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PMC:2674207 / 40631-40820
Annnotations
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
19436703-17277157-86274499 | 185-187 | 17277157 | denotes | 12 |
T69957 | 185-187 | 17277157 | denotes | 12 |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T13458 | 0-2 | PRP | denotes | We |
T13459 | 3-7 | VB | denotes | have |
T13460 | 8-18 | RB | denotes | previously |
T13461 | 19-24 | VB | denotes | shown |
T13462 | 25-29 | IN | denotes | that |
T13463 | 30-43 | NN | denotes | translocation |
T13464 | 44-46 | IN | denotes | of |
T13465 | 47-53 | NN | denotes | GATA-3 |
T13466 | 54-58 | IN | denotes | from |
T13467 | 59-62 | DT | denotes | the |
T13468 | 63-72 | NN | denotes | cytoplasm |
T13469 | 73-75 | TO | denotes | to |
T13470 | 76-79 | DT | denotes | the |
T13471 | 80-87 | NN | denotes | nucleus |
T13472 | 88-96 | VB | denotes | involves |
T13473 | 97-100 | DT | denotes | the |
T13474 | 101-108 | JJ | denotes | nuclear |
T13475 | 109-120 | NN | denotes | transporter |
T13476 | 121-128 | NN | denotes | protein |
T13477 | 129-139 | NN | denotes | importin-α |
T13478 | 139-140 | -COMMA- | denotes | , |
T13479 | 141-146 | WDT | denotes | which |
T13480 | 147-156 | VB | denotes | interacts |
T13481 | 157-161 | IN | denotes | with |
T13482 | 162-176 | VB | denotes | phosphorylated |
T13483 | 177-183 | NN | denotes | GATA-3 |
T13484 | 184-185 | -LRB- | denotes | [ |
T13485 | 185-187 | CD | denotes | 12 |
T13486 | 187-188 | -RRB- | denotes | ] |
R11531 | T13458 | T13459 | arg1Of | We,have |
R11532 | T13458 | T13461 | arg1Of | We,shown |
R11533 | T13461 | T13459 | arg2Of | shown,have |
R11534 | T13461 | T13460 | arg1Of | shown,previously |
R11535 | T13463 | T13464 | arg1Of | translocation,of |
R11536 | T13463 | T13469 | arg1Of | translocation,to |
R11537 | T13463 | T13472 | arg1Of | translocation,involves |
R11538 | T13465 | T13464 | arg2Of | GATA-3,of |
R11539 | T13465 | T13466 | arg1Of | GATA-3,from |
R11540 | T13468 | T13466 | arg2Of | cytoplasm,from |
R11541 | T13468 | T13467 | arg1Of | cytoplasm,the |
R11542 | T13471 | T13469 | arg2Of | nucleus,to |
R11543 | T13471 | T13470 | arg1Of | nucleus,the |
R11544 | T13472 | T13461 | arg2Of | involves,shown |
R11545 | T13472 | T13462 | arg1Of | involves,that |
R11546 | T13477 | T13472 | arg2Of | importin-α,involves |
R11547 | T13477 | T13473 | arg1Of | importin-α,the |
R11548 | T13477 | T13474 | arg1Of | importin-α,nuclear |
R11549 | T13477 | T13475 | arg1Of | importin-α,transporter |
R11550 | T13477 | T13476 | arg1Of | importin-α,protein |
R11551 | T13477 | T13478 | arg1Of | importin-α,"," |
R11552 | T13477 | T13479 | arg1Of | importin-α,which |
R11553 | T13477 | T13480 | arg1Of | importin-α,interacts |
R11554 | T13480 | T13481 | arg1Of | interacts,with |
R11555 | T13480 | T13484 | arg1Of | interacts,[ |
R11556 | T13483 | T13481 | arg2Of | GATA-3,with |
R11557 | T13483 | T13482 | arg2Of | GATA-3,phosphorylated |
R11558 | T13485 | T13484 | arg2Of | 12,[ |
R11559 | T13486 | T13484 | arg3Of | ],[ |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14419 | 0-2 | PRP | denotes | We |
