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PMC:2791889 / 35239-35566 JSONTXT

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bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T20924 30-33 P01730 denotes CD4

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T20865 30-33 Protein denotes CD4
T20866 257-260 Protein denotes ERK
T20867 265-270 Protein denotes actin

2_test

Id Subject Object Predicate Lexical cue
19646904-15485931-46582733 321-325 15485931 denotes 2004
T47248 321-325 15485931 denotes 2004

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T20871 0-14 NN denotes Immunoblotting
T20872 15-29 VB denotes Differentiated
T20873 30-34 JJ denotes CD4+
T20874 35-42 NN denotes T cells
T20875 43-47 VB denotes were
T20876 48-54 VB denotes rested
T20877 55-58 IN denotes for
T20878 59-60 CD denotes 5
T20879 61-63 NN denotes hr
T20880 64-66 IN denotes in
T20881 67-68 CD denotes 1
T20882 68-69 NN denotes %
T20883 70-84 JJ denotes FCS-containing
T20884 85-91 NN denotes medium
T20885 92-95 CC denotes and
T20886 96-108 VB denotes restimulated
T20887 109-111 IN denotes as
T20888 112-121 VB denotes described
T20889 122-125 IN denotes for
T20890 126-134 JJ denotes specific
T20891 135-146 NN denotes experiments
T20892 148-152 NN denotes Cell
T20893 153-160 NN denotes lysates
T20894 161-165 VB denotes were
T20895 166-174 VB denotes prepared
T20896 174-175 -COMMA- denotes ,
T20897 176-181 JJ denotes equal
T20898 182-189 NN denotes amounts
T20899 190-192 IN denotes of
T20900 193-200 NN denotes protein
T20901 201-205 VB denotes were
T20902 206-215 VB denotes separated
T20903 216-218 IN denotes by
T20904 219-227 NN denotes SDS-PAGE
T20905 227-228 -COMMA- denotes ,
T20906 229-232 CC denotes and
T20907 233-247 VB denotes phosphorylated
T20908 248-250 CC denotes or
T20909 251-256 JJ denotes total
T20910 257-260 NN denotes ERK
T20911 261-264 CC denotes and
T20912 265-270 NN denotes actin
T20913 271-275 VB denotes were
T20914 276-284 VB denotes detected
T20915 285-287 IN denotes as
T20916 288-297 VB denotes described
T20917 298-304 IN denotes before
T20918 305-306 -LRB- denotes (
T20919 306-312 NNP denotes Beinke
T20920 313-319 NNP denotes et al.
T20921 319-320 -COMMA- denotes ,
T20922 321-325 CD denotes 2004
T20923 325-326 -RRB- denotes )
R16542 T20874 T20872 arg2Of T cells,Differentiated
R16543 T20874 T20873 arg1Of T cells,CD4+
R16544 T20874 T20875 arg1Of T cells,were
R16545 T20874 T20876 arg2Of T cells,rested
R16546 T20874 T20886 arg1Of T cells,restimulated
R16547 T20876 T20875 arg2Of rested,were
R16548 T20876 T20877 arg1Of rested,for
R16549 T20876 T20885 arg1Of rested,and
R16550 T20879 T20877 arg2Of hr,for
R16551 T20879 T20878 arg1Of hr,5
R16552 T20879 T20880 arg1Of hr,in
R16553 T20881 T20882 arg1Of 1,%
R16554 T20884 T20880 arg2Of medium,in
R16555 T20884 T20881 arg1Of medium,1
R16556 T20884 T20883 arg1Of medium,FCS-containing
R16557 T20886 T20885 arg2Of restimulated,and
R16558 T20886 T20887 arg1Of restimulated,as
R16559 T20888 T20887 arg2Of described,as
R16560 T20888 T20889 arg1Of described,for
R16561 T20891 T20889 arg2Of experiments,for
R16562 T20891 T20890 arg1Of experiments,specific
R16563 T20893 T20892 arg1Of lysates,Cell
R16564 T20893 T20894 arg1Of lysates,were
R16565 T20893 T20895 arg2Of lysates,prepared
R16566 T20895 T20894 arg2Of prepared,were
R16567 T20898 T20897 arg1Of amounts,equal
R16568 T20898 T20899 arg1Of amounts,of
R16569 T20898 T20901 arg1Of amounts,were
R16570 T20898 T20902 arg2Of amounts,separated
R16571 T20900 T20899 arg2Of protein,of
R16572 T20902 T20901 arg2Of separated,were
R16573 T20902 T20906 arg1Of separated,and
R16574 T20904 T20902 arg1Of SDS-PAGE,separated
R16575 T20904 T20903 arg2Of SDS-PAGE,by
R16576 T20906 T20894 modOf and,were
R16577 T20906 T20896 arg1Of and,","
R16578 T20906 T20905 arg1Of and,","
R16579 T20907 T20908 arg1Of phosphorylated,or
R16580 T20909 T20908 arg2Of total,or
R16581 T20910 T20911 arg1Of ERK,and
R16582 T20911 T20907 arg1Of and,phosphorylated
R16583 T20911 T20909 arg1Of and,total
R16584 T20911 T20913 arg1Of and,were
R16585 T20911 T20914 arg2Of and,detected
R16586 T20912 T20911 arg2Of actin,and
R16587 T20914 T20906 arg2Of detected,and
R16588 T20914 T20913 arg2Of detected,were
R16589 T20914 T20915 arg1Of detected,as
R16590 T20916 T20915 arg2Of described,as
R16591 T20916 T20917 arg1Of described,before
R16592 T20920 T20917 arg2Of et al.,before
