
PMC:2800179 / 1189-1340
Annnotations
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T604 | 84-89 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T589 | 52-61 | http://purl.obolibrary.org/obo/GO_0046903 | denotes | secretion |
T598 | 124-140 | http://purl.obolibrary.org/obo/GO_0051092 | denotes | NF-κB activation |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T274 | 6-13 | RB | denotes | Finally |
T275 | 13-14 | -COMMA- | denotes | , |
T276 | 15-19 | NN | denotes | dCGN |
T277 | 20-30 | VB | denotes | stimulated |
T278 | 31-36 | NN | denotes | TNF-α |
T279 | 37-47 | NN | denotes | expression |
T280 | 48-51 | CC | denotes | and |
T281 | 52-61 | NN | denotes | secretion |
T282 | 62-64 | IN | denotes | by |
T283 | 65-69 | CC | denotes | both |
T284 | 70-73 | NN | denotes | PBM |
T285 | 74-77 | CC | denotes | and |
T286 | 78-83 | NN | denotes | THP-1 |
T287 | 84-89 | NN | denotes | cells |
T288 | 91-94 | PDT | denotes | All |
T289 | 95-100 | DT | denotes | these |
T290 | 101-108 | NN | denotes | effects |
T291 | 109-113 | VB | denotes | were |
T292 | 114-120 | VB | denotes | linked |
T293 | 121-123 | TO | denotes | to |
T294 | 124-129 | NN | denotes | NF-κB |
T295 | 130-140 | NN | denotes | activation |
T296 | 142-147 | DT | denotes | These |
R213 | T276 | T277 | arg1Of | dCGN,stimulated |
R214 | T277 | T274 | arg1Of | stimulated,Finally |
R215 | T277 | T275 | arg1Of | stimulated,"," |
R216 | T277 | T282 | arg1Of | stimulated,by |
R217 | T279 | T280 | arg1Of | expression,and |
R218 | T280 | T277 | arg2Of | and,stimulated |
R219 | T280 | T278 | arg1Of | and,TNF-α |
R220 | T281 | T280 | arg2Of | secretion,and |
R221 | T284 | T285 | arg1Of | PBM,and |
R222 | T285 | T282 | arg2Of | and,by |
R223 | T285 | T283 | arg1Of | and,both |
R224 | T287 | T285 | arg2Of | cells,and |
R225 | T287 | T286 | arg1Of | cells,THP-1 |
R226 | T290 | T288 | arg1Of | effects,All |
R227 | T290 | T289 | arg1Of | effects,these |
R228 | T290 | T291 | arg1Of | effects,were |
R229 | T290 | T292 | arg2Of | effects,linked |
R230 | T292 | T291 | arg2Of | linked,were |
R231 | T292 | T293 | arg1Of | linked,to |
R232 | T295 | T293 | arg2Of | activation,to |
R233 | T295 | T294 | arg1Of | activation,NF-κB |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T523 | 4-5 | . | denotes | . |
T524 | 6-13 | RB | denotes | Finally |
T525 | 13-14 | , | denotes | , |
T526 | 15-19 | NNP | denotes | dCGN |
T527 | 20-30 | VBD | denotes | stimulated |
T528 | 31-36 | JJ | denotes | TNF-α |
T529 | 37-47 | NN | denotes | expression |
T530 | 48-51 | CC | denotes | and |
T531 | 52-61 | NN | denotes | secretion |
T532 | 62-64 | IN | denotes | by |
T533 | 65-69 | DT | denotes | both |
T534 | 70-73 | NNP | denotes | PBM |
T535 | 74-77 | CC | denotes | and |
T536 | 78-83 | NNP | denotes | THP-1 |
T537 | 84-89 | NNS | denotes | cells |
T538 | 89-90 | . | denotes | . |
T539 | 91-94 | PDT | denotes | All |
T540 | 95-100 | DT | denotes | these |
T541 | 101-108 | NNS | denotes | effects |
T542 | 109-113 | VBD | denotes | were |
T543 | 114-120 | VBN | denotes | linked |
T544 | 121-123 | TO | denotes | to |
T545 | 124-129 | NNP | denotes | NF-κB |
T546 | 130-140 | NN | denotes | activation |
T547 | 140-141 | . | denotes | . |
T548 | 142-147 | DT | denotes | These |
R453 | T524 | T527 | advmod | Finally,stimulated |
R454 | T525 | T527 | punct | ",",stimulated |
R455 | T526 | T527 | nsubj | dCGN,stimulated |
R456 | T527 | T527 | ROOT | stimulated,stimulated |
