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PMC:2674207 / 30668-30927 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T9898 0-5 VB denotes Using
T9899 6-8 DT denotes an
T9900 9-11 FW denotes in
T9901 12-17 FW denotes vitro
T9902 18-29 NN denotes competition
T9903 30-35 NN denotes assay
T9904 36-37 -LRB- denotes (
T9905 37-43 NN denotes Figure
T9906 44-46 NN denotes 4A
T9907 46-47 -RRB- denotes )
T9908 48-57 VB denotes utilizing
T9909 58-66 VB denotes purified
T9910 67-76 VB denotes activated
T9911 77-83 NN denotes GATA-3
T9912 83-84 -COMMA- denotes ,
T9913 85-95 NN denotes importin-α
T9914 95-96 -COMMA- denotes ,
T9915 97-100 CC denotes and
T9916 101-110 VB denotes activated
T9917 111-113 NN denotes GR
T9918 113-114 -COMMA- denotes ,
T9919 115-117 PRP denotes we
T9920 118-130 VB denotes demonstrated
T9921 131-135 IN denotes that
T9922 136-145 VB denotes activated
T9923 146-148 NN denotes GR
T9924 149-162 RB denotes significantly
T9925 163-172 VB denotes increased
T9926 173-186 JJ denotes GR-importin-α
T9927 187-198 NN denotes association
T9928 199-201 IN denotes in
T9929 202-205 DT denotes the
T9930 206-214 NN denotes presence
T9931 215-218 CC denotes and
T9932 219-226 NN denotes absence
T9933 227-229 IN denotes of
T9934 230-239 VB denotes activated
T9935 240-246 NN denotes GATA-3
T9936 247-248 -LRB- denotes (
T9937 248-254 NN denotes Figure
T9938 255-257 NN denotes 4B
T9939 257-258 -RRB- denotes )
R8503 T9898 T9908 modOf Using,utilizing
R8504 T9901 T9900 arg1Of vitro,in
R8505 T9903 T9898 arg2Of assay,Using
R8506 T9903 T9899 arg1Of assay,an
R8507 T9903 T9901 arg1Of assay,vitro
R8508 T9903 T9902 arg1Of assay,competition
R8509 T9903 T9904 arg1Of assay,(
R8510 T9906 T9904 arg2Of 4A,(
R8511 T9906 T9905 arg1Of 4A,Figure
R8512 T9907 T9904 arg3Of ),(
R8513 T9911 T9909 arg2Of GATA-3,purified
R8514 T9911 T9910 arg2Of GATA-3,activated
R8515 T9911 T9912 arg1Of GATA-3,","
R8516 T9912 T9915 arg1Of ",",and
R8517 T9913 T9912 arg2Of importin-α,","
R8518 T9915 T9908 arg2Of and,utilizing
R8519 T9915 T9914 arg1Of and,","
R8520 T9917 T9915 arg2Of GR,and
R8521 T9917 T9916 arg2Of GR,activated
R8522 T9919 T9920 arg1Of we,demonstrated
R8523 T9920 T9898 modOf demonstrated,Using
R8524 T9920 T9918 arg1Of demonstrated,","
R8525 T9923 T9922 arg2Of GR,activated
R8526 T9923 T9925 arg1Of GR,increased
R8527 T9925 T9920 arg2Of increased,demonstrated
R8528 T9925 T9921 arg1Of increased,that
R8529 T9925 T9924 arg1Of increased,significantly
R8530 T9925 T9928 arg1Of increased,in
R8531 T9927 T9925 arg2Of association,increased
R8532 T9927 T9926 arg1Of association,GR-importin-α
R8533 T9930 T9931 arg1Of presence,and
R8534 T9931 T9928 arg2Of and,in
R8535 T9931 T9929 arg1Of and,the
R8536 T9932 T9931 arg2Of absence,and
R8537 T9935 T9925 arg3Of GATA-3,increased
R8538 T9935 T9933 arg1Of GATA-3,of
R8539 T9935 T9934 arg2Of GATA-3,activated
R8540 T9935 T9936 arg1Of GATA-3,(
R8541 T9938 T9936 arg2Of 4B,(
R8542 T9938 T9937 arg1Of 4B,Figure
R8543 T9939 T9936 arg3Of ),(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T10412 0-5 VBG denotes Using