T14420 | 3-7 | VBP | denotes | have |
T14421 | 8-18 | RB | denotes | previously |
T14422 | 19-24 | VBN | denotes | shown |
T14423 | 25-29 | IN | denotes | that |
T14424 | 30-43 | NN | denotes | translocation |
T14425 | 44-46 | IN | denotes | of |
T14426 | 47-53 | NN | denotes | GATA-3 |
T14427 | 54-58 | IN | denotes | from |
T14428 | 59-62 | DT | denotes | the |
T14429 | 63-72 | NN | denotes | cytoplasm |
T14430 | 73-75 | TO | denotes | to |
T14431 | 76-79 | DT | denotes | the |
T14432 | 80-87 | NN | denotes | nucleus |
T14433 | 88-96 | VBZ | denotes | involves |
T14434 | 97-100 | DT | denotes | the |
T14435 | 101-108 | JJ | denotes | nuclear |
T14436 | 109-120 | NN | denotes | transporter |
T14437 | 121-128 | NN | denotes | protein |
T14438 | 129-139 | NN | denotes | importin-α |
T14439 | 139-140 | , | denotes | , |
T14440 | 141-146 | WDT | denotes | which |
T14441 | 147-156 | VBZ | denotes | interacts |
T14442 | 157-161 | IN | denotes | with |
T14443 | 162-176 | VBN | denotes | phosphorylated |
T14444 | 177-183 | NNP | denotes | GATA-3 |
T14445 | 184-185 | NNP | denotes | [ |
T14446 | 185-187 | CD | denotes | 12 |
T14447 | 187-188 | NNP | denotes | ] |
T14448 | 188-189 | . | denotes | . |
R12458 | T14446 | T14447 | nummod | 12,] |
R12459 | T14447 | T14445 | appos | ],[ |
R12460 | T14448 | T14422 | punct | .,shown |
R12431 | T14419 | T14422 | nsubj | We,shown |
R12432 | T14420 | T14422 | aux | have,shown |
R12433 | T14421 | T14422 | advmod | previously,shown |
R12434 | T14422 | T14422 | ROOT | shown,shown |
R12435 | T14423 | T14433 | mark | that,involves |
R12436 | T14424 | T14433 | nsubj | translocation,involves |
R12437 | T14425 | T14424 | prep | of,translocation |
R12438 | T14426 | T14425 | pobj | GATA-3,of |
R12439 | T14427 | T14424 | prep | from,translocation |
R12440 | T14428 | T14429 | det | the,cytoplasm |
R12441 | T14429 | T14427 | pobj | cytoplasm,from |
R12442 | T14430 | T14424 | prep | to,translocation |
R12443 | T14431 | T14432 | det | the,nucleus |
R12444 | T14432 | T14430 | pobj | nucleus,to |
R12445 | T14433 | T14422 | ccomp | involves,shown |
R12446 | T14434 | T14437 | det | the,protein |
R12447 | T14435 | T14436 | amod | nuclear,transporter |
R12448 | T14436 | T14437 | compound | transporter,protein |
R12449 | T14437 | T14438 | compound | protein,importin-α |
R12450 | T14438 | T14433 | dobj | importin-α,involves |
R12451 | T14439 | T14438 | punct | ",",importin-α |
R12452 | T14440 | T14441 | nsubj | which,interacts |
R12453 | T14441 | T14438 | relcl | interacts,importin-α |
R12454 | T14442 | T14441 | prep | with,interacts |
R12455 | T14443 | T14445 | amod | phosphorylated,[ |
R12456 | T14444 | T14445 | compound | GATA-3,[ |
R12457 | T14445 | T14442 | pobj | [,with |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15318 | 63-72 | http://purl.obolibrary.org/obo/GO_0005737 | denotes | cytoplasm |
T15319 | 80-87 | http://purl.obolibrary.org/obo/GO_0005634 | denotes | nucleus |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T13326 | 0-189 | Sentence | denotes | We have previously shown that translocation of GATA-3 from the cytoplasm to the nucleus involves the nuclear transporter protein importin-α, which interacts with phosphorylated GATA-3 [12]. |
