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PMC:2664230 / 336-500 JSONTXT

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bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T61 87-97 Gene_expression denotes production
T62 101-106 Protein denotes TNF-α
T63 107-116 Positive_regulation denotes following
R752 T61 T63 themeOf production,following
R753 T62 T61 themeOf TNF-α,production

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T496 5-7 IN denotes in
T497 8-26 NN denotes lipopolysaccharide
T498 27-28 -LRB- denotes (
T499 28-31 NN denotes LPS
T500 31-32 -RRB- denotes )
T501 32-43 JJ denotes -stimulated
T502 44-49 JJ denotes human
T503 50-61 JJ denotes mononuclear
T504 62-67 NN denotes cells
T505 70-82 NN denotes INTRODUCTION
T506 83-86 DT denotes The
T507 87-97 NN denotes production
T508 98-100 IN denotes of
T509 101-106 NN denotes TNF-α
T510 107-116 VB denotes following
T511 117-120 NN denotes LPS
T512 121-132 NN denotes stimulation
T513 133-135 VB denotes is
T514 136-139 CD denotes one
T515 140-142 IN denotes of
T516 143-146 DT denotes the
T517 147-150 JJ denotes key
T518 151-156 NN denotes steps
T519 157-159 IN denotes in
R391 T499 T498 arg2Of LPS,(
R392 T500 T498 arg3Of ),(
R393 T501 T497 arg1Of -stimulated,lipopolysaccharide
R394 T501 T498 arg1Of -stimulated,(
R395 T504 T496 arg2Of cells,in
R396 T504 T501 arg1Of cells,-stimulated
R397 T504 T502 arg1Of cells,human
R398 T504 T503 arg1Of cells,mononuclear
R399 T507 T506 arg1Of production,The
R400 T507 T508 arg1Of production,of
R401 T507 T510 arg1Of production,following
R402 T507 T513 arg1Of production,is
R403 T509 T508 arg2Of TNF-α,of
R404 T512 T510 arg2Of stimulation,following
R405 T512 T511 arg1Of stimulation,LPS
R406 T514 T513 arg2Of one,is
R407 T514 T515 arg1Of one,of
R408 T518 T515 arg2Of steps,of
R409 T518 T516 arg1Of steps,the
R410 T518 T517 arg1Of steps,key
R411 T518 T519 arg1Of steps,in

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T175 5-7 IN denotes in
T176 8-26 NN denotes lipopolysaccharide
T177 27-28 -LRB- denotes (
T178 28-31 NNP denotes LPS
T179 31-32 -RRB- denotes )
T180 32-33 : denotes -
T181 33-43 VBN denotes stimulated
T182 44-49 JJ denotes human
T183 50-61 NN denotes mononuclear
T184 62-67 NNS denotes cells
T185 67-68 . denotes .
T186 70-82 NNP denotes INTRODUCTION
T187 83-86 DT denotes The
T188 87-97 NN denotes production
T189 98-100 IN denotes of
T190 101-106 NNP denotes TNF-α
T191 107-116 VBG denotes following
T192 117-120 NNP denotes LPS
T193 121-132 NN denotes stimulation
T194 133-135 VBZ denotes is
T195 136-139 CD denotes one
T196 140-142 IN denotes of
T197 143-146 DT denotes the
T198 147-150 JJ denotes key
T199 151-156 NNS denotes steps
T200 157-159 IN denotes in
R80 T182 T184 amod human,cells
R81 T183 T184 compound mononuclear,cells
R82 T184 T181 dobj cells,stimulated
R84 T186 T194 advmod INTRODUCTION,is
R85 T187 T188 det The,production
R86 T188 T194 nsubj production,is
R87 T189 T188 prep of,production
R88 T190 T189 pobj TNF-α,of
R89 T191 T188 prep following,production
R90 T192 T193 compound LPS,stimulation
R91 T193 T191 pobj stimulation,following
R92 T194 T194 ROOT is,is
R93 T195 T194 attr one,is
R94 T196 T195 prep of,one
R95 T197 T199 det the,steps
R96 T198 T199 amod key,steps
R97 T199 T196 pobj steps,of
R98 T200 T199 prep in,steps
R74 T176 T175 pobj lipopolysaccharide,in
R75 T177 T178 punct (,LPS
R76 T178 T176 appos LPS,lipopolysaccharide
R77 T179 T176 punct ),lipopolysaccharide

GO-BP

Id Subject Object Predicate Lexical cue
T827 87-106 http://purl.obolibrary.org/obo/GO_0032680 denotes production of TNF-α
T835 87-106 http://purl.obolibrary.org/obo/GO_0032640 denotes production of TNF-α
T836 87-104 http://purl.obolibrary.org/obo/GO_0032640 denotes production of TNF

GO-CC

Id Subject Object Predicate Lexical cue
T881 62-67 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T114 70-82 Sentence denotes INTRODUCTION
T6 70-82 Sentence denotes INTRODUCTION

events-check-again

Id Subject Object Predicate Lexical cue
T891 87-97 Gene_expression denotes production
T892 101-106 Protein denotes TNF-α
T893 107-116 Positive_regulation denotes following
R652 T891 T893 themeOf production,following
R653 T892 T891 themeOf TNF-α,production

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T927 101-106 Protein denotes TNF-α
T928 87-97 Gene_expression denotes production
T929 121-132 Positive_regulation denotes stimulation
R675 T927 T928 themeOf TNF-α,production
R676 T928 T929 themeOf production,stimulation

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T762 101-104 P01375 denotes TNF
T763 101-106 P01375 denotes TNF-α

test2

Id Subject Object Predicate Lexical cue
T35 87-97 Gene_expression denotes production
T36 101-106 Protein denotes TNF-α
T37 107-116 Positive_regulation denotes following
R21 T35 T37 themeOf production,following
R22 T36 T35 themeOf TNF-α,production