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PMC:2791889 / 2158-2477 JSONTXT

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bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1138 86-89 P01730 denotes CD4
T1139 95-98 P10966 denotes CD8
T1140 95-98 P01732 denotes CD8
T1141 124-127 P01730 denotes CD4
T1142 155-167 P01579 denotes interferon-γ
T1143 169-174 P01579 denotes IFN-γ
T1144 180-185 P22301 denotes IL-10
T1145 265-270 P29460 denotes IL-12
T1146 265-270 P29459 denotes IL-12

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T1019 86-89 Protein denotes CD4
T1020 95-98 Protein denotes CD8
T1021 124-127 Protein denotes CD4
T1022 142-149 Gene_expression denotes produce
T1023 142-149 Gene_expression denotes produce
T1024 155-167 Protein denotes interferon-γ
T1025 169-174 Protein denotes IFN-γ
T1026 180-185 Protein denotes IL-10
T1027 265-270 Protein denotes IL-12
R742 T1024 T1023 themeOf interferon-γ,produce
R744 T1026 T1022 themeOf IL-10,produce
R743 T1025 T1024 equivalentTo IFN-γ,interferon-γ

2_test

Id Subject Object Predicate Lexical cue
19646904-17994022-46582671 64-68 17994022 denotes 2007
19646904-17994023-46582671 64-68 17994023 denotes 2007
19646904-17994024-46582671 64-68 17994024 denotes 2007
19646904-17994025-46582671 64-68 17994025 denotes 2007
T13686 64-68 17994022 denotes 2007
T94039 64-68 17994023 denotes 2007
T21079 64-68 17994024 denotes 2007
T4832 64-68 17994025 denotes 2007

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1404 9-11 FW denotes et
T1405 12-15 FW denotes al.
T1406 15-16 , denotes ,
T1407 17-21 CD denotes 2007
T1408 21-22 : denotes ;
T1409 23-31 NNP denotes McGeachy
T1410 32-34 FW denotes et
T1411 35-38 FW denotes al.
T1412 38-39 , denotes ,
T1413 40-44 CD denotes 2007
T1414 44-45 : denotes ;
T1415 46-55 NNP denotes Stumhofer
T1416 56-58 FW denotes et
T1417 59-62 FW denotes al.
T1418 62-63 , denotes ,
T1419 64-68 CD denotes 2007
T1420 68-69 -RRB- denotes )
T1421 69-70 . denotes .
T1422 71-73 IN denotes In
T1423 74-79 NN denotes vitro
T1424 80-85 JJ denotes human
T1425 86-89 NNP denotes CD4
T1426 89-90 NN denotes +
T1427 91-94 CC denotes and
T1428 95-98 CD denotes CD8
T1429 98-99 CD denotes +
T1430 100-101 NNP denotes T
T1431 102-106 NN denotes cell
T1432 107-113 NNS denotes clones
T1433 113-114 , denotes ,
T1434 115-117 CC denotes or
T1435 118-123 NN denotes mouse
T1436 124-127 NNP denotes CD4
T1437 127-128 NNP denotes +
T1438 129-130 NNP denotes T
T1439 131-136 NNS denotes cells
T1440 137-141 WDT denotes that
T1441 142-149 VBP denotes produce
T1442 150-154 DT denotes both
T1443 155-167 JJ denotes interferon-γ
T1444 168-169 -LRB- denotes (
T1445 169-174 JJ denotes IFN-γ
T1446 174-175 -RRB- denotes )
T1447 176-179 CC denotes and
T1448 180-185 NNP denotes IL-10
T1449 185-186 , denotes ,
T1450 187-190 MD denotes can
T1451 191-193 VB denotes be
T1452 194-208 VBN denotes differentiated
T1453 209-211 IN denotes by
T1454 212-213 NNP denotes T
T1455 214-218 NN denotes cell
T1456 219-227 NN denotes receptor
T1457 228-229 -LRB- denotes (
T1458 229-232 NNP denotes TCR
T1459 232-233 -RRB- denotes )
T1460 233-234 : denotes -
T1461 234-245 NN denotes stimulation
T1462 246-248 IN denotes in
T1463 249-252 DT denotes the
T1464 253-261 NN denotes presence
T1465 262-264 IN denotes of
T1466 265-270 NN denotes IL-12
T1467 271-272 -LRB- denotes (
T1468 272-277 NNP denotes Chang
T1469 278-280 FW denotes et
T1470 281-284 FW denotes al.
T1471 284-285 , denotes ,
T1472 286-290 CD denotes 2007
T1473 290-291 : denotes ;
T1474 292-298 NNP denotes Gerosa
T1475 299-301 FW denotes et
T1476 302-305 FW denotes al.
T1477 305-306 , denotes ,
T1478 307-311 CD denotes 1996
T1479 311-312 : denotes ;
R1024 T1404 T1405 nmod et,al.
R1025 T1405 T1417 ccomp al.,al.
R1026 T1406 T1405 punct ",",al.
R1027 T1407 T1405 npadvmod 2007,al.
R1028 T1408 T1417 punct ;,al.
R1029 T1409 T1411 compound McGeachy,al.
R1030 T1410 T1411 nmod et,al.
R1031 T1411 T1417 ccomp al.,al.
R1032 T1412 T1411 punct ",",al.
R1033 T1413 T1411 npadvmod 2007,al.
R1034 T1414 T1417 punct ;,al.
R1035 T1415 T1417 compound Stumhofer,al.
R1036 T1416 T1417 nmod et,al.
R1037 T1417 T1417 ROOT al.,al.
R1038 T1418 T1417 punct ",",al.
R1039 T1419 T1417 npadvmod 2007,al.
R1040 T1420 T1417 punct ),al.
R1041 T1421 T1417 punct .,al.
R1042 T1422 T1452 prep In,differentiated
R1043 T1423 T1422 pobj vitro,In
R1044 T1424 T1426 amod human,+
R1045 T1425 T1426 compound CD4,+
R1046 T1426 T1452 advcl +,differentiated
R1047 T1427 T1426 cc and,+
R1048 T1428 T1432 nummod CD8,clones
R1049 T1429 T1432 nummod +,clones
R1050 T1430 T1432 compound T,clones
R1051 T1431 T1432 compound cell,clones
R1052 T1432 T1426 conj clones,+
R1053 T1433 T1432 punct ",",clones
R1054 T1434 T1432 cc or,clones
R1055 T1435 T1439 compound mouse,cells
R1056 T1436 T1439 compound CD4,cells
R1057 T1437 T1439 compound +,cells
R1058 T1438 T1439 compound T,cells
R1059 T1439 T1432 conj cells,clones
R1060 T1440 T1441 nsubj that,produce
R1061 T1441 T1439 relcl produce,cells
R1062 T1442 T1443 preconj both,interferon-γ
R1063 T1443 T1441 dobj interferon-γ,produce
R1064 T1444 T1443 punct (,interferon-γ
R1065 T1445 T1443 appos IFN-γ,interferon-γ
R1066 T1446 T1443 punct ),interferon-γ
R1067 T1447 T1443 cc and,interferon-γ
R1068 T1448 T1443 conj IL-10,interferon-γ
R1069 T1449 T1452 punct ",",differentiated
R1070 T1450 T1452 aux can,differentiated
R1071 T1451 T1452 auxpass be,differentiated
R1072 T1452 T1452 ROOT differentiated,differentiated
R1073 T1453 T1452 agent by,differentiated
R1074 T1454 T1456 compound T,receptor
R1075 T1455 T1456 compound cell,receptor
R1076 T1456 T1453 pobj receptor,by
R1077 T1457 T1458 punct (,TCR
R1078 T1458 T1456 appos TCR,receptor
R1079 T1459 T1458 punct ),TCR
R1080 T1460 T1456 punct -,receptor
R1081 T1461 T1452 conj stimulation,differentiated
R1082 T1462 T1461 prep in,stimulation
R1083 T1463 T1464 det the,presence
R1084 T1464 T1462 pobj presence,in
R1085 T1465 T1464 prep of,presence
R1086 T1466 T1465 pobj IL-12,of
R1088 T1468 T1470 compound Chang,al.
R1089 T1469 T1470 nmod et,al.
R1091 T1471 T1470 punct ",",al.
R1092 T1472 T1470 npadvmod 2007,al.
R1094 T1474 T1476 compound Gerosa,al.
R1095 T1475 T1476 compound et,al.
R1097 T1477 T1476 punct ",",al.
R1098 T1478 T1476 npadvmod 1996,al.

