PMC:2664230 / 819-975
Annnotations
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T68 | 20-34 | Phosphorylation | denotes | phosphorylated |
T69 | 47-52 | Protein | denotes | I-κBα |
T70 | 72-75 | Protein | denotes | p65 |
R36 | T69 | T68 | themeOf | I-κBα,phosphorylated |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T571 | 0-7 | JJ | denotes | Western |
T572 | 8-16 | NN | denotes | blotting |
T573 | 17-19 | IN | denotes | of |
T574 | 20-34 | VB | denotes | phosphorylated |
T575 | 35-46 | JJ | denotes | cytoplasmic |
T576 | 47-52 | NN | denotes | I-κBα |
T577 | 52-53 | -COMMA- | denotes | , |
T578 | 54-61 | JJ | denotes | nuclear |
T579 | 62-71 | NN | denotes | factor-κB |
T580 | 72-75 | NN | denotes | p65 |
T581 | 76-77 | -LRB- | denotes | ( |
T582 | 77-82 | NN | denotes | NF-κB |
T583 | 82-83 | -RRB- | denotes | ) |
T584 | 83-84 | -COMMA- | denotes | , |
T585 | 85-88 | CC | denotes | and |
T586 | 89-96 | JJ | denotes | nuclear |
T587 | 97-110 | JJ | denotes | cAMP-response |
T588 | 111-118 | NN | denotes | element |
T589 | 119-126 | NN | denotes | binding |
T590 | 127-134 | NN | denotes | protein |
T591 | 135-136 | -LRB- | denotes | ( |
T592 | 136-140 | NN | denotes | CREB |
T593 | 140-141 | -RRB- | denotes | ) |
T594 | 142-145 | VB | denotes | was |
T595 | 146-155 | VB | denotes | performed |
R462 | T572 | T571 | arg1Of | blotting,Western |
R463 | T572 | T573 | arg1Of | blotting,of |
R464 | T572 | T594 | arg1Of | blotting,was |
R465 | T572 | T595 | arg2Of | blotting,performed |
R466 | T576 | T574 | arg2Of | I-κBα,phosphorylated |
R467 | T576 | T575 | arg1Of | I-κBα,cytoplasmic |
R468 | T576 | T577 | arg1Of | I-κBα,"," |
R469 | T577 | T585 | arg1Of | ",",and |
R470 | T580 | T577 | arg2Of | p65,"," |
R471 | T580 | T578 | arg1Of | p65,nuclear |
R472 | T580 | T579 | arg1Of | p65,factor-κB |
R473 | T580 | T581 | arg1Of | p65,( |
R474 | T582 | T581 | arg2Of | NF-κB,( |
R475 | T583 | T581 | arg3Of | ),( |
R476 | T585 | T573 | arg2Of | and,of |
R477 | T585 | T584 | arg1Of | and,"," |
R478 | T590 | T585 | arg2Of | protein,and |
R479 | T590 | T586 | arg1Of | protein,nuclear |
R480 | T590 | T587 | arg1Of | protein,cAMP-response |
R481 | T590 | T588 | arg1Of | protein,element |
R482 | T590 | T589 | arg1Of | protein,binding |
R483 | T590 | T591 | arg1Of | protein,( |
R484 | T592 | T591 | arg2Of | CREB,( |
R485 | T593 | T591 | arg3Of | ),( |
R486 | T595 | T594 | arg2Of | performed,was |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T257 | 0-7 | JJ | denotes | Western |
T258 | 8-16 | VBG | denotes | blotting |
T259 | 17-19 | IN | denotes | of |
T260 | 20-34 | VBN | denotes | phosphorylated |
T261 | 35-46 | JJ | denotes | cytoplasmic |
T262 | 47-52 | NNP | denotes | I-κBα |
T263 | 52-53 | , | denotes | , |
T264 | 54-61 | JJ | denotes | nuclear |
T265 | 62-71 | NNP | denotes | factor-κB |
T266 | 72-75 | NNS | denotes | p65 |
T267 | 76-77 | -LRB- | denotes | ( |
T268 | 77-82 | NN | denotes | NF-κB |
T269 | 82-83 | -RRB- | denotes | ) |
T270 | 83-84 | , | denotes | , |
T271 | 85-88 | CC | denotes | and |
T272 | 89-96 | JJ | denotes | nuclear |
T273 | 97-110 | JJ | denotes | cAMP-response |
T274 | 111-118 | NN | denotes | element |
T275 | 119-126 | JJ | denotes | binding |
T276 | 127-134 | NN | denotes | protein |
T277 | 135-136 | -LRB- | denotes | ( |
T278 | 136-140 | NNP | denotes | CREB |
T279 | 140-141 | -RRB- | denotes | ) |
T280 | 142-145 | VBD | denotes | was |
T281 | 146-155 | VBN | denotes | performed |
T282 | 155-156 | . | denotes | . |
R155 | T257 | T258 | amod | Western,blotting |
