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PMC:2791889 / 20420-20679 JSONTXT

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bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T12492 29-35 P23771 denotes GATA-3
T12493 241-246 P29460 denotes IL-12
T12494 241-246 P29459 denotes IL-12

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T11886 29-35 Protein denotes GATA-3
T11887 36-51 Transcription denotes mRNA expression
T11888 178-191 Negative_regulation denotes downregulated
T11889 241-246 Protein denotes IL-12
R9167 T11886 T11887 themeOf GATA-3,mRNA expression
R9168 T11887 T11888 themeOf mRNA expression,downregulated
R9169 T11889 T11888 causeOf IL-12,downregulated

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T12199 0-2 IN denotes In
T12200 3-11 NN denotes contrast
T12201 11-12 -COMMA- denotes ,
T12202 13-17 JJ denotes high
T12203 18-25 NN denotes amounts
T12204 26-28 IN denotes of
T12205 29-35 NN denotes GATA-3
T12206 36-40 NN denotes mRNA
T12207 41-51 NN denotes expression
T12208 52-56 VB denotes were
T12209 57-61 RB denotes only
T12210 62-70 VB denotes observed
T12211 71-76 IN denotes under
T12212 77-80 NN denotes Th2
T12213 81-85 NN denotes cell
T12214 86-101 NN denotes differentiation
T12215 102-112 NN denotes conditions
T12216 113-114 -LRB- denotes (
T12217 114-122 JJ denotes low-dose
T12218 123-130 NN denotes antigen
T12219 130-131 -RRB- denotes )
T12220 132-133 -LRB- denotes (
T12221 133-142 NN denotes Figure 6B
T12222 142-143 -RRB- denotes )
T12223 143-144 -COMMA- denotes ,
T12224 145-148 CC denotes and
T12225 149-153 DT denotes this
T12226 154-164 NN denotes expression
T12227 165-168 VB denotes was
T12228 169-177 RB denotes markedly
T12229 178-191 VB denotes downregulated
T12230 192-194 IN denotes by
T12231 195-199 CC denotes both
T12232 200-210 VB denotes increasing
T12233 211-218 NN denotes antigen
T12234 219-223 NN denotes dose
T12235 224-227 CC denotes and
T12236 228-237 NN denotes coculture
T12237 238-240 IN denotes in
T12238 241-246 NN denotes IL-12
T12239 247-248 -LRB- denotes (
T12240 248-257 NN denotes Figure 6B
T12241 257-258 -RRB- denotes )
R9458 T12200 T12199 arg2Of contrast,In
R9459 T12203 T12202 arg1Of amounts,high
R9460 T12203 T12204 arg1Of amounts,of
R9461 T12203 T12208 arg1Of amounts,were
R9462 T12203 T12210 arg2Of amounts,observed
R9463 T12207 T12204 arg2Of expression,of
R9464 T12207 T12205 arg1Of expression,GATA-3
R9465 T12207 T12206 arg1Of expression,mRNA
R9466 T12210 T12208 arg2Of observed,were
R9467 T12210 T12209 arg1Of observed,only
R9468 T12210 T12211 arg1Of observed,under
R9469 T12210 T12224 arg1Of observed,and
R9470 T12215 T12211 arg2Of conditions,under
R9471 T12215 T12212 arg1Of conditions,Th2
R9472 T12215 T12213 arg1Of conditions,cell
R9473 T12215 T12214 arg1Of conditions,differentiation
R9474 T12215 T12216 arg1Of conditions,(
R9475 T12215 T12220 arg1Of conditions,(
R9476 T12218 T12216 arg2Of antigen,(
R9477 T12218 T12217 arg1Of antigen,low-dose
R9478 T12219 T12216 arg3Of ),(
R9479 T12221 T12220 arg2Of Figure 6B,(
R9480 T12222 T12220 arg3Of ),(
R9481 T12224 T12199 arg1Of and,In
R9482 T12224 T12201 arg1Of and,","
R9483 T12224 T12223 arg1Of and,","
R9484 T12226 T12225 arg1Of expression,this
R9485 T12226 T12227 arg1Of expression,was
R9486 T12226 T12229 arg2Of expression,downregulated
R9487 T12229 T12224 arg2Of downregulated,and
R9488 T12229 T12227 arg2Of downregulated,was
R9489 T12229 T12228 arg1Of downregulated,markedly
R9490 T12234 T12232 arg1Of dose,increasing
R9491 T12234 T12233 arg1Of dose,antigen
R9492 T12234 T12235 arg1Of dose,and
R9493 T12235 T12229 arg1Of and,downregulated
R9494 T12235 T12230 arg2Of and,by
R9495 T12235 T12231 arg1Of and,both
R9496 T12235 T12237 arg1Of and,in
R9497 T12236 T12235 arg2Of coculture,and
R9498 T12238 T12237 arg2Of IL-12,in
R9499 T12238 T12239 arg1Of IL-12,(
R9500 T12240 T12239 arg2Of Figure 6B,(
R9501 T12241 T12239 arg3Of ),(

