PMC:2664230 / 9788-10041 JSONTXT

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    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T4134","span":{"begin":41,"end":55},"obj":"Phosphorylation"},{"id":"T4135","span":{"begin":56,"end":61},"obj":"Protein"},{"id":"T4136","span":{"begin":130,"end":144},"obj":"Phosphorylation"},{"id":"T4137","span":{"begin":151,"end":154},"obj":"Protein"}],"relations":[{"id":"R3371","pred":"themeOf","subj":"T4135","obj":"T4134"},{"id":"R3372","pred":"themeOf","subj":"T4137","obj":"T4136"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Cytoplasmic extracts were incubated with phosphorylated I-κBα antibody (1:200), while nuclear extracts were incubated with either phosphorylated NF-κB p65 antibody (1:500) or phosphorylated CREB antibody (1:500) overnight at 4°C in separate experiments."}

    pmc-enju-pas

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extracts were incubated with phosphorylated I-κBα antibody (1:200), while nuclear extracts were incubated with either phosphorylated NF-κB p65 antibody (1:500) or phosphorylated CREB antibody (1:500) overnight at 4°C in separate experiments."}

    bionlp-st-ge-2016-spacy-parsed

    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extracts were incubated with phosphorylated I-κBα antibody (1:200), while nuclear extracts were incubated with either phosphorylated NF-κB p65 antibody (1:500) or phosphorylated CREB antibody (1:500) overnight at 4°C in separate experiments."}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T4827","span":{"begin":62,"end":70},"obj":"http://purl.obolibrary.org/obo/GO_0003823"},{"id":"T4828","span":{"begin":155,"end":163},"obj":"http://purl.obolibrary.org/obo/GO_0003823"},{"id":"T4829","span":{"begin":195,"end":203},"obj":"http://purl.obolibrary.org/obo/GO_0003823"}],"text":"Cytoplasmic extracts were incubated with phosphorylated I-κBα antibody (1:200), while nuclear extracts were incubated with either phosphorylated NF-κB p65 antibody (1:500) or phosphorylated CREB antibody (1:500) overnight at 4°C in separate experiments."}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T4838","span":{"begin":62,"end":70},"obj":"http://purl.obolibrary.org/obo/GO_0019815"},{"id":"T4839","span":{"begin":155,"end":163},"obj":"http://purl.obolibrary.org/obo/GO_0019815"},{"id":"T4840","span":{"begin":195,"end":203},"obj":"http://purl.obolibrary.org/obo/GO_0019815"},{"id":"T4843","span":{"begin":62,"end":70},"obj":"http://purl.obolibrary.org/obo/GO_0042571"},{"id":"T4844","span":{"begin":155,"end":163},"obj":"http://purl.obolibrary.org/obo/GO_0042571"},{"id":"T4845","span":{"begin":195,"end":203},"obj":"http://purl.obolibrary.org/obo/GO_0042571"}],"text":"Cytoplasmic extracts were incubated with phosphorylated I-κBα antibody (1:200), while nuclear extracts were incubated with either phosphorylated NF-κB p65 antibody (1:500) or phosphorylated CREB antibody (1:500) overnight at 4°C in separate experiments."}

    sentences

    {"project":"sentences","denotations":[{"id":"T4146","span":{"begin":0,"end":253},"obj":"Sentence"},{"id":"T75","span":{"begin":0,"end":253},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Cytoplasmic extracts were incubated with phosphorylated I-κBα antibody (1:200), while nuclear extracts were incubated with either phosphorylated NF-κB p65 antibody (1:500) or phosphorylated CREB antibody (1:500) overnight at 4°C in separate experiments."}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T4884","span":{"begin":41,"end":55},"obj":"Phosphorylation"},{"id":"T4885","span":{"begin":56,"end":61},"obj":"Protein"},{"id":"T4886","span":{"begin":130,"end":144},"obj":"Phosphorylation"},{"id":"T4887","span":{"begin":151,"end":154},"obj":"Protein"}],"relations":[{"id":"R4030","pred":"themeOf","subj":"T4885","obj":"T4884"},{"id":"R4031","pred":"themeOf","subj":"T4887","obj":"T4886"}],"text":"Cytoplasmic extracts were incubated with phosphorylated I-κBα antibody (1:200), while nuclear extracts were incubated with either phosphorylated NF-κB p65 antibody (1:500) or phosphorylated CREB antibody (1:500) overnight at 4°C in separate experiments."}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T4853","span":{"begin":56,"end":70},"obj":"Protein"},{"id":"T4854","span":{"begin":145,"end":163},"obj":"Protein"},{"id":"T4855","span":{"begin":190,"end":194},"obj":"Protein"},{"id":"T4856","span":{"begin":41,"end":55},"obj":"Phosphorylation"},{"id":"T4857","span":{"begin":175,"end":189},"obj":"Phosphorylation"},{"id":"T4858","span":{"begin":175,"end":189},"obj":"Phosphorylation"}],"relations":[{"id":"R4021","pred":"themeOf","subj":"T4853","obj":"T4856"},{"id":"R4022","pred":"themeOf","subj":"T4854","obj":"T4857"},{"id":"R4023","pred":"themeOf","subj":"T4855","obj":"T4858"}],"text":"Cytoplasmic extracts were incubated with phosphorylated I-κBα antibody (1:200), while nuclear extracts were incubated with either phosphorylated NF-κB p65 antibody (1:500) or phosphorylated CREB antibody (1:500) overnight at 4°C in separate experiments."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T4798","span":{"begin":151,"end":154},"obj":"Q04206"},{"id":"T4799","span":{"begin":151,"end":154},"obj":"P21579"},{"id":"T4800","span":{"begin":190,"end":194},"obj":"P15336"},{"id":"T4801","span":{"begin":190,"end":194},"obj":"P18848"},{"id":"T4802","span":{"begin":190,"end":194},"obj":"P16220"},{"id":"T4803","span":{"begin":190,"end":194},"obj":"Q02930"},{"id":"T4804","span":{"begin":190,"end":194},"obj":"Q8TEY5"},{"id":"T4805","span":{"begin":190,"end":194},"obj":"O43889"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Cytoplasmic extracts were incubated with phosphorylated I-κBα antibody (1:200), while nuclear extracts were incubated with either phosphorylated NF-κB p65 antibody (1:500) or phosphorylated CREB antibody (1:500) overnight at 4°C in separate experiments."}

    test2

    {"project":"test2","denotations":[{"id":"T4124","span":{"begin":41,"end":55},"obj":"Phosphorylation"},{"id":"T4125","span":{"begin":56,"end":61},"obj":"Protein"},{"id":"T4126","span":{"begin":130,"end":144},"obj":"Phosphorylation"},{"id":"T4127","span":{"begin":151,"end":154},"obj":"Protein"}],"relations":[{"id":"R3369","pred":"themeOf","subj":"T4125","obj":"T4124"},{"id":"R3370","pred":"themeOf","subj":"T4127","obj":"T4126"}],"text":"Cytoplasmic extracts were incubated with phosphorylated I-κBα antibody (1:200), while nuclear extracts were incubated with either phosphorylated NF-κB p65 antibody (1:500) or phosphorylated CREB antibody (1:500) overnight at 4°C in separate experiments."}