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PMC:2791889 / 16151-16502 JSONTXT

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bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T9844 41-45 P27361 denotes ERK1
T9845 50-54 P28482 denotes ERK2
T9846 213-217 P27361 denotes ERK1
T9847 222-226 P28482 denotes ERK2
T9848 257-262 P29459 denotes IL-12
T9849 257-262 P29460 denotes IL-12

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T9296 41-45 Protein denotes ERK1
T9297 50-54 Protein denotes ERK2
T9298 55-65 Positive_regulation denotes activation
T9299 55-65 Positive_regulation denotes activation
T9300 190-198 Positive_regulation denotes enhanced
T9301 190-198 Positive_regulation denotes enhanced
T9302 203-212 Positive_regulation denotes prolonged
T9303 203-212 Positive_regulation denotes prolonged
T9304 213-217 Protein denotes ERK1
T9305 222-226 Protein denotes ERK2
T9306 227-237 Positive_regulation denotes activation
T9307 227-237 Positive_regulation denotes activation
T9308 257-262 Protein denotes IL-12
R7100 T9296 T9299 themeOf ERK1,activation
R7101 T9297 T9298 themeOf ERK2,activation
R7102 T9304 T9307 themeOf ERK1,activation
R7103 T9305 T9306 themeOf ERK2,activation
R7104 T9306 T9300 themeOf activation,enhanced
R7105 T9306 T9302 themeOf activation,prolonged
R7106 T9307 T9301 themeOf activation,enhanced
R7107 T9307 T9303 themeOf activation,prolonged
R7108 T9308 T9301 causeOf IL-12,enhanced
R7109 T9308 T9300 causeOf IL-12,enhanced

