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PMC:2800179 / 11619-11870 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T4805 0-8 JJ denotes Standard
T4806 9-12 NN denotes PCR
T4807 13-22 NN denotes reactions
T4808 23-27 VB denotes were
T4809 28-37 VB denotes performed
T4810 38-42 IN denotes with
T4811 43-44 CD denotes 1
T4812 45-47 NN denotes µl
T4813 48-50 IN denotes of
T4814 51-54 DT denotes the
T4815 55-59 NN denotes cDNA
T4816 60-68 NN denotes solution
T4817 68-69 -COMMA- denotes ,
T4818 70-72 CD denotes 50
T4819 73-75 NN denotes µM
T4820 76-78 IN denotes of
T4821 79-83 DT denotes each
T4822 84-90 NN denotes primer
T4823 91-99 NN denotes solution
T4824 99-100 -COMMA- denotes ,
T4825 101-103 CD denotes 10
T4826 104-106 NN denotes mM
T4827 107-109 IN denotes of
T4828 110-114 DT denotes each
T4829 115-119 NN denotes dNTP
T4830 119-120 -COMMA- denotes ,
T4831 121-123 CD denotes 25
T4832 124-126 NN denotes mM
T4833 127-132 NN denotes MgCl2
T4834 132-133 -COMMA- denotes ,
T4835 134-137 NNP denotes 10X
T4836 138-146 NNP denotes Goldstar
T4837 147-150 NN denotes DNA
T4838 151-161 NN denotes polymerase
T4839 162-170 NN denotes reaction
T4840 171-177 NN denotes buffer
T4841 177-178 -COMMA- denotes ,
T4842 179-182 CC denotes and
T4843 183-186 CD denotes 0.5
T4844 187-192 NN denotes units
T4845 193-195 IN denotes of
T4846 196-204 NNP denotes Goldstar
T4847 205-208 NN denotes DNA
T4848 209-219 NN denotes polymerase
T4849 220-221 -LRB- denotes (
T4850 221-231 NNP denotes Eurogentec
T4851 231-232 -COMMA- denotes ,
T4852 233-240 NNP denotes Seraing
T4853 240-241 -COMMA- denotes ,
T4854 242-249 NNP denotes Belgium
T4855 249-250 -RRB- denotes )
R4268 T4807 T4805 arg1Of reactions,Standard
R4269 T4807 T4806 arg1Of reactions,PCR
R4270 T4807 T4808 arg1Of reactions,were
R4271 T4807 T4809 arg2Of reactions,performed
R4272 T4809 T4808 arg2Of performed,were
R4273 T4809 T4810 arg1Of performed,with
R4274 T4809 T4849 arg1Of performed,(
R4275 T4812 T4811 arg1Of µl,1
R4276 T4812 T4813 arg1Of µl,of
R4277 T4812 T4817 arg1Of µl,","
R4278 T4816 T4813 arg2Of solution,of
R4279 T4816 T4814 arg1Of solution,the
R4280 T4816 T4815 arg1Of solution,cDNA
R4281 T4817 T4824 arg1Of ",",","
R4282 T4819 T4817 arg2Of µM,","
R4283 T4819 T4818 arg1Of µM,50
R4284 T4819 T4820 arg1Of µM,of
R4285 T4823 T4820 arg2Of solution,of
R4286 T4823 T4821 arg1Of solution,each
R4287 T4823 T4822 arg1Of solution,primer
R4288 T4824 T4830 arg1Of ",",","
R4289 T4826 T4824 arg2Of mM,","
R4290 T4826 T4825 arg1Of mM,10
R4291 T4826 T4827 arg1Of mM,of
R4292 T4829 T4827 arg2Of dNTP,of
R4293 T4829 T4828 arg1Of dNTP,each
R4294 T4830 T4834 arg1Of ",",","
R4295 T4830 T4842 arg1Of ",",and
R4296 T4831 T4832 arg1Of 25,mM
R4297 T4833 T4830 arg2Of MgCl2,","
R4298 T4833 T4831 arg1Of MgCl2,25
R4299 T4836 T4835 arg1Of Goldstar,10X
R4300 T4840 T4834 arg2Of buffer,","
R4301 T4840 T4836 arg1Of buffer,Goldstar
R4302 T4840 T4837 arg1Of buffer,DNA
R4303 T4840 T4838 arg1Of buffer,polymerase
R4304 T4840 T4839 arg1Of buffer,reaction
R4305 T4842 T4810 arg2Of and,with
R4306 T4842 T4841 arg1Of and,","
R4307 T4844 T4842 arg2Of units,and
R4308 T4844 T4843 arg1Of units,0.5
R4309 T4844 T4845 arg1Of units,of
R4310 T4848 T4845 arg2Of polymerase,of
R4311 T4848 T4846 arg1Of polymerase,Goldstar
R4312 T4848 T4847 arg1Of polymerase,DNA
R4313 T4850 T4851 arg1Of Eurogentec,","
R4314 T4851 T4849 arg2Of ",",(
R4315 T4851 T4853 arg1Of ",",","
R4316 T4852 T4851 arg2Of Seraing,","
R4317 T4854 T4853 arg2Of Belgium,","
R4318 T4855 T4849 arg3Of ),(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T5010 0-8 NNP denotes Standard
T5011 9-12 NNP denotes PCR
T5012 13-22 NNS denotes reactions
T5013 23-27 VBD denotes were
T5014 28-37 VBN denotes performed
T5015 38-42 IN denotes with
T5016 43-44 CD denotes 1
T5017 45-47 NN denotes µl
T5018 48-50 IN denotes of
T5019 51-54 DT denotes the
T5020 55-59 NNP denotes cDNA
