PMC:2800179 / 18645-18795
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7461 | 0-7 | RB | denotes | However |
T7462 | 7-8 | -COMMA- | denotes | , |
T7463 | 9-12 | DT | denotes | the |
T7464 | 13-19 | NN | denotes | amount |
T7465 | 20-22 | IN | denotes | of |
T7466 | 23-28 | NN | denotes | TNF-α |
T7467 | 29-37 | VB | denotes | produced |
T7468 | 38-40 | IN | denotes | by |
T7469 | 41-44 | NN | denotes | LPS |
T7470 | 45-48 | VB | denotes | was |
T7471 | 49-55 | RB | denotes | 4-fold |
T7472 | 56-60 | JJ | denotes | less |
T7473 | 61-65 | IN | denotes | than |
T7474 | 66-69 | DT | denotes | the |
T7475 | 70-73 | NN | denotes | one |
T7476 | 74-82 | VB | denotes | produced |
T7477 | 83-85 | IN | denotes | by |
T7478 | 86-90 | NN | denotes | dCGN |
T7479 | 91-94 | CC | denotes | and |
T7480 | 95-97 | PRP | denotes | it |
T7481 | 98-101 | VB | denotes | was |
T7482 | 102-105 | RB | denotes | not |
T7483 | 106-114 | VB | denotes | detected |
T7484 | 115-120 | IN | denotes | after |
T7485 | 121-122 | CD | denotes | 8 |
T7486 | 123-128 | NN | denotes | hours |
T7487 | 129-131 | IN | denotes | of |
T7488 | 132-139 | NN | denotes | culture |
T7489 | 140-141 | -LRB- | denotes | ( |
T7490 | 141-145 | NN | denotes | Fig. |
T7491 | 146-148 | NN | denotes | 2B |
T7492 | 148-149 | -RRB- | denotes | ) |
R6612 | T7464 | T7463 | arg1Of | amount,the |
R6613 | T7464 | T7465 | arg1Of | amount,of |
R6614 | T7464 | T7470 | arg1Of | amount,was |
R6615 | T7464 | T7472 | arg1Of | amount,less |
R6616 | T7466 | T7465 | arg2Of | TNF-α,of |
R6617 | T7466 | T7467 | arg2Of | TNF-α,produced |
R6618 | T7469 | T7467 | arg1Of | LPS,produced |
R6619 | T7469 | T7468 | arg2Of | LPS,by |
R6620 | T7470 | T7479 | arg1Of | was,and |
R6621 | T7472 | T7470 | arg2Of | less,was |
R6622 | T7472 | T7471 | arg1Of | less,4-fold |
R6623 | T7472 | T7473 | arg1Of | less,than |
R6624 | T7475 | T7473 | arg2Of | one,than |
R6625 | T7475 | T7474 | arg1Of | one,the |
R6626 | T7475 | T7476 | arg2Of | one,produced |
R6627 | T7478 | T7476 | arg1Of | dCGN,produced |
R6628 | T7478 | T7477 | arg2Of | dCGN,by |
R6629 | T7479 | T7461 | arg1Of | and,However |
R6630 | T7479 | T7462 | arg1Of | and,"," |
R6631 | T7480 | T7481 | arg1Of | it,was |
R6632 | T7480 | T7483 | arg2Of | it,detected |
R6633 | T7483 | T7479 | arg2Of | detected,and |
R6634 | T7483 | T7481 | arg2Of | detected,was |
R6635 | T7483 | T7482 | arg1Of | detected,not |
R6636 | T7483 | T7484 | arg1Of | detected,after |
R6637 | T7486 | T7484 | arg2Of | hours,after |
R6638 | T7486 | T7485 | arg1Of | hours,8 |
R6639 | T7486 | T7487 | arg1Of | hours,of |
R6640 | T7488 | T7487 | arg2Of | culture,of |
R6641 | T7488 | T7489 | arg1Of | culture,( |
R6642 | T7491 | T7489 | arg2Of | 2B,( |
R6643 | T7491 | T7490 | arg1Of | 2B,Fig. |
R6644 | T7492 | T7489 | arg3Of | ),( |
bionlp-st-ge-2016-coref
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7626 | 23-28 | Antecedent | denotes | TNF-α |
T7625 | 66-73 | Anaphor | denotes | the one |
R6774 | T7625 | T7626 | boundBy | the one,TNF-α |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7840 | 0-7 | RB | denotes | However |
T7841 | 7-8 | , | denotes | , |
T7842 | 9-12 | DT | denotes | the |
T7843 | 13-19 | NN | denotes | amount |
T7844 | 20-22 | IN | denotes | of |
T7845 | 23-28 | JJ | denotes | TNF-α |
T7846 | 29-37 | VBN | denotes | produced |
T7847 | 38-40 | IN | denotes | by |
T7848 | 41-44 | NNP | denotes | LPS |
T7849 | 45-48 | VBD | denotes | was |
T7850 | 49-55 | JJ | denotes | 4-fold |
T7851 | 56-60 | JJR | denotes | less |
T7852 | 61-65 | IN | denotes | than |
T7853 | 66-69 | DT | denotes | the |
T7854 | 70-73 | CD | denotes | one |
T7855 | 74-82 | VBN | denotes | produced |
T7856 | 83-85 | IN | denotes | by |
T7857 | 86-90 | NNP | denotes | dCGN |
T7858 | 91-94 | CC | denotes | and |
T7859 | 95-97 | PRP | denotes | it |
T7860 | 98-101 | VBD | denotes | was |
T7861 | 102-105 | RB | denotes | not |
T7862 | 106-114 | VBN | denotes | detected |
T7863 | 115-120 | IN | denotes | after |
T7864 | 121-122 | CD | denotes | 8 |