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T9494 0-8 IN denotes Although
T9495 9-12 DT denotes the
T9496 13-21 JJ denotes apparent
T9497 22-26 NN denotes peak
T9498 27-30 CC denotes and
T9499 31-37 NN denotes amount
T9500 38-40 IN denotes of
T9501 41-45 NN denotes ERK1
T9502 46-49 CC denotes and
T9503 50-54 NN denotes ERK2
T9504 55-65 NN denotes activation
T9505 66-72 VB denotes varied
T9506 73-81 RB denotes slightly
T9507 82-89 IN denotes between
T9508 90-101 NN denotes experiments
T9509 101-102 -COMMA- denotes ,
T9510 103-104 DT denotes a
T9511 105-115 JJ denotes consistent
T9512 116-123 NN denotes finding
T9513 124-127 VB denotes was
T9514 128-132 IN denotes that
T9515 133-137 JJ denotes high
T9516 138-145 NN denotes antigen
T9517 146-150 NN denotes dose
T9518 151-165 VB denotes differentiated
T9519 166-169 NN denotes Th1
T9520 170-175 NN denotes cells
T9521 176-182 RB denotes always
T9522 183-189 VB denotes showed
T9523 190-198 VB denotes enhanced
T9524 199-202 CC denotes and
T9525 203-212 JJ denotes prolonged
T9526 213-217 NN denotes ERK1
T9527 218-221 CC denotes and
T9528 222-226 NN denotes ERK2
T9529 227-237 NN denotes activation
T9530 238-240 IN denotes in
T9531 241-244 DT denotes the
T9532 245-253 NN denotes presence
T9533 254-256 IN denotes of
T9534 257-262 NN denotes IL-12
T9535 262-263 -COMMA- denotes ,
T9536 264-274 RB denotes regardless
T9537 275-277 IN denotes of
T9538 278-285 IN denotes whether
T9539 286-290 PRP denotes they
T9540 291-295 VB denotes were
T9541 296-308 VB denotes restimulated
T9542 309-313 IN denotes with
T9543 314-318 JJ denotes high
T9544 319-321 CC denotes or
T9545 322-325 JJ denotes low
T9546 326-333 NN denotes antigen
T9547 334-338 NN denotes dose
T9548 339-340 -LRB- denotes (
T9549 340-349 NN denotes Figure 5B
T9550 349-350 -RRB- denotes )
R7270 T9497 T9498 arg1Of peak,and
R7271 T9498 T9495 arg1Of and,the
R7272 T9498 T9496 arg1Of and,apparent
R7273 T9498 T9500 arg1Of and,of
R7274 T9498 T9505 arg1Of and,varied
R7275 T9499 T9498 arg2Of amount,and
R7276 T9501 T9502 arg1Of ERK1,and
R7277 T9503 T9502 arg2Of ERK2,and
R7278 T9504 T9500 arg2Of activation,of
R7279 T9504 T9501 arg1Of activation,ERK1
R7280 T9504 T9503 arg1Of activation,ERK2
R7281 T9505 T9494 arg2Of varied,Although
R7282 T9505 T9506 arg1Of varied,slightly
R7283 T9505 T9507 arg1Of varied,between
R7284 T9508 T9507 arg2Of experiments,between
R7285 T9512 T9510 arg1Of finding,a
R7286 T9512 T9511 arg1Of finding,consistent
R7287 T9512 T9513 arg1Of finding,was
R7288 T9513 T9494 arg1Of was,Although
R7289 T9513 T9509 arg1Of was,","
R7290 T9517 T9515 arg1Of dose,high
R7291 T9517 T9516 arg1Of dose,antigen
R7292 T9517 T9518 arg1Of dose,differentiated
R7293 T9518 T9513 arg2Of differentiated,was
R7294 T9518 T9514 arg1Of differentiated,that
R7295 T9519 T9522 modOf Th1,showed
R7296 T9519 T9537 arg1Of Th1,of
R7297 T9520 T9522 arg1Of cells,showed
R7298 T9522 T9521 arg1Of showed,always
R7299 T9522 T9535 arg1Of showed,","
R7300 T9522 T9536 arg1Of showed,regardless
R7301 T9523 T9524 arg1Of enhanced,and
R7302 T9525 T9524 arg2Of prolonged,and
R7303 T9526 T9523 arg1Of ERK1,enhanced
R7304 T9526 T9525 arg1Of ERK1,prolonged
R7305 T9526 T9527 arg1Of ERK1,and
R7306 T9527 T9522 arg2Of and,showed
R7307 T9527 T9530 arg1Of and,in
R7308 T9529 T9527 arg2Of activation,and
R7309 T9529 T9528 arg1Of activation,ERK2
R7310 T9532 T9530 arg2Of presence,in
R7311 T9532 T9531 arg1Of presence,the
R7312 T9532 T9533 arg1Of presence,of
R7313 T9534 T9533 arg2Of IL-12,of
R7314 T9539 T9540 arg1Of they,were
R7315 T9539 T9541 arg2Of they,restimulated
R7316 T9541 T9537 arg2Of restimulated,of
R7317 T9541 T9538 arg1Of restimulated,whether
R7318 T9541 T9540 arg2Of restimulated,were
R7319 T9541 T9542 arg1Of restimulated,with
R7320 T9543 T9542 arg2Of high,with
R7321 T9547 T9518 arg2Of dose,differentiated
R7322 T9547 T9519 arg1Of dose,Th1
R7323 T9547 T9544 arg1Of dose,or
R7324 T9547 T9545 arg1Of dose,low
R7325 T9547 T9546 arg1Of dose,antigen
R7326 T9547 T9548 arg1Of dose,(
R7327 T9549 T9548 arg2Of Figure 5B,(
R7328 T9550 T9548 arg3Of ),(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T10003 0-8 IN denotes Although