T5021 60-68 NN denotes solution
T5022 68-69 , denotes ,
T5023 70-72 CD denotes 50
T5024 73-75 NN denotes µM
T5025 76-78 IN denotes of
T5026 79-83 DT denotes each
T5027 84-90 NN denotes primer
T5028 91-99 NN denotes solution
T5029 99-100 , denotes ,
T5030 101-103 CD denotes 10
T5031 104-106 NN denotes mM
T5032 107-109 IN denotes of
T5033 110-114 DT denotes each
T5034 115-119 NNP denotes dNTP
T5035 119-120 , denotes ,
T5036 121-123 CD denotes 25
T5037 124-126 NNP denotes mM
T5038 127-132 NNP denotes MgCl2
T5039 132-133 , denotes ,
T5040 134-137 NNP denotes 10X
T5041 138-146 NNP denotes Goldstar
T5042 147-150 NNP denotes DNA
T5043 151-161 NN denotes polymerase
T5044 162-170 NN denotes reaction
T5045 171-177 NN denotes buffer
T5046 177-178 , denotes ,
T5047 179-182 CC denotes and
T5048 183-186 CD denotes 0.5
T5049 187-192 NNS denotes units
T5050 193-195 IN denotes of
T5051 196-204 NNP denotes Goldstar
T5052 205-208 NNP denotes DNA
T5053 209-219 NN denotes polymerase
T5054 220-221 -LRB- denotes (
T5055 221-231 NNP denotes Eurogentec
T5056 231-232 , denotes ,
T5057 233-240 NNP denotes Seraing
T5058 240-241 , denotes ,
T5059 242-249 NNP denotes Belgium
T5060 249-250 -RRB- denotes )
T5061 250-251 . denotes .
R4473 T5010 T5012 amod Standard,reactions
R4474 T5011 T5012 compound PCR,reactions
R4475 T5012 T5014 nsubjpass reactions,performed
R4476 T5013 T5014 auxpass were,performed
R4477 T5014 T5014 ROOT performed,performed
R4478 T5015 T5014 prep with,performed
R4479 T5016 T5017 nummod 1,µl
R4480 T5017 T5015 pobj µl,with
R4481 T5018 T5017 prep of,µl
R4482 T5019 T5021 det the,solution
R4483 T5020 T5021 compound cDNA,solution
R4484 T5021 T5018 pobj solution,of
R4485 T5022 T5021 punct ",",solution
R4486 T5023 T5024 nummod 50,µM
R4487 T5024 T5021 appos µM,solution
R4488 T5025 T5024 prep of,µM
R4489 T5026 T5028 det each,solution
R4490 T5027 T5028 compound primer,solution
R4491 T5028 T5025 pobj solution,of
R4492 T5029 T5024 punct ",",µM
R4493 T5030 T5031 nummod 10,mM
R4494 T5031 T5024 appos mM,µM
R4495 T5032 T5031 prep of,mM
R4496 T5033 T5034 det each,dNTP
R4497 T5034 T5032 pobj dNTP,of
R4498 T5035 T5024 punct ",",µM
R4499 T5036 T5038 nummod 25,MgCl2
R4500 T5037 T5038 compound mM,MgCl2
R4501 T5038 T5024 appos MgCl2,µM
R4502 T5039 T5038 punct ",",MgCl2
R4503 T5040 T5042 compound 10X,DNA
R4504 T5041 T5042 compound Goldstar,DNA
R4505 T5042 T5045 compound DNA,buffer
R4506 T5043 T5045 compound polymerase,buffer
R4507 T5044 T5045 compound reaction,buffer
R4508 T5045 T5038 appos buffer,MgCl2
R4509 T5046 T5038 punct ",",MgCl2
R4510 T5047 T5038 cc and,MgCl2
R4511 T5048 T5049 nummod 0.5,units
R4512 T5049 T5024 appos units,µM
R4513 T5050 T5049 prep of,units
R4514 T5051 T5053 compound Goldstar,polymerase
R4515 T5052 T5053 compound DNA,polymerase
R4516 T5053 T5050 pobj polymerase,of
R4517 T5054 T5055 punct (,Eurogentec
R4518 T5055 T5053 appos Eurogentec,polymerase
R4519 T5056 T5055 punct ",",Eurogentec
R4520 T5057 T5055 conj Seraing,Eurogentec
R4521 T5058 T5057 punct ",",Seraing
R4522 T5059 T5057 conj Belgium,Seraing
R4523 T5060 T5024 punct ),µM
R4524 T5061 T5014 punct .,performed

sentences

Id Subject Object Predicate Lexical cue
T4748 0-251 Sentence denotes Standard PCR reactions were performed with 1 µl of the cDNA solution, 50 µM of each primer solution, 10 mM of each dNTP, 25 mM MgCl2, 10X Goldstar DNA polymerase reaction buffer, and 0.5 units of Goldstar DNA polymerase (Eurogentec, Seraing, Belgium).
T103 0-251 Sentence denotes Standard PCR reactions were performed with 1 µl of the cDNA solution, 50 µM of each primer solution, 10 mM of each dNTP, 25 mM MgCl2, 10X Goldstar DNA polymerase reaction buffer, and 0.5 units of Goldstar DNA polymerase (Eurogentec, Seraing, Belgium).

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T5214 138-161 Protein denotes Goldstar DNA polymerase
T5215 196-219 Protein denotes Goldstar DNA polymerase