T10413 6-8 DT denotes an
T10414 9-11 IN denotes in
T10415 12-17 NN denotes vitro
T10416 18-29 NN denotes competition
T10417 30-35 NN denotes assay
T10418 36-37 -LRB- denotes (
T10419 37-43 NN denotes Figure
T10420 44-46 NN denotes 4A
T10421 46-47 -RRB- denotes )
T10422 48-57 VBG denotes utilizing
T10423 58-66 JJ denotes purified
T10424 67-76 VBN denotes activated
T10425 77-83 NN denotes GATA-3
T10426 83-84 , denotes ,
T10427 85-95 NN denotes importin-α
T10428 95-96 , denotes ,
T10429 97-100 CC denotes and
T10430 101-110 VBD denotes activated
T10431 111-113 NNP denotes GR
T10432 113-114 , denotes ,
T10433 115-117 PRP denotes we
T10434 118-130 VBD denotes demonstrated
T10435 131-135 IN denotes that
T10436 136-145 VBN denotes activated
T10437 146-148 NNP denotes GR
T10438 149-162 RB denotes significantly
T10439 163-172 VBD denotes increased
T10440 173-186 JJ denotes GR-importin-α
T10441 187-198 NN denotes association
T10442 199-201 IN denotes in
T10443 202-205 DT denotes the
T10444 206-214 NN denotes presence
T10445 215-218 CC denotes and
T10446 219-226 NN denotes absence
T10447 227-229 IN denotes of
T10448 230-239 VBN denotes activated
T10449 240-246 NNP denotes GATA-3
T10450 247-248 -LRB- denotes (
T10451 248-254 NNP denotes Figure
T10452 255-257 NNP denotes 4B
T10453 257-258 -RRB- denotes )
T10454 258-259 . denotes .
R8962 T10412 T10434 advcl Using,demonstrated
R8963 T10413 T10417 det an,assay
R8964 T10414 T10417 nmod in,assay
R8965 T10415 T10416 amod vitro,competition
R8966 T10416 T10417 compound competition,assay
R8967 T10417 T10412 dobj assay,Using
R8968 T10418 T10420 punct (,4A
R8969 T10419 T10420 compound Figure,4A
R8970 T10420 T10417 appos 4A,assay
R8971 T10421 T10420 punct ),4A
R8989 T10439 T10434 conj increased,demonstrated
R8990 T10440 T10441 amod GR-importin-α,association
R8991 T10441 T10439 dobj association,increased
R8992 T10442 T10439 prep in,increased
R8993 T10443 T10444 det the,presence
R8994 T10444 T10442 pobj presence,in
R8995 T10445 T10444 cc and,presence
R8996 T10446 T10444 conj absence,presence
R8997 T10447 T10446 prep of,absence
R8998 T10448 T10449 amod activated,GATA-3
R8999 T10449 T10447 pobj GATA-3,of
R9000 T10450 T10452 punct (,4B
R9001 T10451 T10452 compound Figure,4B
R9002 T10452 T10449 appos 4B,GATA-3
R9003 T10453 T10449 punct ),GATA-3
R9004 T10454 T10439 punct .,increased
R8972 T10422 T10417 acl utilizing,assay
R8973 T10423 T10425 amod purified,GATA-3
R8974 T10424 T10425 amod activated,GATA-3
R8975 T10425 T10422 dobj GATA-3,utilizing
R8976 T10426 T10425 punct ",",GATA-3
R8977 T10427 T10425 conj importin-α,GATA-3
R8978 T10428 T10412 punct ",",Using
R8979 T10429 T10412 cc and,Using
R8980 T10430 T10434 advcl activated,demonstrated
R8981 T10431 T10430 dobj GR,activated
R8982 T10432 T10434 punct ",",demonstrated
R8983 T10433 T10434 nsubj we,demonstrated
R8984 T10434 T10434 ROOT demonstrated,demonstrated
R8985 T10435 T10436 mark that,activated
R8986 T10436 T10434 ccomp activated,demonstrated
R8987 T10437 T10439 nsubj GR,increased
R8988 T10438 T10439 advmod significantly,increased