R156 | T258 | T281 | nsubjpass | blotting,performed |
R157 | T259 | T258 | prep | of,blotting |
R158 | T260 | T262 | amod | phosphorylated,I-κBα |
R159 | T261 | T262 | compound | cytoplasmic,I-κBα |
R160 | T262 | T259 | pobj | I-κBα,of |
R161 | T263 | T262 | punct | ",",I-κBα |
R162 | T264 | T266 | amod | nuclear,p65 |
R163 | T265 | T266 | compound | factor-κB,p65 |
R164 | T266 | T262 | appos | p65,I-κBα |
R165 | T267 | T266 | punct | (,p65 |
R166 | T268 | T266 | appos | NF-κB,p65 |
R167 | T269 | T266 | punct | ),p65 |
R168 | T270 | T266 | punct | ",",p65 |
R169 | T271 | T266 | cc | and,p65 |
R170 | T272 | T274 | amod | nuclear,element |
R171 | T273 | T274 | amod | cAMP-response,element |
R172 | T274 | T276 | compound | element,protein |
R173 | T275 | T276 | amod | binding,protein |
R174 | T276 | T266 | conj | protein,p65 |
R175 | T277 | T278 | punct | (,CREB |
R176 | T278 | T276 | appos | CREB,protein |
R177 | T279 | T276 | punct | ),protein |
R178 | T280 | T281 | auxpass | was,performed |
R179 | T281 | T281 | ROOT | performed,performed |
R180 | T282 | T281 | punct | .,performed |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T859 | 97-110 | http://purl.obolibrary.org/obo/GO_0051591 | denotes | cAMP-response |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T870 | 119-126 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
T875 | 119-134 | http://purl.obolibrary.org/obo/GO_0005515 | denotes | binding protein |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T119 | 0-156 | Sentence | denotes | Western blotting of phosphorylated cytoplasmic I-κBα, nuclear factor-κB p65 (NF-κB), and nuclear cAMP-response element binding protein (CREB) was performed. |
T11 | 0-156 | Sentence | denotes | Western blotting of phosphorylated cytoplasmic I-κBα, nuclear factor-κB p65 (NF-κB), and nuclear cAMP-response element binding protein (CREB) was performed. |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T898 | 20-34 | Phosphorylation | denotes | phosphorylated |
T899 | 47-52 | Protein | denotes | I-κBα |
T900 | 72-75 | Protein | denotes | p65 |
R657 | T899 | T898 | themeOf | I-κBα,phosphorylated |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T933 | 20-52 | Protein | denotes | phosphorylated cytoplasmic I-κBα |
T934 | 54-71 | Protein | denotes | nuclear factor-κB |
T935 | 72-75 | Protein | denotes | p65 |
T936 | 77-82 | Protein | denotes | NF-κB |
T937 | 89-134 | Protein | denotes | nuclear cAMP-response element binding protein |
T938 | 136-140 | Protein | denotes | CREB |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T766 | 72-75 | P21579 | denotes | p65 |
T767 | 72-75 | Q04206 | denotes | p65 |
T768 | 97-134 | O43889 | denotes | cAMP-response element binding protein |
T769 | 97-134 | P15336 | denotes | cAMP-response element binding protein |
T770 | 97-134 | P18848 | denotes | cAMP-response element binding protein |
T771 | 97-134 | Q8TEY5 | denotes | cAMP-response element binding protein |
T772 | 97-134 | Q02930 | denotes | cAMP-response element binding protein |
T773 | 97-134 | P16220 | denotes | cAMP-response element binding protein |
T774 | 136-140 | P16220 | denotes | CREB |
T775 | 136-140 | O43889 | denotes | CREB |
T776 | 136-140 | Q8TEY5 | denotes | CREB |
T777 | 136-140 | Q02930 | denotes | CREB |
T778 | 136-140 | P18848 | denotes | CREB |
T779 | 136-140 | P15336 | denotes | CREB |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T41 | 20-34 | Phosphorylation | denotes | phosphorylated |
T42 | 47-52 | Protein | denotes | I-κBα |
T43 | 72-75 | Protein | denotes | p65 |
R25 | T42 | T41 | themeOf | I-κBα,phosphorylated |