9860","span":{"begin":46,"end":51},"obj":"Protein"},{"id":"T9861","span":{"begin":31,"end":41},"obj":"Gene_expression"},{"id":"T9862","span":{"begin":52,"end":62},"obj":"Gene_expression"},{"id":"T9863","span":{"begin":4,"end":12},"obj":"Positive_regulation"},{"id":"T9864","span":{"begin":4,"end":12},"obj":"Positive_regulation"}],"relations":[{"id":"R8629","pred":"themeOf","subj":"T9859","obj":"T9861"},{"id":"R8630","pred":"themeOf","subj":"T9860","obj":"T9862"},{"id":"R8631","pred":"themeOf","subj":"T9861","obj":"T9863"},{"id":"R8632","pred":"themeOf","subj":"T9862","obj":"T9864"}],"text":"The increase in surface ICAM-1 expression and TNF-α production by monocytes correlated with an upregulation of mRNA for these molecules."}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T9619","span":{"begin":31,"end":41},"obj":"Gene_expression"},{"id":"T9620","span":{"begin":46,"end":51},"obj":"Protein"},{"id":"T9621","span":{"begin":52,"end":62},"obj":"Gene_expression"},{"id":"T9622","span":{"begin":95,"end":107},"obj":"Positive_regulation"},{"id":"T9616","span":{"begin":4,"end":12},"obj":"Positive_regulation"},{"id":"T9617","span":{"begin":4,"end":12},"obj":"Positive_regulation"},{"id":"T9618","span":{"begin":24,"end":30},"obj":"Protein"},{"id":"T9623","span":{"begin":95,"end":107},"obj":"Positive_regulation"}],"relations":[{"id":"R8435","pred":"themeOf","subj":"T9618","obj":"T9619"},{"id":"R8436","pred":"themeOf","subj":"T9618","obj":"T9623"},{"id":"R8437","pred":"themeOf","subj":"T9619","obj":"T9617"},{"id":"R8438","pred":"themeOf","subj":"T9620","obj":"T9621"},{"id":"R8439","pred":"themeOf","subj":"T9620","obj":"T9622"},{"id":"R8440","pred":"themeOf","subj":"T9621","obj":"T9616"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"The increase in surface ICAM-1 expression and TNF-α production by monocytes correlated with an upregulation of mRNA for these molecules."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T9703","span":{"begin":24,"end":30},"obj":"P05362"},{"id":"T9704","span":{"begin":46,"end":49},"obj":"P01375"},{"id":"T9705","span":{"begin":46,"end":51},"obj":"P01375"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"The increase in surface ICAM-1 expression and TNF-α production by monocytes correlated with an upregulation of mRNA for these molecules."}