T10004 9-12 DT denotes the
T10005 13-21 JJ denotes apparent
T10006 22-26 NN denotes peak
T10007 27-30 CC denotes and
T10008 31-37 NN denotes amount
T10009 38-40 IN denotes of
T10010 41-45 CD denotes ERK1
T10011 46-49 CC denotes and
T10012 50-54 CD denotes ERK2
T10013 55-65 NN denotes activation
T10014 66-72 VBD denotes varied
T10015 73-81 RB denotes slightly
T10016 82-89 IN denotes between
T10017 90-101 NNS denotes experiments
T10018 101-102 , denotes ,
T10019 103-104 DT denotes a
T10020 105-115 JJ denotes consistent
T10021 116-123 NN denotes finding
T10022 124-127 VBD denotes was
T10023 128-132 DT denotes that
T10024 133-137 JJ denotes high
T10025 138-145 NN denotes antigen
T10026 146-150 NN denotes dose
T10027 151-165 VBD denotes differentiated
T10028 166-169 CD denotes Th1
T10029 170-175 NNS denotes cells
T10030 176-182 RB denotes always
T10031 183-189 VBD denotes showed
T10032 190-198 JJ denotes enhanced
T10033 199-202 CC denotes and
T10034 203-212 JJ denotes prolonged
T10035 213-217 CD denotes ERK1
T10036 218-221 CC denotes and
T10037 222-226 CD denotes ERK2
T10038 227-237 NN denotes activation
T10039 238-240 IN denotes in
T10040 241-244 DT denotes the
T10041 245-253 NN denotes presence
T10042 254-256 IN denotes of
T10043 257-262 NN denotes IL-12
T10044 262-263 , denotes ,
T10045 264-274 RB denotes regardless
T10046 275-277 IN denotes of
T10047 278-285 IN denotes whether
T10048 286-290 PRP denotes they
T10049 291-295 VBD denotes were
T10050 296-308 VBN denotes restimulated
T10051 309-313 IN denotes with
T10052 314-318 JJ denotes high
T10053 319-321 CC denotes or
T10054 322-325 JJ denotes low
T10055 326-333 NN denotes antigen
T10056 334-338 NN denotes dose
T10057 339-340 -LRB- denotes (
T10058 340-346 NN denotes Figure
T10059 347-349 NN denotes 5B
T10060 349-350 -RRB- denotes )
T10061 350-351 . denotes .
R7744 T10024 T10025 amod high,antigen
R7745 T10025 T10026 compound antigen,dose
R7746 T10026 T10027 nsubj dose,differentiated
R7747 T10027 T10022 conj differentiated,was
R7748 T10028 T10029 nummod Th1,cells
R7749 T10029 T10027 dobj cells,differentiated
R7750 T10030 T10031 advmod always,showed
R7751 T10031 T10027 conj showed,differentiated
R7752 T10032 T10035 amod enhanced,ERK1
R7753 T10033 T10032 cc and,enhanced
R7754 T10034 T10032 conj prolonged,enhanced
R7755 T10035 T10031 dobj ERK1,showed
R7756 T10036 T10035 cc and,ERK1
R7757 T10037 T10038 nummod ERK2,activation
R7758 T10038 T10035 conj activation,ERK1
R7759 T10039 T10038 prep in,activation
R7760 T10040 T10041 det the,presence
R7761 T10041 T10039 pobj presence,in
R7762 T10042 T10041 prep of,presence
R7763 T10043 T10042 pobj IL-12,of
R7764 T10044 T10027 punct ",",differentiated
R7765 T10045 T10027 advmod regardless,differentiated
R7766 T10046 T10045 prep of,regardless
R7767 T10047 T10050 mark whether,restimulated
R7768 T10048 T10050 nsubjpass they,restimulated
R7769 T10049 T10050 auxpass were,restimulated
R7770 T10050 T10046 pcomp restimulated,of
R7771 T10051 T10050 prep with,restimulated
R7772 T10052 T10056 amod high,dose
R7773 T10053 T10052 cc or,high
R7774 T10054 T10052 conj low,high
R7775 T10055 T10056 compound antigen,dose
R7776 T10056 T10051 pobj dose,with
R7777 T10057 T10056 punct (,dose
R7778 T10058 T10059 compound Figure,5B
R7779 T10059 T10056 appos 5B,dose
R7780 T10060 T10056 punct ),dose
R7781 T10061 T10027 punct .,differentiated
R7723 T10003 T10014 mark Although,varied
R7724 T10004 T10006 det the,peak
R7725 T10005 T10006 amod apparent,peak
R7726 T10006 T10014 nsubj peak,varied
R7727 T10007 T10006 cc and,peak
R7728 T10008 T10006 conj amount,peak
R7729 T10009 T10008 prep of,amount
R7730 T10010 T10009 pobj ERK1,of
R7731 T10011 T10010 cc and,ERK1
R7732 T10012 T10010 conj ERK2,ERK1
R7733 T10013 T10008 conj activation,amount
R7734 T10014 T10022 advcl varied,was
R7735 T10015 T10014 advmod slightly,varied
R7736 T10016 T10014 prep between,varied
R7737 T10017 T10016 pobj experiments,between
R7738 T10018 T10022 punct ",",was
R7739 T10019 T10021 det a,finding
R7740 T10020 T10021 amod consistent,finding
R7741 T10021 T10022 nsubj finding,was
R7742 T10022 T10022 ROOT was,was
R7743 T10023 T10026 det that,dose