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T12460 149-164 Anaphor denotes this expression
T12461 36-51 Antecedent denotes mRNA expression
R9724 T12460 T12461 boundBy this expression,mRNA expression

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T12784 0-2 IN denotes In
T12785 3-11 NN denotes contrast
T12786 11-12 , denotes ,
T12787 13-17 JJ denotes high
T12788 18-25 NNS denotes amounts
T12789 26-28 IN denotes of
T12790 29-35 NNP denotes GATA-3
T12791 36-40 NNP denotes mRNA
T12792 41-51 NN denotes expression
T12793 52-56 VBD denotes were
T12794 57-61 RB denotes only
T12795 62-70 VBN denotes observed
T12796 71-76 IN denotes under
T12797 77-80 NNP denotes Th2
T12798 81-85 NN denotes cell
T12799 86-101 NN denotes differentiation
T12800 102-112 NNS denotes conditions
T12801 113-114 -LRB- denotes (
T12802 114-122 JJ denotes low-dose
T12803 123-130 NN denotes antigen
T12804 130-131 -RRB- denotes )
T12805 132-133 -LRB- denotes (
T12806 133-139 NN denotes Figure
T12807 140-142 NN denotes 6B
T12808 142-143 -RRB- denotes )
T12809 143-144 , denotes ,
T12810 145-148 CC denotes and
T12811 149-153 DT denotes this
T12812 154-164 NN denotes expression
T12813 165-168 VBD denotes was
T12814 169-177 RB denotes markedly
T12815 178-191 VBN denotes downregulated
T12816 192-194 IN denotes by
T12817 195-199 DT denotes both
T12818 200-210 VBG denotes increasing
T12819 211-218 NN denotes antigen
T12820 219-223 NN denotes dose
T12821 224-227 CC denotes and
T12822 228-237 NN denotes coculture
T12823 238-240 IN denotes in
T12824 241-246 NNP denotes IL-12
T12825 247-248 -LRB- denotes (
T12826 248-254 NNP denotes Figure
T12827 255-257 NNP denotes 6B
T12828 257-258 -RRB- denotes )
T12829 258-259 . denotes .
R9987 T12784 T12795 prep In,observed
R9988 T12785 T12784 pobj contrast,In
R9989 T12786 T12795 punct ",",observed
R9990 T12787 T12788 amod high,amounts
R9991 T12788 T12795 nsubjpass amounts,observed
R9992 T12789 T12788 prep of,amounts
R9993 T12790 T12792 compound GATA-3,expression
R9994 T12791 T12792 compound mRNA,expression
R9995 T12792 T12789 pobj expression,of
R9996 T12793 T12795 auxpass were,observed
R9997 T12794 T12795 advmod only,observed
R9998 T12795 T12795 ROOT observed,observed
R9999 T12796 T12795 prep under,observed
R10000 T12797 T12800 compound Th2,conditions
R10001 T12798 T12799 compound cell,differentiation
R10002 T12799 T12800 compound differentiation,conditions
R10003 T12800 T12796 pobj conditions,under
R10004 T12801 T12800 punct (,conditions
R10005 T12802 T12803 amod low-dose,antigen
R10006 T12803 T12800 appos antigen,conditions
R10007 T12804 T12800 punct ),conditions
R10008 T12805 T12807 punct (,6B
R10009 T12806 T12807 compound Figure,6B
R10010 T12807 T12800 appos 6B,conditions
R10011 T12808 T12795 punct ),observed
R10012 T12809 T12795 punct ",",observed
R10013 T12810 T12795 cc and,observed
R10014 T12811 T12812 det this,expression
R10015 T12812 T12815 nsubjpass expression,downregulated
R10016 T12813 T12815 auxpass was,downregulated
R10017 T12814 T12815 advmod markedly,downregulated
R10018 T12815 T12795 conj downregulated,observed
R10019 T12816 T12815 agent by,downregulated
R10020 T12817 T12820 det both,dose
R10021 T12818 T12820 amod increasing,dose
R10022 T12819 T12820 compound antigen,dose
R10023 T12820 T12816 pobj dose,by
R10024 T12821 T12820 cc and,dose
R10025 T12822 T12820 conj coculture,dose
R10026 T12823 T12820 prep in,dose
R10027 T12824 T12823 pobj IL-12,in
R10028 T12825 T12827 punct (,6B
R10029 T12826 T12827 compound Figure,6B
R10030 T12827 T12824 appos 6B,IL-12
R10031 T12828 T12824 punct ),IL-12
R10032 T12829 T12815 punct .,downregulated

