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PMC:2800179 / 18645-18795 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T7461 0-7 RB denotes However
T7462 7-8 -COMMA- denotes ,
T7463 9-12 DT denotes the
T7464 13-19 NN denotes amount
T7465 20-22 IN denotes of
T7466 23-28 NN denotes TNF-α
T7467 29-37 VB denotes produced
T7468 38-40 IN denotes by
T7469 41-44 NN denotes LPS
T7470 45-48 VB denotes was
T7471 49-55 RB denotes 4-fold
T7472 56-60 JJ denotes less
T7473 61-65 IN denotes than
T7474 66-69 DT denotes the
T7475 70-73 NN denotes one
T7476 74-82 VB denotes produced
T7477 83-85 IN denotes by
T7478 86-90 NN denotes dCGN
T7479 91-94 CC denotes and
T7480 95-97 PRP denotes it
T7481 98-101 VB denotes was
T7482 102-105 RB denotes not
T7483 106-114 VB denotes detected
T7484 115-120 IN denotes after
T7485 121-122 CD denotes 8
T7486 123-128 NN denotes hours
T7487 129-131 IN denotes of
T7488 132-139 NN denotes culture
T7489 140-141 -LRB- denotes (
T7490 141-145 NN denotes Fig.
T7491 146-148 NN denotes 2B
T7492 148-149 -RRB- denotes )
R6612 T7464 T7463 arg1Of amount,the
R6613 T7464 T7465 arg1Of amount,of
R6614 T7464 T7470 arg1Of amount,was
R6615 T7464 T7472 arg1Of amount,less
R6616 T7466 T7465 arg2Of TNF-α,of
R6617 T7466 T7467 arg2Of TNF-α,produced
R6618 T7469 T7467 arg1Of LPS,produced
R6619 T7469 T7468 arg2Of LPS,by
R6620 T7470 T7479 arg1Of was,and
R6621 T7472 T7470 arg2Of less,was
R6622 T7472 T7471 arg1Of less,4-fold
R6623 T7472 T7473 arg1Of less,than
R6624 T7475 T7473 arg2Of one,than
R6625 T7475 T7474 arg1Of one,the
R6626 T7475 T7476 arg2Of one,produced
R6627 T7478 T7476 arg1Of dCGN,produced
R6628 T7478 T7477 arg2Of dCGN,by
R6629 T7479 T7461 arg1Of and,However
R6630 T7479 T7462 arg1Of and,","
R6631 T7480 T7481 arg1Of it,was
R6632 T7480 T7483 arg2Of it,detected
R6633 T7483 T7479 arg2Of detected,and
R6634 T7483 T7481 arg2Of detected,was
R6635 T7483 T7482 arg1Of detected,not
R6636 T7483 T7484 arg1Of detected,after
R6637 T7486 T7484 arg2Of hours,after
R6638 T7486 T7485 arg1Of hours,8
R6639 T7486 T7487 arg1Of hours,of
R6640 T7488 T7487 arg2Of culture,of
R6641 T7488 T7489 arg1Of culture,(
R6642 T7491 T7489 arg2Of 2B,(
R6643 T7491 T7490 arg1Of 2B,Fig.
R6644 T7492 T7489 arg3Of ),(

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T7626 23-28 Antecedent denotes TNF-α
T7625 66-73 Anaphor denotes the one
R6774 T7625 T7626 boundBy the one,TNF-α

