
PMC:2664230 / 446-644
Annnotations
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T64 | 137-143 | Regulation | denotes | alters |
T65 | 144-149 | Protein | denotes | TNF-α |
T66 | 150-160 | Gene_expression | denotes | production |
T67 | 161-179 | Positive_regulation | denotes | in the presence of |
R33 | T64 | T67 | themeOf | alters,in the presence of |
R34 | T65 | T66 | themeOf | TNF-α,production |
R35 | T66 | T64 | themeOf | production,alters |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T511 | 7-10 | NN | denotes | LPS |
T512 | 11-22 | NN | denotes | stimulation |
T513 | 23-25 | VB | denotes | is |
T514 | 26-29 | CD | denotes | one |
T515 | 30-32 | IN | denotes | of |
T516 | 33-36 | DT | denotes | the |
T517 | 37-40 | JJ | denotes | key |
T518 | 41-46 | NN | denotes | steps |
T519 | 47-49 | IN | denotes | in |
T520 | 50-59 | JJ | denotes | bacterial |
T521 | 60-66 | NN | denotes | sepsis |
T522 | 67-70 | CC | denotes | and |
T523 | 71-83 | NN | denotes | inflammation |
T524 | 85-88 | DT | denotes | The |
T525 | 89-98 | NN | denotes | mechanism |
T526 | 99-101 | IN | denotes | by |
T527 | 102-107 | WDT | denotes | which |
T528 | 108-125 | NN | denotes | phosphodiesterase |
T529 | 126-136 | NN | denotes | inhibition |
T530 | 137-143 | VB | denotes | alters |
T531 | 144-149 | NN | denotes | TNF-α |
T532 | 150-160 | NN | denotes | production |
T533 | 161-163 | IN | denotes | in |
T534 | 164-167 | DT | denotes | the |
T535 | 168-176 | NN | denotes | presence |
T536 | 177-179 | IN | denotes | of |
T537 | 180-183 | NN | denotes | LPS |
T538 | 184-191 | VB | denotes | remains |
R405 | T512 | T511 | arg1Of | stimulation,LPS |
R406 | T514 | T513 | arg2Of | one,is |
R407 | T514 | T515 | arg1Of | one,of |
R408 | T518 | T515 | arg2Of | steps,of |
R409 | T518 | T516 | arg1Of | steps,the |
R410 | T518 | T517 | arg1Of | steps,key |
R411 | T518 | T519 | arg1Of | steps,in |
R412 | T521 | T522 | arg1Of | sepsis,and |
R413 | T522 | T519 | arg2Of | and,in |
R414 | T522 | T520 | arg1Of | and,bacterial |
R415 | T523 | T522 | arg2Of | inflammation,and |
R416 | T525 | T524 | arg1Of | mechanism,The |
R417 | T525 | T526 | arg2Of | mechanism,by |
R418 | T525 | T527 | arg1Of | mechanism,which |
R419 | T525 | T538 | arg1Of | mechanism,remains |
R421 | T529 | T528 | arg1Of | inhibition,phosphodiesterase |
R422 | T529 | T530 | arg1Of | inhibition,alters |
R423 | T530 | T526 | arg1Of | alters,by |
R424 | T530 | T533 | arg1Of | alters,in |
R425 | T532 | T530 | arg2Of | production,alters |
R426 | T532 | T531 | arg1Of | production,TNF-α |
R427 | T535 | T533 | arg2Of | presence,in |
R428 | T535 | T534 | arg1Of | presence,the |
R429 | T535 | T536 | arg1Of | presence,of |
R430 | T537 | T536 | arg2Of | LPS,of |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T192 | 7-10 | NNP | denotes | LPS |
T193 | 11-22 | NN | denotes | stimulation |
T194 | 23-25 | VBZ | denotes | is |
T195 | 26-29 | CD | denotes | one |
T196 | 30-32 | IN | denotes | of |
T197 | 33-36 | DT | denotes | the |
T198 | 37-40 | JJ | denotes | key |
T199 | 41-46 | NNS | denotes | steps |
T200 | 47-49 | IN | denotes | in |
T201 | 50-59 | JJ | denotes | bacterial |
T202 | 60-66 | NN | denotes | sepsis |
T203 | 67-70 | CC | denotes | and |
T204 | 71-83 | NN | denotes | inflammation |
T205 | 83-84 | . | denotes | . |
T206 | 85-88 | DT | denotes | The |
T207 | 89-98 | NN | denotes | mechanism |
