PMC:2664230 / 386-501 JSONTXT

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    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T61","span":{"begin":37,"end":47},"obj":"Gene_expression"},{"id":"T62","span":{"begin":51,"end":56},"obj":"Protein"},{"id":"T63","span":{"begin":57,"end":66},"obj":"Positive_regulation"}],"relations":[{"id":"R752","pred":"themeOf","subj":"T61","obj":"T63"},{"id":"R753","pred":"themeOf","subj":"T62","obj":"T61"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"mononuclear cells.\n\nINTRODUCTION\nThe production of TNF-α following LPS stimulation is one of the key steps in bacte"}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T503","span":{"begin":0,"end":11},"obj":"JJ"},{"id":"T504","span":{"begin":12,"end":17},"obj":"NN"},{"id":"T505","span":{"begin":20,"end":32},"obj":"NN"},{"id":"T506","span":{"begin":33,"end":36},"obj":"DT"},{"id":"T507","span":{"begin":37,"end":47},"obj":"NN"},{"id":"T508","span":{"begin":48,"end":50},"obj":"IN"},{"id":"T509","span":{"begin":51,"end":56},"obj":"NN"},{"id":"T510","span":{"begin":57,"end":66},"obj":"VB"},{"id":"T511","span":{"begin":67,"end":70},"obj":"NN"},{"id":"T512","span":{"begin":71,"end":82},"obj":"NN"},{"id":"T513","span":{"begin":83,"end":85},"obj":"VB"},{"id":"T514","span":{"begin":86,"end":89},"obj":"CD"},{"id":"T515","span":{"begin":90,"end":92},"obj":"IN"},{"id":"T516","span":{"begin":93,"end":96},"obj":"DT"},{"id":"T517","span":{"begin":97,"end":100},"obj":"JJ"},{"id":"T518","span":{"begin":101,"end":106},"obj":"NN"},{"id":"T519","span":{"begin":107,"end":109},"obj":"IN"}],"relations":[{"id":"R398","pred":"arg1Of","subj":"T504","obj":"T503"},{"id":"R399","pred":"arg1Of","subj":"T507","obj":"T506"},{"id":"R400","pred":"arg1Of","subj":"T507","obj":"T508"},{"id":"R401","pred":"arg1Of","subj":"T507","obj":"T510"},{"id":"R402","pred":"arg1Of","subj":"T507","obj":"T513"},{"id":"R403","pred":"arg2Of","subj":"T509","obj":"T508"},{"id":"R404","pred":"arg2Of","subj":"T512","obj":"T510"},{"id":"R405","pred":"arg1Of","subj":"T512","obj":"T511"},{"id":"R406","pred":"arg2Of","subj":"T514","obj":"T513"},{"id":"R407","pred":"arg1Of","subj":"T514","obj":"T515"},{"id":"R408","pred":"arg2Of","subj":"T518","obj":"T515"},{"id":"R409","pred":"arg1Of","subj":"T518","obj":"T516"},{"id":"R410","pred":"arg1Of","subj":"T518","obj":"T517"},{"id":"R411","pred":"arg1Of","subj":"T518","obj":"T519"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"mononuclear cells.\n\nINTRODUCTION\nThe production of TNF-α following LPS stimulation is one of the key steps in bacte"}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T183","span":{"begin":0,"end":11},"obj":"NN"},{"id":"T184","span":{"begin":12,"end":17},"obj":"NNS"},{"id":"T185","span":{"begin":17,"end":18},"obj":"."},{"id":"T186","span":{"begin":20,"end":32},"obj":"NNP"},{"id":"T187","span":{"begin":33,"end":36},"obj":"DT"},{"id":"T188","span":{"begin":37,"end":47},"obj":"NN"},{"id":"T189","span":{"begin":48,"end":50},"obj":"IN"},{"id":"T190","span":{"begin":51,"end":56},"obj":"NNP"},{"id":"T191","span":{"begin":57,"end":66},"obj":"VBG"},{"id":"T192","span":{"begin":67,"end":70},"obj":"NNP"},{"id":"T193","span":{"begin":71,"end":82},"obj":"NN"},{"id":"T194","span":{"begin":83,"end":85},"obj":"VBZ"},{"id":"T195","span":{"begin":86,"end":89},"obj":"CD"},{"id":"T196","span":{"begin":90,"end":92},"obj":"IN"},{"id":"T197","span":{"begin":93,"end":96},"obj":"DT"},{"id":"T198","span":{"begin":97,"end":100},"obj":"JJ"},{"id":"T199","span":{"begin":101,"end":106},"obj":"NNS"},{"id":"T200","span":{"begin":107,"end":109},"obj":"IN"}],"relations":[{"id":"R81","pred":"compound","subj":"T183","obj":"T184"},{"id":"R84","pred":"advmod","subj":"T186","obj":"T194"},{"id":"R85","pred":"det","subj":"T187","obj":"T188"},{"id":"R86","pred":"nsubj","subj":"T188","obj":"T194"},{"id":"R87","pred":"prep","subj":"T189","obj":"T188"},{"id":"R88","pred":"pobj","subj":"T190","obj":"T189"},{"id":"R89","pred":"prep","subj":"T191","obj":"T188"},{"id":"R90","pred":"compound","subj":"T192","obj":"T193"},{"id":"R91","pred":"pobj","subj":"T193","obj":"T191"},{"id":"R92","pred":"ROOT","subj":"T194","obj":"T194"},{"id":"R93","pred":"attr","subj":"T195","obj":"T194"},{"id":"R94","pred":"prep","subj":"T196","obj":"T195"},{"id":"R95","pred":"det","subj":"T197","obj":"T199"},{"id":"R96","pred":"amod","subj":"T198","obj":"T199"},{"id":"R97","pred":"pobj","subj":"T199","obj":"T196"},{"id":"R98","pred":"prep","subj":"T200","obj":"T199"}],"text":"mononuclear cells.\n\nINTRODUCTION\nThe production of TNF-α following LPS stimulation is one of the key steps in bacte"}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T827","span":{"begin":37,"end":56},"obj":"http://purl.obolibrary.org/obo/GO_0032680"},{"id":"T835","span":{"begin":37,"end":56},"obj":"http://purl.obolibrary.org/obo/GO_0032640"},{"id":"T836","span":{"begin":37,"end":54},"obj":"http://purl.obolibrary.org/obo/GO_0032640"}],"text":"mononuclear cells.\n\nINTRODUCTION\nThe production of TNF-α following LPS stimulation is one of the key steps in bacte"}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T881","span":{"begin":12,"end":17},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"mononuclear cells.\n\nINTRODUCTION\nThe production of TNF-α following LPS stimulation is one of the key steps in bacte"}