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T7840 0-7 RB denotes However
T7841 7-8 , denotes ,
T7842 9-12 DT denotes the
T7843 13-19 NN denotes amount
T7844 20-22 IN denotes of
T7845 23-28 JJ denotes TNF-α
T7846 29-37 VBN denotes produced
T7847 38-40 IN denotes by
T7848 41-44 NNP denotes LPS
T7849 45-48 VBD denotes was
T7850 49-55 JJ denotes 4-fold
T7851 56-60 JJR denotes less
T7852 61-65 IN denotes than
T7853 66-69 DT denotes the
T7854 70-73 CD denotes one
T7855 74-82 VBN denotes produced
T7856 83-85 IN denotes by
T7857 86-90 NNP denotes dCGN
T7858 91-94 CC denotes and
T7859 95-97 PRP denotes it
T7860 98-101 VBD denotes was
T7861 102-105 RB denotes not
T7862 106-114 VBN denotes detected
T7863 115-120 IN denotes after
T7864 121-122 CD denotes 8
T7865 123-128 NNS denotes hours
T7866 129-131 IN denotes of
T7867 132-139 NN denotes culture
T7868 140-141 -LRB- denotes (
T7869 141-145 NNP denotes Fig.
T7870 146-148 NNP denotes 2B
T7871 148-149 -RRB- denotes )
T7872 149-150 . denotes .
R6958 T7840 T7849 advmod However,was
R6959 T7841 T7849 punct ",",was
R6960 T7842 T7843 det the,amount
R6961 T7843 T7849 nsubj amount,was
R6962 T7844 T7843 prep of,amount
R6963 T7845 T7844 pobj TNF-α,of
R6964 T7846 T7845 acl produced,TNF-α
R6965 T7847 T7846 agent by,produced
R6966 T7848 T7847 pobj LPS,by
R6967 T7849 T7849 ROOT was,was
R6968 T7850 T7851 npadvmod 4-fold,less
R6969 T7851 T7849 acomp less,was
R6970 T7852 T7851 prep than,less
R6971 T7853 T7854 det the,one
R6972 T7854 T7852 pobj one,than
R6973 T7855 T7854 acl produced,one
R6974 T7856 T7855 agent by,produced
R6975 T7857 T7856 pobj dCGN,by
R6976 T7858 T7849 cc and,was
R6977 T7859 T7862 nsubjpass it,detected
R6978 T7860 T7862 auxpass was,detected
R6979 T7861 T7862 neg not,detected
R6980 T7862 T7849 conj detected,was
R6981 T7863 T7862 prep after,detected
R6982 T7864 T7865 nummod 8,hours
R6983 T7865 T7863 pobj hours,after
R6984 T7866 T7865 prep of,hours
R6985 T7867 T7866 pobj culture,of
R6986 T7868 T7865 punct (,hours
R6987 T7869 T7870 compound Fig.,2B
R6988 T7870 T7865 appos 2B,hours
R6989 T7871 T7865 punct ),hours
R6990 T7872 T7862 punct .,detected

sentences

Id Subject Object Predicate Lexical cue
T7279 0-150 Sentence denotes However, the amount of TNF-α produced by LPS was 4-fold less than the one produced by dCGN and it was not detected after 8 hours of culture (Fig. 2B).
T161 0-150 Sentence denotes However, the amount of TNF-α produced by LPS was 4-fold less than the one produced by dCGN and it was not detected after 8 hours of culture (Fig. 2B).

events-check-again

Id Subject Object Predicate Lexical cue
T8167 23-28 Protein denotes TNF-α
T8168 29-37 Gene_expression denotes produced
T8169 38-40 Positive_regulation denotes by
T8170 74-82 Gene_expression denotes produced
T8171 83-85 Positive_regulation denotes by
R7202 T8167 T8168 themeOf TNF-α,produced
R7203 T8167 T8170 themeOf TNF-α,produced
R7204 T8168 T8169 themeOf produced,by
R7205 T8170 T8171 themeOf produced,by

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T8209 23-28 Protein denotes TNF-α
T8210 29-37 Gene_expression denotes produced
R7229 T8209 T8210 themeOf TNF-α,produced

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T7252 23-28 Protein denotes TNF-α
T7253 29-37 Gene_expression denotes produced
T7254 38-40 Positive_regulation denotes by
T7255 74-82 Gene_expression denotes produced
T7256 83-85 Positive_regulation denotes by
R6432 T7255 T7256 themeOf produced,by
R6429 T7252 T7253 themeOf TNF-α,produced
R6430 T7252 T7255 themeOf TNF-α,produced
R6431 T7253 T7254 themeOf produced,by

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T7645 23-26 P01375 denotes TNF
T7646 23-28 P01375 denotes TNF-α

test2

Id Subject Object Predicate Lexical cue Negation
T7209 23-28 Protein denotes TNF-α
T7210 29-37 Gene_expression denotes produced true
T7211 74-82 Gene_expression denotes produced
T7212 106-114 Localization denotes detected true
R6402 T7209 T7212 themeOf TNF-α,detected
R6403 T7209 T7210 themeOf TNF-α,produced
R6404 T7209 T7211 themeOf TNF-α,produced