PMC:2664230 / 419-530
Annnotations
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T61 | 4-14 | Gene_expression | denotes | production |
T62 | 18-23 | Protein | denotes | TNF-α |
T63 | 24-33 | Positive_regulation | denotes | following |
R752 | T61 | T63 | themeOf | production,following |
R753 | T62 | T61 | themeOf | TNF-α,production |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T506 | 0-3 | DT | denotes | The |
T507 | 4-14 | NN | denotes | production |
T508 | 15-17 | IN | denotes | of |
T509 | 18-23 | NN | denotes | TNF-α |
T510 | 24-33 | VB | denotes | following |
T511 | 34-37 | NN | denotes | LPS |
T512 | 38-49 | NN | denotes | stimulation |
T513 | 50-52 | VB | denotes | is |
T514 | 53-56 | CD | denotes | one |
T515 | 57-59 | IN | denotes | of |
T516 | 60-63 | DT | denotes | the |
T517 | 64-67 | JJ | denotes | key |
T518 | 68-73 | NN | denotes | steps |
T519 | 74-76 | IN | denotes | in |
T520 | 77-86 | JJ | denotes | bacterial |
T521 | 87-93 | NN | denotes | sepsis |
T522 | 94-97 | CC | denotes | and |
T523 | 98-110 | NN | denotes | inflammation |
R399 | T507 | T506 | arg1Of | production,The |
R400 | T507 | T508 | arg1Of | production,of |
R401 | T507 | T510 | arg1Of | production,following |
R402 | T507 | T513 | arg1Of | production,is |
R403 | T509 | T508 | arg2Of | TNF-α,of |
R404 | T512 | T510 | arg2Of | stimulation,following |
R405 | T512 | T511 | arg1Of | stimulation,LPS |
R406 | T514 | T513 | arg2Of | one,is |
R407 | T514 | T515 | arg1Of | one,of |
R408 | T518 | T515 | arg2Of | steps,of |
R409 | T518 | T516 | arg1Of | steps,the |
R410 | T518 | T517 | arg1Of | steps,key |
R411 | T518 | T519 | arg1Of | steps,in |
R412 | T521 | T522 | arg1Of | sepsis,and |
R413 | T522 | T519 | arg2Of | and,in |
R414 | T522 | T520 | arg1Of | and,bacterial |
R415 | T523 | T522 | arg2Of | inflammation,and |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T187 | 0-3 | DT | denotes | The |
T188 | 4-14 | NN | denotes | production |
T189 | 15-17 | IN | denotes | of |
T190 | 18-23 | NNP | denotes | TNF-α |
T191 | 24-33 | VBG | denotes | following |
T192 | 34-37 | NNP | denotes | LPS |
T193 | 38-49 | NN | denotes | stimulation |
T194 | 50-52 | VBZ | denotes | is |
T195 | 53-56 | CD | denotes | one |
T196 | 57-59 | IN | denotes | of |
T197 | 60-63 | DT | denotes | the |
T198 | 64-67 | JJ | denotes | key |
T199 | 68-73 | NNS | denotes | steps |
T200 | 74-76 | IN | denotes | in |
T201 | 77-86 | JJ | denotes | bacterial |
T202 | 87-93 | NN | denotes | sepsis |
T203 | 94-97 | CC | denotes | and |
T204 | 98-110 | NN | denotes | inflammation |
T205 | 110-111 | . | denotes | . |
R85 | T187 | T188 | det | The,production |
R86 | T188 | T194 | nsubj | production,is |
R87 | T189 | T188 | prep | of,production |
R88 | T190 | T189 | pobj | TNF-α,of |
R89 | T191 | T188 | prep | following,production |
R90 | T192 | T193 | compound | LPS,stimulation |
R91 | T193 | T191 | pobj | stimulation,following |
R92 | T194 | T194 | ROOT | is,is |
R93 | T195 | T194 | attr | one,is |
R94 | T196 | T195 | prep | of,one |
R95 | T197 | T199 | det | the,steps |
R96 | T198 | T199 | amod | key,steps |
R97 | T199 | T196 | pobj | steps,of |
R98 | T200 | T199 | prep | in,steps |
R99 | T201 | T202 | amod | bacterial,sepsis |
R103 | T205 | T194 | punct | .,is |
R100 | T202 | T200 | pobj | sepsis,in |
R101 | T203 | T202 | cc | and,sepsis |
R102 | T204 | T202 | conj | inflammation,sepsis |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T827 | 4-23 | http://purl.obolibrary.org/obo/GO_0032680 | denotes | production of TNF-α |
T835 | 4-23 | http://purl.obolibrary.org/obo/GO_0032640 | denotes | production of TNF-α |
T836 | 4-21 | http://purl.obolibrary.org/obo/GO_0032640 | denotes | production of TNF |
T856 | 98-110 | http://purl.obolibrary.org/obo/GO_0006954 | denotes | inflammation |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T115 | 0-111 | Sentence | denotes | The production of TNF-α following LPS stimulation is one of the key steps in bacterial sepsis and inflammation. |
T7 | 0-111 | Sentence | denotes | The production of TNF-α following LPS stimulation is one of the key steps in bacterial sepsis and inflammation. |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T891 | 4-14 | Gene_expression | denotes | production |
T892 | 18-23 | Protein | denotes | TNF-α |
T893 | 24-33 | Positive_regulation | denotes | following |
R652 | T891 | T893 | themeOf | production,following |
R653 | T892 | T891 | themeOf | TNF-α,production |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T927 | 18-23 | Protein | denotes | TNF-α |
T928 | 4-14 | Gene_expression | denotes | production |
T929 | 38-49 | Positive_regulation | denotes | stimulation |
R675 | T927 | T928 | themeOf | TNF-α,production |
R676 | T928 | T929 | themeOf | production,stimulation |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T762 | 18-21 | P01375 | denotes | TNF |
T763 | 18-23 | P01375 | denotes | TNF-α |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T35 | 4-14 | Gene_expression | denotes | production |
T36 | 18-23 | Protein | denotes | TNF-α |
T37 | 24-33 | Positive_regulation | denotes | following |
R21 | T35 | T37 | themeOf | production,following |
R22 | T36 | T35 | themeOf | TNF-α,production |