    sentences

    {"project":"sentences","denotations":[{"id":"T114","span":{"begin":20,"end":32},"obj":"Sentence"},{"id":"T6","span":{"begin":20,"end":32},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"mononuclear cells.\n\nINTRODUCTION\nThe production of TNF-α following LPS stimulation is one of the key steps in bacte"}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T891","span":{"begin":37,"end":47},"obj":"Gene_expression"},{"id":"T892","span":{"begin":51,"end":56},"obj":"Protein"},{"id":"T893","span":{"begin":57,"end":66},"obj":"Positive_regulation"}],"relations":[{"id":"R652","pred":"themeOf","subj":"T891","obj":"T893"},{"id":"R653","pred":"themeOf","subj":"T892","obj":"T891"}],"text":"mononuclear cells.\n\nINTRODUCTION\nThe production of TNF-α following LPS stimulation is one of the key steps in bacte"}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T927","span":{"begin":51,"end":56},"obj":"Protein"},{"id":"T928","span":{"begin":37,"end":47},"obj":"Gene_expression"},{"id":"T929","span":{"begin":71,"end":82},"obj":"Positive_regulation"}],"relations":[{"id":"R675","pred":"themeOf","subj":"T927","obj":"T928"},{"id":"R676","pred":"themeOf","subj":"T928","obj":"T929"}],"text":"mononuclear cells.\n\nINTRODUCTION\nThe production of TNF-α following LPS stimulation is one of the key steps in bacte"}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T762","span":{"begin":51,"end":54},"obj":"P01375"},{"id":"T763","span":{"begin":51,"end":56},"obj":"P01375"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"mononuclear cells.\n\nINTRODUCTION\nThe production of TNF-α following LPS stimulation is one of the key steps in bacte"}

    test2

    {"project":"test2","denotations":[{"id":"T35","span":{"begin":37,"end":47},"obj":"Gene_expression"},{"id":"T36","span":{"begin":51,"end":56},"obj":"Protein"},{"id":"T37","span":{"begin":57,"end":66},"obj":"Positive_regulation"}],"relations":[{"id":"R21","pred":"themeOf","subj":"T35","obj":"T37"},{"id":"R22","pred":"themeOf","subj":"T36","obj":"T35"}],"text":"mononuclear cells.\n\nINTRODUCTION\nThe production of TNF-α following LPS stimulation is one of the key steps in bacte"}