T265 | 0-189 | Sentence | denotes | We have previously shown that translocation of GATA-3 from the cytoplasm to the nucleus involves the nuclear transporter protein importin-α, which interacts with phosphorylated GATA-3 [12]. |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15811 | 30-43 | Localization | denotes | translocation |
T15812 | 47-53 | Protein | denotes | GATA-3 |
T15813 | 80-87 | Entity | denotes | nucleus |
T15814 | 88-96 | Regulation | denotes | involves |
T15815 | 147-156 | Binding | denotes | interacts |
T15816 | 162-176 | Phosphorylation | denotes | phosphorylated |
T15817 | 177-183 | Protein | denotes | GATA-3 |
R13589 | T15811 | T15814 | themeOf | translocation,involves |
R13590 | T15812 | T15811 | themeOf | GATA-3,translocation |
R13591 | T15813 | T15811 | locationOf | nucleus,translocation |
R13592 | T15817 | T15815 | themeOf | GATA-3,interacts |
R13593 | T15817 | T15816 | themeOf | GATA-3,phosphorylated |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15678 | 47-53 | Protein | denotes | GATA-3 |
T15679 | 101-139 | Protein | denotes | nuclear transporter protein importin-α |
T15680 | 80-87 | Entity | denotes | nucleus |
T15681 | 147-156 | Binding | denotes | interacts |
T15682 | 30-43 | Localization | denotes | translocation |
R13532 | T15678 | T15682 | themeOf | GATA-3,translocation |
R13541 | T15679 | T15681 | themeOf | nuclear transporter protein importin-α,interacts |
R13544 | T15680 | T15682 | locationOf | nucleus,translocation |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T13188 | 30-43 | Localization | denotes | translocation |
T13189 | 47-53 | Protein | denotes | GATA-3 |
T13190 | 80-87 | Entity | denotes | nucleus |
T13191 | 88-96 | Regulation | denotes | involves |
T13192 | 147-156 | Binding | denotes | interacts |
T13193 | 162-176 | Phosphorylation | denotes | phosphorylated |
T13194 | 177-183 | Protein | denotes | GATA-3 |
R11313 | T13188 | T13191 | themeOf | translocation,involves |
R11314 | T13189 | T13188 | themeOf | GATA-3,translocation |
R11315 | T13190 | T13188 | locationOf | nucleus,translocation |
R11316 | T13194 | T13192 | themeOf | GATA-3,interacts |
R11317 | T13194 | T13193 | themeOf | GATA-3,phosphorylated |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14241 | 47-53 | P23771 | denotes | GATA-3 |
T14242 | 177-183 | P23771 | denotes | GATA-3 |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T13032 | 30-43 | Localization | denotes | translocation |
T13033 | 47-53 | Protein | denotes | GATA-3 |
T13034 | 80-87 | Entity | denotes | nucleus |
T13035 | 88-96 | Positive_regulation | denotes | involves |
T13036 | 147-156 | Binding | denotes | interacts |
T13037 | 162-176 | Phosphorylation | denotes | phosphorylated |
T13038 | 177-183 | Protein | denotes | GATA-3 |
R11197 | T13032 | T13035 | themeOf | translocation,involves |
R11198 | T13033 | T13032 | themeOf | GATA-3,translocation |
R11199 | T13034 | T13032 | locationOf | nucleus,translocation |
R11200 | T13038 | T13037 | themeOf | GATA-3,phosphorylated |
R11201 | T13038 | T13036 | themeOf | GATA-3,interacts |