GO-BP

Id Subject Object Predicate Lexical cue
T2136 229-232 http://purl.obolibrary.org/obo/GO_0006283 denotes TCR

GO-MF

Id Subject Object Predicate Lexical cue
T2194 180-185 http://purl.obolibrary.org/obo/GO_0005141 denotes IL-10
T2203 155-167 http://purl.obolibrary.org/obo/GO_0005133 denotes interferon-γ
T2204 265-270 http://purl.obolibrary.org/obo/GO_0005143 denotes IL-12

GO-CC

Id Subject Object Predicate Lexical cue
T2227 102-106 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T2228 214-218 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T2241 229-232 http://purl.obolibrary.org/obo/GO_0042101 denotes TCR

events-check-again

Id Subject Object Predicate Lexical cue
T2456 86-89 Protein denotes CD4
T2457 95-98 Protein denotes CD8
T2458 124-127 Protein denotes CD4
T2459 142-149 Gene_expression denotes produce
T2460 142-149 Gene_expression denotes produce
T2461 155-167 Protein denotes interferon-γ
T2462 169-174 Protein denotes IFN-γ
T2463 180-185 Protein denotes IL-10
T2464 265-270 Protein denotes IL-12
R1892 T2461 T2460 themeOf interferon-γ,produce
R1894 T2462 T2461 equivalentTo IFN-γ,interferon-γ
R1895 T2463 T2459 themeOf IL-10,produce

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T2557 86-89 Protein denotes CD4
T2558 95-99 Protein denotes CD8+
T2559 124-127 Protein denotes CD4
T2560 155-167 Protein denotes interferon-γ
T2561 169-174 Protein denotes IFN-γ
T2562 180-185 Protein denotes IL-10
T2563 212-227 Protein denotes T cell receptor
T2564 229-232 Protein denotes TCR
T2565 265-270 Protein denotes IL-12
T2566 142-149 Gene_expression denotes produce
T2567 142-149 Gene_expression denotes produce
T2568 142-149 Gene_expression denotes produce
R1934 T2560 T2566 themeOf interferon-γ,produce
R1935 T2561 T2567 themeOf IFN-γ,produce
R1937 T2562 T2568 themeOf IL-10,produce

test2

Id Subject Object Predicate Lexical cue
T933 86-89 Protein denotes CD4
T934 95-98 Protein denotes CD8
T935 124-127 Protein denotes CD4
T936 142-149 Gene_expression denotes produce
T937 155-167 Protein denotes interferon-γ
T938 169-174 Protein denotes IFN-γ
T939 180-185 Protein denotes IL-10
T940 265-270 Protein denotes IL-12
R690 T937 T936 themeOf interferon-γ,produce
R691 T938 T937 equivalentTo IFN-γ,interferon-γ
R692 T939 T936 themeOf IL-10,produce