T208 | 99-101 | IN | denotes | by |
T209 | 102-107 | WDT | denotes | which |
T210 | 108-125 | NN | denotes | phosphodiesterase |
T211 | 126-136 | NN | denotes | inhibition |
T212 | 137-143 | VBZ | denotes | alters |
T213 | 144-149 | JJ | denotes | TNF-α |
T214 | 150-160 | NN | denotes | production |
T215 | 161-163 | IN | denotes | in |
T216 | 164-167 | DT | denotes | the |
T217 | 168-176 | NN | denotes | presence |
T218 | 177-179 | IN | denotes | of |
T219 | 180-183 | NNP | denotes | LPS |
T220 | 184-191 | VBZ | denotes | remains |
R90 | T192 | T193 | compound | LPS,stimulation |
R92 | T194 | T194 | ROOT | is,is |
R93 | T195 | T194 | attr | one,is |
R94 | T196 | T195 | prep | of,one |
R95 | T197 | T199 | det | the,steps |
R96 | T198 | T199 | amod | key,steps |
R97 | T199 | T196 | pobj | steps,of |
R98 | T200 | T199 | prep | in,steps |
R99 | T201 | T202 | amod | bacterial,sepsis |
R103 | T205 | T194 | punct | .,is |
R104 | T206 | T207 | det | The,mechanism |
R105 | T207 | T220 | nsubj | mechanism,remains |
R106 | T208 | T212 | prep | by,alters |
R107 | T209 | T208 | pobj | which,by |
R108 | T210 | T211 | amod | phosphodiesterase,inhibition |
R109 | T211 | T212 | nsubj | inhibition,alters |
R110 | T212 | T207 | relcl | alters,mechanism |
R111 | T213 | T214 | amod | TNF-α,production |
R112 | T214 | T212 | dobj | production,alters |
R113 | T215 | T212 | prep | in,alters |
R114 | T216 | T217 | det | the,presence |
R115 | T217 | T215 | pobj | presence,in |
R116 | T218 | T217 | prep | of,presence |
R117 | T219 | T218 | pobj | LPS,of |
R118 | T220 | T220 | ROOT | remains,remains |
R100 | T202 | T200 | pobj | sepsis,in |
R101 | T203 | T202 | cc | and,sepsis |
R102 | T204 | T202 | conj | inflammation,sepsis |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T828 | 144-160 | http://purl.obolibrary.org/obo/GO_0032680 | denotes | TNF-α production |
T839 | 108-125 | http://purl.obolibrary.org/obo/GO_0008081 | denotes | phosphodiesterase |
T856 | 71-83 | http://purl.obolibrary.org/obo/GO_0006954 | denotes | inflammation |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T866 | 108-125 | http://purl.obolibrary.org/obo/GO_0008081 | denotes | phosphodiesterase |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T894 | 137-143 | Regulation | denotes | alters |
T895 | 144-149 | Protein | denotes | TNF-α |
T896 | 150-160 | Gene_expression | denotes | production |
T897 | 161-179 | Positive_regulation | denotes | in the presence of |
R654 | T894 | T897 | themeOf | alters,in the presence of |
R655 | T895 | T896 | themeOf | TNF-α,production |
R656 | T896 | T894 | themeOf | production,alters |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T929 | 11-22 | Positive_regulation | denotes | stimulation |
T930 | 144-149 | Protein | denotes | TNF-α |
T931 | 150-160 | Gene_expression | denotes | production |
T932 | 137-143 | Regulation | denotes | alters |
R677 | T930 | T931 | themeOf | TNF-α,production |
R678 | T931 | T932 | themeOf | production,alters |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T764 | 144-147 | P01375 | denotes | TNF |
T765 | 144-149 | P01375 | denotes | TNF-α |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T38 | 137-143 | Regulation | denotes | alters |
T39 | 144-149 | Protein | denotes | TNF-α |
T40 | 150-160 | Gene_expression | denotes | production |
R23 | T39 | T40 | themeOf | TNF-α,production |
R24 | T40 | T38 | themeOf | production,alters |