R16593 T20920 T20918 arg2Of et al.,(
R16594 T20920 T20919 arg1Of et al.,Beinke
R16595 T20920 T20921 arg1Of et al.,","
R16596 T20922 T20921 arg2Of 2004,","
R16597 T20923 T20918 arg3Of ),(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T20925 0-14 NNP denotes Immunoblotting
T20926 15-29 NNP denotes Differentiated
T20927 30-33 NNP denotes CD4
T20928 33-34 VBD denotes +
T20929 35-36 NNP denotes T
T20930 37-42 NNS denotes cells
T20931 43-47 VBD denotes were
T20932 48-54 VBN denotes rested
T20933 55-58 IN denotes for
T20934 59-60 CD denotes 5
T20935 61-63 NN denotes hr
T20936 64-66 IN denotes in
T20937 67-68 CD denotes 1
T20938 68-69 NN denotes %
T20939 70-84 JJ denotes FCS-containing
T20940 85-91 NN denotes medium
T20941 92-95 CC denotes and
T20942 96-108 VBD denotes restimulated
T20943 109-111 IN denotes as
T20944 112-121 VBN denotes described
T20945 122-125 IN denotes for
T20976 306-312 NNP denotes Beinke
T20977 313-315 FW denotes et
T20978 316-319 FW denotes al.
T20979 319-320 , denotes ,
T20980 321-325 CD denotes 2004
T20981 325-326 -RRB- denotes )
T20982 326-327 . denotes .
T20946 126-134 JJ denotes specific
T20947 135-146 NNS denotes experiments
T20948 146-147 . denotes .
T20949 148-152 NN denotes Cell
T20950 153-160 NNS denotes lysates
T20951 161-165 VBD denotes were
T20952 166-174 VBN denotes prepared
T20953 174-175 , denotes ,
T20954 176-181 JJ denotes equal
T20955 182-189 NNS denotes amounts
T20956 190-192 IN denotes of
T20957 193-200 NN denotes protein
T20958 201-205 VBD denotes were
T20959 206-215 VBN denotes separated
T20960 216-218 IN denotes by
T20961 219-227 NNP denotes SDS-PAGE
T20962 227-228 , denotes ,
T20963 229-232 CC denotes and
T20964 233-247 VBD denotes phosphorylated
T20965 248-250 CC denotes or
T20966 251-256 JJ denotes total
T20967 257-260 NNP denotes ERK
T20968 261-264 CC denotes and
T20969 265-270 NN denotes actin
T20970 271-275 VBD denotes were
T20971 276-284 VBN denotes detected
T20972 285-287 IN denotes as
T20973 288-297 VBN denotes described
T20974 298-304 IN denotes before
T20975 305-306 -LRB- denotes (
R16628 T20955 T20959 nsubjpass amounts,separated
R16629 T20956 T20955 prep of,amounts
R16630 T20957 T20956 pobj protein,of
R16631 T20958 T20959 auxpass were,separated
R16632 T20959 T20952 ccomp separated,prepared
R16633 T20960 T20959 agent by,separated
R16634 T20961 T20960 pobj SDS-PAGE,by
R16635 T20962 T20959 punct ",",separated
R16636 T20963 T20959 cc and,separated
R16637 T20964 T20959 conj phosphorylated,separated
R16638 T20965 T20964 cc or,phosphorylated
R16639 T20966 T20964 conj total,phosphorylated
R16640 T20967 T20971 nsubjpass ERK,detected
R16641 T20968 T20967 cc and,ERK
R16642 T20969 T20967 conj actin,ERK
R16643 T20970 T20971 auxpass were,detected
R16644 T20971 T20951 conj detected,were
R16645 T20972 T20973 mark as,described
R16646 T20973 T20971 advcl described,detected
R16647 T20974 T20973 prep before,described
R16648 T20975 T20978 punct (,al.
R16649 T20976 T20978 nmod Beinke,al.
R16650 T20977 T20978 nmod et,al.
R16651 T20978 T20974 pobj al.,before
R16652 T20979 T20978 punct ",",al.
R16653 T20980 T20978 npadvmod 2004,al.
R16654 T20981 T20978 punct ),al.
R16655 T20982 T20971 punct .,detected
R16598 T20925 T20930 nmod Immunoblotting,cells
R16599 T20926 T20930 amod Differentiated,cells
R16600 T20927 T20930 compound CD4,cells
R16601 T20928 T20930 amod +,cells
R16602 T20929 T20930 compound T,cells
R16603 T20930 T20932 nsubjpass cells,rested
R16604 T20931 T20932 auxpass were,rested
R16605 T20932 T20932 ROOT rested,rested
R16606 T20933 T20932 prep for,rested
R16607 T20934 T20935 nummod 5,hr
R16608 T20935 T20933 pobj hr,for
R16609 T20936 T20932 prep in,rested
R16610 T20937 T20938 nummod 1,%
R16611 T20938 T20940 nmod %,medium
R16612 T20939 T20940 amod FCS-containing,medium
R16613 T20940 T20936 pobj medium,in
R16614 T20941 T20932 cc and,rested
R16615 T20942 T20932 conj restimulated,rested
R16616 T20943 T20944 mark as,described
R16617 T20944 T20942 advcl described,restimulated
R16618 T20945 T20944 prep for,described
R16619 T20946 T20947 amod specific,experiments
R16620 T20947 T20945 pobj experiments,for
R16621 T20948 T20932 punct .,rested
R16622 T20949 T20950 compound Cell,lysates
R16623 T20950 T20951 nsubj lysates,were
R16624 T20951 T20951 ROOT were,were
R16625 T20952 T20951 acomp prepared,were
R16626 T20953 T20952 punct ",",prepared
R16627 T20954 T20955 amod equal,amounts