R457 | T528 | T529 | amod | TNF-α,expression |
R458 | T529 | T527 | dobj | expression,stimulated |
R459 | T530 | T529 | cc | and,expression |
R460 | T531 | T529 | conj | secretion,expression |
R461 | T532 | T527 | prep | by,stimulated |
R462 | T533 | T534 | preconj | both,PBM |
R463 | T534 | T537 | nmod | PBM,cells |
R464 | T535 | T534 | cc | and,PBM |
R465 | T536 | T534 | conj | THP-1,PBM |
R466 | T537 | T532 | pobj | cells,by |
R467 | T538 | T527 | punct | .,stimulated |
R468 | T539 | T541 | predet | All,effects |
R469 | T540 | T541 | det | these,effects |
R470 | T541 | T543 | nsubjpass | effects,linked |
R471 | T542 | T543 | auxpass | were,linked |
R472 | T543 | T543 | ROOT | linked,linked |
R473 | T544 | T543 | prep | to,linked |
R474 | T545 | T546 | compound | NF-κB,activation |
R475 | T546 | T544 | pobj | activation,to |
R476 | T547 | T543 | punct | .,linked |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T81 | 6-90 | Sentence | denotes | Finally, dCGN stimulated TNF-α expression and secretion by both PBM and THP-1 cells. |
T82 | 91-141 | Sentence | denotes | All these effects were linked to NF-κB activation. |
T12 | 6-90 | Sentence | denotes | Finally, dCGN stimulated TNF-α expression and secretion by both PBM and THP-1 cells. |
T13 | 91-141 | Sentence | denotes | All these effects were linked to NF-κB activation. |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T657 | 20-30 | Positive_regulation | denotes | stimulated |
T658 | 20-30 | Positive_regulation | denotes | stimulated |
T659 | 31-36 | Protein | denotes | TNF-α |
T660 | 37-47 | Gene_expression | denotes | expression |
T661 | 52-61 | Localization | denotes | secretion |
R532 | T659 | T660 | themeOf | TNF-α,expression |
R533 | T659 | T661 | themeOf | TNF-α,secretion |
R534 | T660 | T658 | themeOf | expression,stimulated |
R535 | T661 | T657 | themeOf | secretion,stimulated |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T675 | 15-19 | Protein | denotes | dCGN |
T676 | 31-36 | Protein | denotes | TNF-α |
T677 | 37-47 | Gene_expression | denotes | expression |
T678 | 20-30 | Positive_regulation | denotes | stimulated |
T679 | 124-129 | Protein | denotes | NF-κB |
T680 | 130-140 | Positive_regulation | denotes | activation |
R544 | T675 | T678 | causeOf | dCGN,stimulated |
R545 | T676 | T677 | themeOf | TNF-α,expression |
R546 | T677 | T678 | themeOf | expression,stimulated |
R547 | T679 | T680 | themeOf | NF-κB,activation |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T66 | 20-30 | Positive_regulation | denotes | stimulated |
T67 | 20-30 | Positive_regulation | denotes | stimulated |
T68 | 31-36 | Protein | denotes | TNF-α |
T69 | 37-47 | Gene_expression | denotes | expression |
T70 | 52-61 | Localization | denotes | secretion |
R24 | T68 | T69 | themeOf | TNF-α,expression |
R25 | T68 | T70 | themeOf | TNF-α,secretion |
R26 | T69 | T67 | themeOf | expression,stimulated |
R27 | T70 | T66 | themeOf | secretion,stimulated |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T324 | 31-34 | P01375 | denotes | TNF |
T325 | 31-36 | P01375 | denotes | TNF-α |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T46 | 20-30 | Positive_regulation | denotes | stimulated |
T47 | 31-36 | Protein | denotes | TNF-α |
T48 | 37-47 | Gene_expression | denotes | expression |
T49 | 52-61 | Localization | denotes | secretion |
R19 | T47 | T48 | themeOf | TNF-α,expression |
R20 | T48 | T46 | themeOf | expression,stimulated |
R21 | T49 | T46 | themeOf | secretion,stimulated |