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PMC:2664230 / 419-530 JSONTXT

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bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T61 4-14 Gene_expression denotes production
T62 18-23 Protein denotes TNF-α
T63 24-33 Positive_regulation denotes following
R752 T61 T63 themeOf production,following
R753 T62 T61 themeOf TNF-α,production

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T506 0-3 DT denotes The
T507 4-14 NN denotes production
T508 15-17 IN denotes of
T509 18-23 NN denotes TNF-α
T510 24-33 VB denotes following
T511 34-37 NN denotes LPS
T512 38-49 NN denotes stimulation
T513 50-52 VB denotes is
T514 53-56 CD denotes one
T515 57-59 IN denotes of
T516 60-63 DT denotes the
T517 64-67 JJ denotes key
T518 68-73 NN denotes steps
T519 74-76 IN denotes in
T520 77-86 JJ denotes bacterial
T521 87-93 NN denotes sepsis
T522 94-97 CC denotes and
T523 98-110 NN denotes inflammation
R399 T507 T506 arg1Of production,The
R400 T507 T508 arg1Of production,of
R401 T507 T510 arg1Of production,following
R402 T507 T513 arg1Of production,is
R403 T509 T508 arg2Of TNF-α,of
R404 T512 T510 arg2Of stimulation,following
R405 T512 T511 arg1Of stimulation,LPS
R406 T514 T513 arg2Of one,is
R407 T514 T515 arg1Of one,of
R408 T518 T515 arg2Of steps,of
R409 T518 T516 arg1Of steps,the
R410 T518 T517 arg1Of steps,key
R411 T518 T519 arg1Of steps,in
R412 T521 T522 arg1Of sepsis,and
R413 T522 T519 arg2Of and,in
R414 T522 T520 arg1Of and,bacterial
R415 T523 T522 arg2Of inflammation,and

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T187 0-3 DT denotes The
T188 4-14 NN denotes production
T189 15-17 IN denotes of
T190 18-23 NNP denotes TNF-α
T191 24-33 VBG denotes following
T192 34-37 NNP denotes LPS
T193 38-49 NN denotes stimulation
T194 50-52 VBZ denotes is
T195 53-56 CD denotes one
T196 57-59 IN denotes of
T197 60-63 DT denotes the
T198 64-67 JJ denotes key
T199 68-73 NNS denotes steps
T200 74-76 IN denotes in
T201 77-86 JJ denotes bacterial
T202 87-93 NN denotes sepsis
T203 94-97 CC denotes and
T204 98-110 NN denotes inflammation
T205 110-111 . denotes .
R85 T187 T188 det The,production
R86 T188 T194 nsubj production,is
R87 T189 T188 prep of,production
R88 T190 T189 pobj TNF-α,of
R89 T191 T188 prep following,production
R90 T192 T193 compound LPS,stimulation
R91 T193 T191 pobj stimulation,following
R92 T194 T194 ROOT is,is
R93 T195 T194 attr one,is
R94 T196 T195 prep of,one
R95 T197 T199 det the,steps
R96 T198 T199 amod key,steps
R97 T199 T196 pobj steps,of
R98 T200 T199 prep in,steps
R99 T201 T202 amod bacterial,sepsis
R103 T205 T194 punct .,is
R100 T202 T200 pobj sepsis,in
R101 T203 T202 cc and,sepsis
R102 T204 T202 conj inflammation,sepsis

GO-BP

Id Subject Object Predicate Lexical cue
T827 4-23 http://purl.obolibrary.org/obo/GO_0032680 denotes production of TNF-α
T835 4-23 http://purl.obolibrary.org/obo/GO_0032640 denotes production of TNF-α
T836 4-21 http://purl.obolibrary.org/obo/GO_0032640 denotes production of TNF
T856 98-110 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation

sentences

Id Subject Object Predicate Lexical cue
T115 0-111 Sentence denotes The production of TNF-α following LPS stimulation is one of the key steps in bacterial sepsis and inflammation.
T7 0-111 Sentence denotes The production of TNF-α following LPS stimulation is one of the key steps in bacterial sepsis and inflammation.

events-check-again

Id Subject Object Predicate Lexical cue
T891 4-14 Gene_expression denotes production
T892 18-23 Protein denotes TNF-α
T893 24-33 Positive_regulation denotes following
R652 T891 T893 themeOf production,following
R653 T892 T891 themeOf TNF-α,production

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T927 18-23 Protein denotes TNF-α
T928 4-14 Gene_expression denotes production
T929 38-49 Positive_regulation denotes stimulation
R675 T927 T928 themeOf TNF-α,production
R676 T928 T929 themeOf production,stimulation

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T762 18-21 P01375 denotes TNF
T763 18-23 P01375 denotes TNF-α

test2

Id Subject Object Predicate Lexical cue
T35 4-14 Gene_expression denotes production
T36 18-23 Protein denotes TNF-α
T37 24-33 Positive_regulation denotes following
R21 T35 T37 themeOf production,following
R22 T36 T35 themeOf TNF-α,production