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PMC:2674207 / 20082-20278 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T6827 0-3 NN denotes DNA
T6828 4-7 VB denotes was
T6829 8-17 VB denotes recovered
T6830 18-20 IN denotes by
T6831 21-27 NN denotes phenol
T6832 28-38 NN denotes extraction
T6833 39-42 CC denotes and
T6834 43-50 NN denotes ethanol
T6835 51-64 NN denotes precipitation
T6836 64-65 -COMMA- denotes ,
T6837 66-69 CC denotes and
T6838 70-74 CC denotes both
T6839 75-78 DT denotes the
T6840 79-85 NN denotes GATA-3
T6841 86-94 NN denotes fragment
T6842 95-98 CC denotes and
T6843 99-102 DT denotes the
T6844 103-111 NN denotes pEGFP-C2
T6845 112-118 NN denotes vector
T6846 119-130 JJ denotes blunt-ended
T6847 131-133 IN denotes by
T6848 134-144 NN denotes incubation
T6849 145-149 IN denotes with
T6850 150-156 NNP denotes Klenow
T6851 157-158 -LRB- denotes (
T6852 158-165 NN denotes Bioline
T6853 166-175 NN denotes Bio-27029
T6854 175-176 -RRB- denotes )
T6855 177-180 IN denotes for
T6856 181-183 CD denotes 30
T6857 184-187 NN denotes min
T6858 188-190 IN denotes at
T6859 191-196 NNP denotes 37°C.
R5863 T6827 T6828 arg1Of DNA,was
R5864 T6827 T6829 arg2Of DNA,recovered
R5865 T6829 T6828 arg2Of recovered,was
R5866 T6832 T6831 arg1Of extraction,phenol
R5867 T6832 T6833 arg1Of extraction,and
R5868 T6833 T6829 arg1Of and,recovered
R5869 T6833 T6830 arg2Of and,by
R5870 T6835 T6833 arg2Of precipitation,and
R5871 T6835 T6834 arg1Of precipitation,ethanol
R5872 T6837 T6836 arg1Of and,","
R5873 T6841 T6839 arg1Of fragment,the
R5874 T6841 T6840 arg1Of fragment,GATA-3
R5875 T6841 T6842 arg1Of fragment,and
R5876 T6842 T6838 arg1Of and,both
R5877 T6845 T6842 arg2Of vector,and
R5878 T6845 T6843 arg1Of vector,the
R5879 T6845 T6844 arg1Of vector,pEGFP-C2
R5880 T6845 T6846 arg1Of vector,blunt-ended
R5881 T6848 T6847 arg2Of incubation,by
R5882 T6850 T6849 arg2Of Klenow,with
R5883 T6852 T6851 arg2Of Bioline,(
R5884 T6852 T6853 arg1Of Bioline,Bio-27029
R5885 T6854 T6851 arg3Of ),(
R5886 T6857 T6855 arg2Of min,for
R5887 T6857 T6856 arg1Of min,30

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T6992 0-3 NNP denotes DNA
T6993 4-7 VBD denotes was
T6994 8-17 VBN denotes recovered
T6995 18-20 IN denotes by
T6996 21-27 NN denotes phenol
T6997 28-38 NN denotes extraction
T6998 39-42 CC denotes and
T6999 43-50 NN denotes ethanol
T7000 51-64 NN denotes precipitation
T7001 64-65 , denotes ,
T7002 66-69 CC denotes and
T7003 70-74 DT denotes both
T7004 75-78 DT denotes the
T7005 79-85 NNP denotes GATA-3
T7006 86-94 NN denotes fragment
T7007 95-98 CC denotes and
T7008 99-102 DT denotes the
T7009 103-111 NN denotes pEGFP-C2
T7010 112-118 NN denotes vector
T7011 119-130 JJ denotes blunt-ended
T7012 131-133 IN denotes by
T7013 134-144 NN denotes incubation
T7014 145-149 IN denotes with
T7015 150-156 NNP denotes Klenow
T7016 157-158 -LRB- denotes (
T7017 158-165 NNP denotes Bioline
T7018 166-175 NNP denotes Bio-27029
T7019 175-176 -RRB- denotes )
T7020 177-180 IN denotes for
T7021 181-183 CD denotes 30
T7022 184-187 NN denotes min
T7023 188-190 IN denotes at
T7024 191-193 CD denotes 37
T7025 193-194 CD denotes °
T7026 194-196 NNP denotes C.
R6013 T6992 T6994 nsubjpass DNA,recovered
R6014 T6993 T6994 auxpass was,recovered
R6015 T6994 T6994 ROOT recovered,recovered
R6016 T6995 T6994 agent by,recovered
R6017 T6996 T6997 compound phenol,extraction
R6018 T6997 T6995 pobj extraction,by
R6019 T6998 T6997 cc and,extraction
R6020 T6999 T7000 compound ethanol,precipitation
R6021 T7000 T6997 conj precipitation,extraction
R6022 T7001 T6994 punct ",",recovered
R6023 T7002 T6994 cc and,recovered
R6024 T7003 T7006 preconj both,fragment
R6025 T7004 T7006 det the,fragment
R6026 T7005 T7006 compound GATA-3,fragment
R6028 T7007 T7006 cc and,fragment
R6029 T7008 T7010 det the,vector
R6030 T7009 T7010 compound pEGFP-C2,vector
R6031 T7010 T7006 conj vector,fragment
R6032 T7011 T7006 acl blunt-ended,fragment
R6033 T7012 T7011 agent by,blunt-ended
R6034 T7013 T7012 pobj incubation,by
R6035 T7014 T7011 prep with,blunt-ended
R6036 T7015 T7014 pobj Klenow,with
R6037 T7016 T7015 punct (,Klenow
R6038 T7017 T7018 compound Bioline,Bio-27029
R6039 T7018 T7015 appos Bio-27029,Klenow
R6040 T7019 T7015 punct ),Klenow
R6041 T7020 T7011 prep for,blunt-ended
R6042 T7021 T7022 nummod 30,min
R6043 T7022 T7020 pobj min,for
R6044 T7023 T7022 prep at,min
R6045 T7024 T7025 nummod 37,°

sentences

Id Subject Object Predicate Lexical cue
T143 0-196 Sentence denotes DNA was recovered by phenol extraction and ethanol precipitation, and both the GATA-3 fragment and the pEGFP-C2 vector blunt-ended by incubation with Klenow (Bioline Bio-27029) for 30 min at 37°C.

events-check-again

Id Subject Object Predicate Lexical cue
T7162 79-85 Protein denotes GATA-3

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T7150 79-94 Protein denotes GATA-3 fragment
T7151 103-108 Protein denotes pEGFP
T7152 109-111 Protein denotes C2

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T6768 79-85 Protein denotes GATA-3

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T6932 79-85 P23771 denotes GATA-3

test2

Id Subject Object Predicate Lexical cue
T6755 79-85 Protein denotes GATA-3