sentences

Id Subject Object Predicate Lexical cue
T9693 0-259 Sentence denotes Using an in vitro competition assay (Figure 4A) utilizing purified activated GATA-3, importin-α, and activated GR, we demonstrated that activated GR significantly increased GR-importin-α association in the presence and absence of activated GATA-3 (Figure 4B).
T215 0-259 Sentence denotes Using an in vitro competition assay (Figure 4A) utilizing purified activated GATA-3, importin-α, and activated GR, we demonstrated that activated GR significantly increased GR-importin-α association in the presence and absence of activated GATA-3 (Figure 4B).

events-check-again

Id Subject Object Predicate Lexical cue Negation
T11021 18-29 Negative_regulation denotes competition
T11022 18-29 Negative_regulation denotes competition
T11023 67-76 Positive_regulation denotes activated
T11024 77-83 Protein denotes GATA-3
T11025 101-110 Positive_regulation denotes activated
T11026 111-113 Protein denotes GR
T11027 136-145 Positive_regulation denotes activated
T11028 146-148 Protein denotes GR
T11029 163-172 Positive_regulation denotes increased
T11030 173-175 Protein denotes GR
T11031 187-198 Binding denotes association
T11032 199-229 Regulation denotes in the presence and absence of true
T11033 230-239 Positive_regulation denotes activated
T11034 240-246 Protein denotes GATA-3
R9442 T11024 T11021 themeOf GATA-3,competition
R9443 T11024 T11023 themeOf GATA-3,activated
R9444 T11026 T11022 themeOf GR,competition
R9445 T11026 T11025 themeOf GR,activated
R9446 T11028 T11027 themeOf GR,activated
R9447 T11028 T11029 causeOf GR,increased
R9448 T11029 T11032 themeOf increased,in the presence and absence of
R9449 T11030 T11031 themeOf GR,association
R9450 T11031 T11029 themeOf association,increased
R9451 T11033 T11032 causeOf activated,in the presence and absence of
R9452 T11034 T11033 themeOf GATA-3,activated

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T10952 77-83 Protein denotes GATA-3
T10953 85-95 Protein denotes importin-α
T10954 111-113 Protein denotes GR
T10955 146-148 Protein denotes GR
T10956 173-175 Protein denotes GR
T10957 67-76 Positive_regulation denotes activated
T10958 67-76 Positive_regulation denotes activated
T10959 101-110 Positive_regulation denotes activated
T10960 136-145 Positive_regulation denotes activated
R9397 T10952 T10957 themeOf GATA-3,activated
R9398 T10953 T10958 themeOf importin-α,activated
R9399 T10954 T10959 themeOf GR,activated
R9400 T10955 T10960 themeOf GR,activated

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Negation
T9613 18-29 Negative_regulation denotes competition
T9614 18-29 Negative_regulation denotes competition
T9615 67-76 Positive_regulation denotes activated
T9616 77-83 Protein denotes GATA-3
T9617 101-110 Positive_regulation denotes activated
T9618 111-113 Protein denotes GR
T9619 136-145 Positive_regulation denotes activated
T9620 146-148 Protein denotes GR
T9621 163-172 Positive_regulation denotes increased
T9622 173-175 Protein denotes GR
T9623 187-198 Binding denotes association
T9624 199-229 Regulation denotes in the presence and absence of true
T9625 230-239 Positive_regulation denotes activated
T9626 240-246 Protein denotes GATA-3
R8252 T9616 T9613 themeOf GATA-3,competition
R8253 T9616 T9615 themeOf GATA-3,activated
R8254 T9618 T9614 themeOf GR,competition
R8255 T9618 T9617 themeOf GR,activated
R8256 T9620 T9619 themeOf GR,activated
R8257 T9620 T9621 causeOf GR,increased
R8258 T9621 T9624 themeOf increased,in the presence and absence of
R8259 T9622 T9623 themeOf GR,association
R8260 T9623 T9621 themeOf association,increased
R8261 T9625 T9624 causeOf activated,in the presence and absence of
R8262 T9626 T9625 themeOf GATA-3,activated

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T10166 77-83 P23771 denotes GATA-3
T10167 111-113 P04150 denotes GR
T10168 146-148 P04150 denotes GR
T10169 173-175 P04150 denotes GR
T10170 240-246 P23771 denotes GATA-3

test2

Id Subject Object Predicate Lexical cue Negation
T9510 67-76 Positive_regulation denotes activated
T9511 77-83 Protein denotes GATA-3
T9512 101-110 Positive_regulation denotes activated
T9513 111-113 Protein denotes GR
T9514 136-145 Positive_regulation denotes activated true
T9515 146-148 Protein denotes GR
T9516 163-172 Positive_regulation denotes increased
T9517 173-175 Protein denotes GR true
T9518 187-198 Binding denotes association
T9519 219-226 Negative_regulation denotes absence
T9520 230-239 Positive_regulation denotes activated
T9521 240-246 Protein denotes GATA-3
R8174 T9511 T9510 themeOf GATA-3,activated
R8175 T9513 T9512 themeOf GR,activated
R8176 T9515 T9514 themeOf GR,activated
R8177 T9515 T9516 causeOf GR,increased
R8178 T9517 T9518 themeOf GR,association
R8179 T9518 T9516 themeOf association,increased
R8180 T9521 T9520 themeOf GATA-3,activated