GO-BP

Id Subject Object Predicate Lexical cue
T13090 81-101 http://purl.obolibrary.org/obo/GO_0030154 denotes cell differentiation

GO-MF

Id Subject Object Predicate Lexical cue
T13105 241-246 http://purl.obolibrary.org/obo/GO_0005143 denotes IL-12

sentences

Id Subject Object Predicate Lexical cue
T11951 0-259 Sentence denotes In contrast, high amounts of GATA-3 mRNA expression were only observed under Th2 cell differentiation conditions (low-dose antigen) (Figure 6B), and this expression was markedly downregulated by both increasing antigen dose and coculture in IL-12 (Figure 6B).
T106 0-259 Sentence denotes In contrast, high amounts of GATA-3 mRNA expression were only observed under Th2 cell differentiation conditions (low-dose antigen) (Figure 6B), and this expression was markedly downregulated by both increasing antigen dose and coculture in IL-12 (Figure 6B).

events-check-again

Id Subject Object Predicate Lexical cue
T13373 29-35 Protein denotes GATA-3
T13374 36-51 Transcription denotes mRNA expression
T13375 178-191 Negative_regulation denotes downregulated
T13376 241-246 Protein denotes IL-12
R10453 T13373 T13374 themeOf GATA-3,mRNA expression
R10454 T13374 T13375 themeOf mRNA expression,downregulated
R10455 T13376 T13375 causeOf IL-12,downregulated

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T13451 29-40 Protein denotes GATA-3 mRNA
T13452 41-51 Gene_expression denotes expression
T13453 178-191 Negative_regulation denotes downregulated
R10512 T13451 T13452 themeOf GATA-3 mRNA,expression
R10513 T13452 T13453 themeOf expression,downregulated

test2

Id Subject Object Predicate Lexical cue
T11794 29-35 Protein denotes GATA-3
T11795 36-51 Transcription denotes mRNA expression
T11796 154-164 Gene_expression denotes expression
T11797 178-191 Negative_regulation denotes downregulated
T11798 241-246 Protein denotes IL-12
R9102 T11794 T11795 themeOf GATA-3,mRNA expression
R9103 T11795 T11797 themeOf mRNA expression,downregulated
R9104 T11796 T11797 themeOf expression,downregulated
R9105 T11798 T11797 causeOf IL-12,downregulated