GO-BP

Id Subject Object Predicate Lexical cue
T10392 41-45 http://purl.obolibrary.org/obo/GO_0004707 denotes ERK1
T10393 213-217 http://purl.obolibrary.org/obo/GO_0004707 denotes ERK1
T10398 50-54 http://purl.obolibrary.org/obo/GO_0004707 denotes ERK2
T10399 222-226 http://purl.obolibrary.org/obo/GO_0004707 denotes ERK2
T10408 41-65 http://purl.obolibrary.org/obo/GO_0070374 denotes ERK1 and ERK2 activation
T10409 213-237 http://purl.obolibrary.org/obo/GO_0070374 denotes ERK1 and ERK2 activation

GO-MF

Id Subject Object Predicate Lexical cue
T10431 41-45 http://purl.obolibrary.org/obo/GO_0004707 denotes ERK1
T10432 213-217 http://purl.obolibrary.org/obo/GO_0004707 denotes ERK1
T10437 50-54 http://purl.obolibrary.org/obo/GO_0004707 denotes ERK2
T10438 222-226 http://purl.obolibrary.org/obo/GO_0004707 denotes ERK2
T10445 257-262 http://purl.obolibrary.org/obo/GO_0005143 denotes IL-12

GO-CC

Id Subject Object Predicate Lexical cue
T10457 170-175 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T9383 0-351 Sentence denotes Although the apparent peak and amount of ERK1 and ERK2 activation varied slightly between experiments, a consistent finding was that high antigen dose differentiated Th1 cells always showed enhanced and prolonged ERK1 and ERK2 activation in the presence of IL-12, regardless of whether they were restimulated with high or low antigen dose (Figure 5B).
T84 0-351 Sentence denotes Although the apparent peak and amount of ERK1 and ERK2 activation varied slightly between experiments, a consistent finding was that high antigen dose differentiated Th1 cells always showed enhanced and prolonged ERK1 and ERK2 activation in the presence of IL-12, regardless of whether they were restimulated with high or low antigen dose (Figure 5B).

events-check-again

Id Subject Object Predicate Lexical cue
T10713 41-45 Protein denotes ERK1
T10714 50-54 Protein denotes ERK2
T10715 55-65 Positive_regulation denotes activation
T10716 55-65 Positive_regulation denotes activation
T10717 190-198 Positive_regulation denotes enhanced
T10718 190-198 Positive_regulation denotes enhanced
T10719 203-212 Positive_regulation denotes prolonged
T10720 203-212 Positive_regulation denotes prolonged
T10721 213-217 Protein denotes ERK1
T10722 222-226 Protein denotes ERK2
T10723 227-237 Positive_regulation denotes activation
T10724 227-237 Positive_regulation denotes activation
T10725 257-262 Protein denotes IL-12
R8271 T10713 T10716 themeOf ERK1,activation
R8272 T10714 T10715 themeOf ERK2,activation
R8273 T10721 T10724 themeOf ERK1,activation
R8274 T10722 T10723 themeOf ERK2,activation
R8275 T10723 T10717 themeOf activation,enhanced
R8276 T10723 T10719 themeOf activation,prolonged
R8277 T10724 T10718 themeOf activation,enhanced
R8278 T10724 T10720 themeOf activation,prolonged
R8279 T10725 T10718 causeOf IL-12,enhanced
R8280 T10725 T10717 causeOf IL-12,enhanced

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T10813 41-45 Protein denotes ERK1
T10814 50-54 Protein denotes ERK2
T10815 213-217 Protein denotes ERK1
T10816 222-226 Protein denotes ERK2
T10817 257-262 Protein denotes IL-12
T10818 55-65 Positive_regulation denotes activation
T10819 55-65 Positive_regulation denotes activation
T10820 227-237 Positive_regulation denotes activation
T10821 227-237 Positive_regulation denotes activation
T10822 203-212 Positive_regulation denotes prolonged
T10823 203-212 Positive_regulation denotes prolonged
R8343 T10813 T10818 themeOf ERK1,activation
R8344 T10814 T10819 themeOf ERK2,activation
R8345 T10815 T10820 themeOf ERK1,activation
R8346 T10816 T10821 themeOf ERK2,activation
R8347 T10820 T10822 themeOf activation,prolonged
R8348 T10821 T10823 themeOf activation,prolonged

test2

Id Subject Object Predicate Lexical cue
T9206 41-45 Protein denotes ERK1
T9207 50-54 Protein denotes ERK2
T9208 55-65 Positive_regulation denotes activation
T9209 190-198 Positive_regulation denotes enhanced
T9210 203-212 Positive_regulation denotes prolonged
T9211 213-217 Protein denotes ERK1
T9212 222-226 Protein denotes ERK2
T9213 227-237 Positive_regulation denotes activation
T9214 257-262 Protein denotes IL-12
R7037 T9206 T9208 themeOf ERK1,activation
R7038 T9207 T9208 themeOf ERK2,activation
R7039 T9208 T9209 themeOf activation,enhanced
R7040 T9211 T9213 themeOf ERK1,activation
R7041 T9212 T9213 themeOf ERK2,activation
R7042 T9213 T9210 themeOf activation,prolonged