GO-BP

Id Subject Object Predicate Lexical cue
T20986 257-260 http://purl.obolibrary.org/obo/GO_0004707 denotes ERK

GO-MF

Id Subject Object Predicate Lexical cue
T20987 257-260 http://purl.obolibrary.org/obo/GO_0004707 denotes ERK

GO-CC

Id Subject Object Predicate Lexical cue
T20988 37-42 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T20989 148-152 http://purl.obolibrary.org/obo/GO_0005623 denotes Cell

sentences

Id Subject Object Predicate Lexical cue
T20868 0-14 Sentence denotes Immunoblotting
T20869 15-147 Sentence denotes Differentiated CD4+ T cells were rested for 5 hr in 1% FCS-containing medium and restimulated as described for specific experiments.
T20870 148-327 Sentence denotes Cell lysates were prepared, equal amounts of protein were separated by SDS-PAGE, and phosphorylated or total ERK and actin were detected as described before (Beinke et al., 2004).
T190 0-14 Sentence denotes Immunoblotting
T191 15-147 Sentence denotes Differentiated CD4+ T cells were rested for 5 hr in 1% FCS-containing medium and restimulated as described for specific experiments.
T192 148-327 Sentence denotes Cell lysates were prepared, equal amounts of protein were separated by SDS-PAGE, and phosphorylated or total ERK and actin were detected as described before (Beinke et al., 2004).

events-check-again

Id Subject Object Predicate Lexical cue
T20996 30-33 Protein denotes CD4
T20997 257-260 Protein denotes ERK
T20998 265-270 Protein denotes actin

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T20999 30-34 Protein denotes CD4+
T21000 257-260 Protein denotes ERK
T21001 265-270 Protein denotes actin

test2

Id Subject Object Predicate Lexical cue
T20862 30-33 Protein denotes CD4
T20863 257-260 Protein denotes ERK
T20864 265-270 Protein denotes actin