T7865 | 123-128 | NNS | denotes | hours |
T7866 | 129-131 | IN | denotes | of |
T7867 | 132-139 | NN | denotes | culture |
T7868 | 140-141 | -LRB- | denotes | ( |
T7869 | 141-145 | NNP | denotes | Fig. |
T7870 | 146-148 | NNP | denotes | 2B |
T7871 | 148-149 | -RRB- | denotes | ) |
T7872 | 149-150 | . | denotes | . |
R6958 | T7840 | T7849 | advmod | However,was |
R6959 | T7841 | T7849 | punct | ",",was |
R6960 | T7842 | T7843 | det | the,amount |
R6961 | T7843 | T7849 | nsubj | amount,was |
R6962 | T7844 | T7843 | prep | of,amount |
R6963 | T7845 | T7844 | pobj | TNF-α,of |
R6964 | T7846 | T7845 | acl | produced,TNF-α |
R6965 | T7847 | T7846 | agent | by,produced |
R6966 | T7848 | T7847 | pobj | LPS,by |
R6967 | T7849 | T7849 | ROOT | was,was |
R6968 | T7850 | T7851 | npadvmod | 4-fold,less |
R6969 | T7851 | T7849 | acomp | less,was |
R6970 | T7852 | T7851 | prep | than,less |
R6971 | T7853 | T7854 | det | the,one |
R6972 | T7854 | T7852 | pobj | one,than |
R6973 | T7855 | T7854 | acl | produced,one |
R6974 | T7856 | T7855 | agent | by,produced |
R6975 | T7857 | T7856 | pobj | dCGN,by |
R6976 | T7858 | T7849 | cc | and,was |
R6977 | T7859 | T7862 | nsubjpass | it,detected |
R6978 | T7860 | T7862 | auxpass | was,detected |
R6979 | T7861 | T7862 | neg | not,detected |
R6980 | T7862 | T7849 | conj | detected,was |
R6981 | T7863 | T7862 | prep | after,detected |
R6982 | T7864 | T7865 | nummod | 8,hours |
R6983 | T7865 | T7863 | pobj | hours,after |
R6984 | T7866 | T7865 | prep | of,hours |
R6985 | T7867 | T7866 | pobj | culture,of |
R6986 | T7868 | T7865 | punct | (,hours |
R6987 | T7869 | T7870 | compound | Fig.,2B |
R6988 | T7870 | T7865 | appos | 2B,hours |
R6989 | T7871 | T7865 | punct | ),hours |
R6990 | T7872 | T7862 | punct | .,detected |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7279 | 0-150 | Sentence | denotes | However, the amount of TNF-α produced by LPS was 4-fold less than the one produced by dCGN and it was not detected after 8 hours of culture (Fig. 2B). |
T161 | 0-150 | Sentence | denotes | However, the amount of TNF-α produced by LPS was 4-fold less than the one produced by dCGN and it was not detected after 8 hours of culture (Fig. 2B). |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8167 | 23-28 | Protein | denotes | TNF-α |
T8168 | 29-37 | Gene_expression | denotes | produced |
T8169 | 38-40 | Positive_regulation | denotes | by |
T8170 | 74-82 | Gene_expression | denotes | produced |
T8171 | 83-85 | Positive_regulation | denotes | by |
R7202 | T8167 | T8168 | themeOf | TNF-α,produced |
R7203 | T8167 | T8170 | themeOf | TNF-α,produced |
R7204 | T8168 | T8169 | themeOf | produced,by |
R7205 | T8170 | T8171 | themeOf | produced,by |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8209 | 23-28 | Protein | denotes | TNF-α |
T8210 | 29-37 | Gene_expression | denotes | produced |
R7229 | T8209 | T8210 | themeOf | TNF-α,produced |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7252 | 23-28 | Protein | denotes | TNF-α |
T7253 | 29-37 | Gene_expression | denotes | produced |
T7254 | 38-40 | Positive_regulation | denotes | by |
T7255 | 74-82 | Gene_expression | denotes | produced |
T7256 | 83-85 | Positive_regulation | denotes | by |
R6432 | T7255 | T7256 | themeOf | produced,by |
R6429 | T7252 | T7253 | themeOf | TNF-α,produced |
R6430 | T7252 | T7255 | themeOf | TNF-α,produced |
R6431 | T7253 | T7254 | themeOf | produced,by |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7645 | 23-26 | P01375 | denotes | TNF |
T7646 | 23-28 | P01375 | denotes | TNF-α |
test2
Id | Subject | Object | Predicate | Lexical cue | Negation |
---|---|---|---|---|---|
T7209 | 23-28 | Protein | denotes | TNF-α | |
T7210 | 29-37 | Gene_expression | denotes | produced | true |
T7211 | 74-82 | Gene_expression | denotes | produced | |
T7212 | 106-114 | Localization | denotes | detected | true |
R6402 | T7209 | T7212 | themeOf | TNF-α,detected | |
R6403 | T7209 | T7210 | themeOf | TNF-α,produced | |
R6404 | T7209 | T7211 | themeOf | TNF-α,produced |