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PMC:2791889 / 4027-4201 JSONTXT

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bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1167 39-43 P05231 denotes IL-6
T1168 45-50 P01137 denotes TGF-β
T1169 60-65 P40763 denotes STAT3
T1170 115-120 P51449 denotes RORγt

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T1072 39-43 Protein denotes IL-6
T1073 45-50 Protein denotes TGF-β
T1074 60-65 Protein denotes STAT3
T1075 66-75 Positive_regulation denotes dependent
T1076 76-86 Gene_expression denotes expression
T1077 115-120 Protein denotes RORγt
R782 T1074 T1075 causeOf STAT3,dependent
R783 T1076 T1075 themeOf expression,dependent
R784 T1077 T1076 themeOf RORγt,expression

2_test

Id Subject Object Predicate Lexical cue
19646904-18053739-46582681 168-172 18053739 denotes 2007
19646904-17433650-46582681 168-172 17433650 denotes 2007
T38820 168-172 18053739 denotes 2007
T90712 168-172 17433650 denotes 2007

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1782 0-3 DT denotes The
T1783 4-15 NN denotes development
T1784 16-18 IN denotes of
T1785 19-23 NNP denotes Th17
T1786 24-29 NNS denotes cells
T1787 30-38 VBZ denotes requires
T1788 39-43 NNP denotes IL-6
T1789 43-44 , denotes ,
T1790 45-50 NNP denotes TGF-β
T1791 50-51 , denotes ,
T1792 52-55 CC denotes and
T1793 56-59 DT denotes the
T1794 60-75 JJ denotes STAT3-dependent
T1795 76-86 NN denotes expression
T1796 87-89 IN denotes of
T1797 90-93 DT denotes the
T1798 94-107 NN denotes transcription
T1799 108-114 NN denotes factor
T1800 115-120 NNP denotes RORγt
T1801 121-122 -LRB- denotes (
T1802 122-128 NNP denotes Ivanov
T1803 129-131 FW denotes et
T1804 132-135 FW denotes al.
T1805 135-136 , denotes ,
T1806 137-141 CD denotes 2007
T1807 141-142 : denotes ;
T1808 143-153 NNP denotes Stockinger
T1809 154-157 CC denotes and
T1810 158-166 NNP denotes Veldhoen
T1811 166-167 , denotes ,
T1812 168-172 CD denotes 2007
T1813 172-173 -RRB- denotes )
T1814 173-174 . denotes .
R1402 T1782 T1783 det The,development
R1403 T1783 T1787 nsubj development,requires
R1404 T1784 T1783 prep of,development
R1405 T1785 T1786 compound Th17,cells
R1406 T1786 T1784 pobj cells,of
R1407 T1787 T1787 ROOT requires,requires
R1408 T1788 T1787 dobj IL-6,requires
R1409 T1789 T1788 punct ",",IL-6
R1410 T1790 T1788 conj TGF-β,IL-6
R1411 T1791 T1790 punct ",",TGF-β
R1412 T1792 T1790 cc and,TGF-β
R1413 T1793 T1795 det the,expression
R1414 T1794 T1795 amod STAT3-dependent,expression
R1415 T1795 T1790 conj expression,TGF-β
R1416 T1796 T1795 prep of,expression
R1417 T1797 T1799 det the,factor
R1419 T1798 T1799 compound transcription,factor
R1421 T1799 T1796 pobj factor,of
R1424 T1800 T1804 nmod RORγt,al.
R1427 T1801 T1804 punct (,al.
R1434 T1802 T1804 compound Ivanov,al.
R1439 T1803 T1804 nmod et,al.
R1441 T1804 T1795 appos al.,expression
R1442 T1805 T1804 punct ",",al.
R1445 T1806 T1804 npadvmod 2007,al.
R1449 T1807 T1804 punct ;,al.
R1452 T1808 T1804 conj Stockinger,al.
R1456 T1809 T1808 cc and,Stockinger
R1459 T1810 T1808 conj Veldhoen,Stockinger
R1462 T1811 T1810 punct ",",Veldhoen
R1463 T1812 T1810 npadvmod 2007,Veldhoen
R1464 T1813 T1810 punct ),Veldhoen
R1466 T1814 T1787 punct .,requires

GO-BP

Id Subject Object Predicate Lexical cue
T2172 94-107 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T2166 4-15 http://purl.obolibrary.org/obo/GO_0032502 denotes development

GO-MF

Id Subject Object Predicate Lexical cue
T2216 39-43 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6

sentences

Id Subject Object Predicate Lexical cue
T1126 0-174 Sentence denotes The development of Th17 cells requires IL-6, TGF-β, and the STAT3-dependent expression of the transcription factor RORγt (Ivanov et al., 2007; Stockinger and Veldhoen, 2007).
T22 0-174 Sentence denotes The development of Th17 cells requires IL-6, TGF-β, and the STAT3-dependent expression of the transcription factor RORγt (Ivanov et al., 2007; Stockinger and Veldhoen, 2007).

events-check-again

Id Subject Object Predicate Lexical cue
T2509 39-43 Protein denotes IL-6
T2510 45-50 Protein denotes TGF-β
T2511 60-65 Protein denotes STAT3
T2512 66-75 Positive_regulation denotes dependent
T2513 76-86 Gene_expression denotes expression
T2514 115-120 Protein denotes RORγt
R1922 T2511 T2512 causeOf STAT3,dependent
R1923 T2513 T2512 themeOf expression,dependent
R1924 T2514 T2513 themeOf RORγt,expression

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T2597 39-43 Protein denotes IL-6
T2598 45-50 Protein denotes TGF-β
T2599 60-65 Protein denotes STAT3
T2600 76-86 Gene_expression denotes expression
T2601 66-75 Positive_regulation denotes dependent
R1964 T2597 T2600 themeOf IL-6,expression
R1965 T2599 T2601 causeOf STAT3,dependent
R1967 T2600 T2601 themeOf expression,dependent

test2

Id Subject Object Predicate Lexical cue
T970 30-38 Positive_regulation denotes requires
T971 39-43 Protein denotes IL-6
T972 45-50 Protein denotes TGF-β
T973 60-65 Protein denotes STAT3
T974 66-75 Positive_regulation denotes dependent
T975 76-86 Gene_expression denotes expression
T976 115-120 Protein denotes RORγt
R713 T971 T974 causeOf IL-6,dependent
R714 T971 T970 causeOf IL-6,requires
R715 T972 T974 causeOf TGF-β,dependent
R716 T972 T970 causeOf TGF-β,requires
R717 T973 T974 causeOf STAT3,dependent
R718 T975 T974 themeOf expression,dependent
R719 T976 T975 themeOf RORγt,expression